FFCP PHASE1:Hg19::chr7:104844144..104844161,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:104844144..104844161,- to FFCP PHASE1:Hg19::chr7:104844144..104844161,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6733 | |EntrezGene=6733 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11306 | |HGNC=11306 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000476117_5end | |||
|cluster_id=chr7:104844144..104844161,- | |||
|coexpression_cluster_id=C149 | |||
|description=CAGE_peak_7_at_SRPK2_5end | |||
|id=chr7:104844144..104844161,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.19e-07;3!CL:0002567;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.05e-07,3;CL:0002567,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.70e-36;2!UBERON:0005754;3.56e-19;1!UBERON:0006241;1.93e-07;3!UBERON:0003057;1.93e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.89e-09!115;UBERON:0001049!5.37e-07!57;UBERON:0005068!5.37e-07!57;UBERON:0006241!5.37e-07!57;UBERON:0007135!5.37e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.01e-24;3!UBERON:0004054;1.01e-24;3!UBERON:0007029;3.56e-19;1!UBERON:0000998;3.56e-19;1!UBERON:0001301;3.56e-19;1!UBERON:0006868;3.56e-19;1!UBERON:0005904;8.11e-19;4!UBERON:0002021;1.68e-15;5!UBERON:0000058;4.18e-08;10!UBERON:0003135;1.90e-07;11!UBERON:0002240;1.93e-07;3!UBERON:0005174;1.93e-07;3!UBERON:0001137;1.93e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.14e-24,3;UBERON:0004054,1.14e-24,3;UBERON:0007029,2.25e-19,1;UBERON:0000998,2.71e-19,1;UBERON:0006868,2.71e-19,1;UBERON:0001301,5.62e-19,1;UBERON:0005904,8.88e-19,4;UBERON:0002021,1.62e-15,5;UBERON:0000080,6.88e-09,9;UBERON:0002120,6.88e-09,9;UBERON:0004875,6.88e-09,9;UBERON:0005721,6.88e-09,9;UBERON:0005754,6.88e-09,9;UBERON:0007297,6.88e-09,9;UBERON:0002240,1.93e-07,3;UBERON:0005174,1.93e-07,3;UBERON:0001137,1.93e-07,3;UBERON:0003135,1.96e-07,11;UBERON:0004876,1.96e-07,11;UBERON:0003887,6.94e-07,12 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0.25248486685276,0,0,1.17217447210047,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0.508189248444927,0,0,0,0,0,2.99161459204025,0.828831026872071,0.12269149171914,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0.120859449591622,0.200506470303285,0.460404944679482,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.185536196323703,0,0.260427761085233,0,0.724999575434793,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0.221158519862449,0,0.219385397153973,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0,0,0,0.126373159256976,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,1.04836000945218,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0.387956065953678,0.0882561266915003,0.225980740780532,0,0,0.253243183823515,0,0,0.85381197895741,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0,0,0,0,0,2.04365596629566,0.414239055347196,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0.886068179966986,0.244052529803926,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0.344429959321631,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0.425149840203366,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,20.3065200598347,1.26035848110859,0.207471757392654,0.484426936895553,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0.20170506870352,0,0.261906694481422,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0.3414369541879,0,0,0,0.0852134047591577,1.69354820076372,0,0,0,0.223710863595585,0,0.121917924982269,0,0,0,1.94284397223656,0,0.397901550322736,0.118920090777569,0,0.219881033490858,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,5.4945244585842,0,0.187967835959707,0,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0.250707539292375,0.909344378618873,0,0.829169439458779,0.413731983447581,0.213233981900981,0,0.258355639344024,0.124149428591716,0,0,0.202117188958219,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0.25248486685276,0,0,1.17217447210047,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0.508189248444927,0,0,0,0,0,2.99161459204025,0.828831026872071,0.12269149171914,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0.120859449591622,0.200506470303285,0.460404944679482,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.185536196323703,0,0.260427761085233,0,0.724999575434793,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0.221158519862449,0,0.219385397153973,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0,0,0,0.126373159256976,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,1.04836000945218,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0.387956065953678,0.0882561266915003,0.225980740780532,0,0,0.253243183823515,0,0,0.85381197895741,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0,0,0,0,0,2.04365596629566,0.414239055347196,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0.886068179966986,0.244052529803926,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0.344429959321631,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0.425149840203366,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,20.3065200598347,1.26035848110859,0.207471757392654,0.484426936895553,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0.20170506870352,0,0.261906694481422,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0.3414369541879,0,0,0,0.0852134047591577,1.69354820076372,0,0,0,0.223710863595585,0,0.121917924982269,0,0,0,1.94284397223656,0,0.397901550322736,0.118920090777569,0,0.219881033490858,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,5.4945244585842,0,0.187967835959707,0,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0.250707539292375,0.909344378618873,0,0.829169439458779,0.413731983447581,0.213233981900981,0,0.258355639344024,0.124149428591716,0,0,0.202117188958219,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p7@SRPK2 | |||
}} | }} |
Latest revision as of 21:17, 24 September 2015
Short description: | p7@SRPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SRPK2_5end |
Coexpression cluster: | C149_occipital_medial_brain_amygdala_parietal_cerebral_cerebellum |
Association with transcript: | 17bp_to_ENST00000476117_5end |
EntrezGene: | SRPK2 |
HGNC: | 11306 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.05e-07 | 3 |
light melanocyte | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.14e-24 | 3 |
internal male genitalia | 1.14e-24 | 3 |
surface | 2.25e-19 | 1 |
seminal vesicle | 2.71e-19 | 1 |
seminal fluid secreting gland | 2.71e-19 | 1 |
epididymis | 5.62e-19 | 1 |
duct of male reproductive system | 8.88e-19 | 4 |
occipital lobe | 1.62e-15 | 5 |
mesonephros | 6.88e-09 | 9 |
pronephros | 6.88e-09 | 9 |
nephrogenic cord | 6.88e-09 | 9 |
pronephric mesoderm | 6.88e-09 | 9 |
rostral part of nephrogenic cord | 6.88e-09 | 9 |
presumptive pronephric mesoderm | 6.88e-09 | 9 |
spinal cord | 1.93e-07 | 3 |
dorsal region element | 1.93e-07 | 3 |
dorsum | 1.93e-07 | 3 |
male reproductive organ | 1.96e-07 | 11 |
urogenital ridge | 1.96e-07 | 11 |
intraembryonic coelom | 6.94e-07 | 12 |