FFCP PHASE1:Hg19::chr7:142829162..142829176,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:142829162..142829176,+ to FFCP PHASE1:Hg19::chr7:142829162..142829176,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5304 | |EntrezGene=5304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8993 | |HGNC=8993 | ||
|TSSclassifier=strong | |||
|UniProt=P12273 | |UniProt=P12273 | ||
|association_with_transcript=0bp_to_ENST00000291009,NM_002652,uc003wcf.1_5end | |||
|cluster_id=chr7:142829162..142829176,+ | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_1_at_PIP_5end | |||
|id=chr7:142829162..142829176,+ | |||
|ontology_enrichment_celltype=CL:0000359!7.79e-15!32;CL:0000192!1.38e-09!42;CL:0000514!1.38e-09!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!2.20e-12!42;UBERON:0003509!2.20e-12!42;UBERON:0004572!2.20e-12!42;UBERON:0000078!3.02e-12!18;UBERON:0004573!4.30e-12!33;UBERON:0004571!4.30e-12!33;UBERON:0000922!7.23e-11!612;UBERON:0002050!5.85e-10!605;UBERON:0005423!5.85e-10!605;UBERON:0000923!1.31e-09!604;UBERON:0005291!1.31e-09!604;UBERON:0006598!1.31e-09!604;UBERON:0002532!1.31e-09!604;UBERON:0000477!2.55e-09!286;UBERON:0002049!3.22e-09!79;UBERON:0007798!3.22e-09!79;UBERON:0000468!4.66e-09!659;UBERON:0000467!8.56e-09!625;UBERON:0000480!1.02e-08!626;UBERON:0000481!1.03e-08!347;UBERON:0001444!5.70e-08!48;UBERON:0000914!5.71e-08!83;UBERON:0002329!5.71e-08!83;UBERON:0003077!5.71e-08!83;UBERON:0003059!5.71e-08!83;UBERON:0007282!5.71e-08!83;UBERON:0009618!5.71e-08!83;UBERON:0007285!5.71e-08!83;UBERON:0001981!9.49e-08!60;UBERON:0007500!9.49e-08!60;UBERON:0004537!9.49e-08!60;UBERON:0006965!9.49e-08!60;UBERON:0007023!1.13e-07!115;UBERON:0000165!1.59e-07!28;UBERON:0000930!1.59e-07!28;UBERON:0002385!2.44e-07!63;UBERON:0001015!2.44e-07!63;UBERON:0000383!2.44e-07!63;UBERON:0004872!2.87e-07!84;UBERON:0001009!3.26e-07!113;UBERON:0004535!4.34e-07!110;UBERON:0000486!5.84e-07!82;UBERON:0000947!7.02e-07!21;UBERON:0010191!7.02e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.81e-10;28!UBERON:0006947;9.89e-09;3!UBERON:0004054;9.89e-09;3!UBERON:0003135;1.25e-07;11!UBERON:0001044;3.20e-07;6!UBERON:0003293;3.20e-07;6!UBERON:0003294;3.20e-07;6!UBERON:0010047;3.20e-07;6!UBERON:0003408;3.20e-07;6!UBERON:0000167;3.20e-07;6!UBERON:0004573;4.67e-07;33!UBERON:0004571;4.67e-07;33!UBERON:0000153;4.88e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000165,1.10e-11,29;UBERON:0000930,1.10e-11,29;UBERON:0000166,8.54e-10,22;UBERON:0000033,1.08e-09,56;UBERON:0000153,1.54e-09,62;UBERON:0007811,1.54e-09,62;UBERON:0001444,4.39e-09,49;UBERON:0000161,4.56e-09,36;UBERON:0006947,1.03e-08,3;UBERON:0004054,1.03e-08,3;UBERON:0006562,8.59e-08,11;UBERON:0003135,1.14e-07,11;UBERON:0001637,2.06e-07,42;UBERON:0003509,2.06e-07,42;UBERON:0004572,2.06e-07,42;UBERON:0003498,2.12e-07,5;UBERON:0005985,2.12e-07,5;UBERON:0004573,2.19e-07,33;UBERON:0004571,2.19e-07,33;UBERON:0001044,2.88e-07,6;UBERON:0003293,2.88e-07,6;UBERON:0003294,2.88e-07,6;UBERON:0010047,2.88e-07,6;UBERON:0000167,2.88e-07,6;UBERON:0001004,3.16e-07,74;UBERON:0004119,5.86e-07,160;UBERON:0000925,5.86e-07,160;UBERON:0006595,5.86e-07,160 | |||
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| ||
|short_description=p1@PIP | |||
}} | }} |
Latest revision as of 22:40, 16 September 2015
Short description: | p1@PIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PIP_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_ENST00000291009, NM_002652, uc003wcf.1_5end |
EntrezGene: | PIP |
HGNC: | 8993 |
UniProt: | P12273 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mouth | 1.10e-11 | 29 |
stomodeum | 1.10e-11 | 29 |
oral opening | 8.54e-10 | 22 |
head | 1.08e-09 | 56 |
anterior region of body | 1.54e-09 | 62 |
craniocervical region | 1.54e-09 | 62 |
subdivision of head | 4.39e-09 | 49 |
orifice | 4.56e-09 | 36 |
male genital duct | 1.03e-08 | 3 |
internal male genitalia | 1.03e-08 | 3 |
pharynx | 8.59e-08 | 11 |
male reproductive organ | 1.14e-07 | 11 |
artery | 2.06e-07 | 42 |
arterial blood vessel | 2.06e-07 | 42 |
arterial system | 2.06e-07 | 42 |
heart blood vessel | 2.12e-07 | 5 |
coronary vessel | 2.12e-07 | 5 |
systemic artery | 2.19e-07 | 33 |
systemic arterial system | 2.19e-07 | 33 |
saliva-secreting gland | 2.88e-07 | 6 |
gland of oral region | 2.88e-07 | 6 |
gland of foregut | 2.88e-07 | 6 |
oral gland | 2.88e-07 | 6 |
oral cavity | 2.88e-07 | 6 |
respiratory system | 3.16e-07 | 74 |
endoderm-derived structure | 5.86e-07 | 160 |
endoderm | 5.86e-07 | 160 |
presumptive endoderm | 5.86e-07 | 160 |