FFCP PHASE1:Hg19::chr7:73483140..73483149,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr7:73483140..73483149,+ to FFCP PHASE1:Hg19::chr7:73483140..73483149,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2006 | |EntrezGene=2006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3327 | |HGNC=3327 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_M26867_5end | |||
|cluster_id=chr7:73483140..73483149,+ | |||
|coexpression_cluster_id=C379 | |||
|description=CAGE_peak_31_at_ELN_5end | |||
|id=chr7:73483140..73483149,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.13e-14!75;CL:0002334!4.87e-12!12;CL:0002580!1.89e-10!3;CL:0002615!2.73e-10!3;CL:0002620!3.87e-10!23;CL:0002579!6.69e-10!3;CL:0000136!2.20e-09!15;CL:0002617!1.35e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.78e-46;3!CL:0002617;1.08e-31;2!CL:0002615;1.86e-21;3!CL:0002334;1.05e-20;12!CL:0000136;3.02e-19;13!CL:0002581;1.78e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,2.25e-46,3;CL:0002617,6.27e-32,2;CL:0002615,2.67e-21,3;CL:0002334,1.05e-20,12;CL:0000136,9.89e-17,15;CL:0002581,1.41e-16,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.87e-09!5;DOID:450!4.87e-09!5;DOID:66!4.87e-09!5;DOID:423!4.87e-09!5;DOID:0080000!4.87e-09!5;DOID:11722!4.87e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:2513;1.78e-16;1!DOID:3451;6.67e-09;2!DOID:4159;6.67e-09;2!DOID:0060122;6.67e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.93e-16,1;DOID:3451,6.94e-09,2;DOID:4159,6.94e-09,2;DOID:0060122,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.79e-18!6;UBERON:0002358!1.79e-18!6;UBERON:0003684!1.79e-18!6;UBERON:0001178!1.79e-18!6;UBERON:0004457!7.25e-12!12;UBERON:0000042!7.25e-12!12;UBERON:0000310!6.31e-08!10;UBERON:0002097!1.25e-07!40;UBERON:0005406!2.36e-07!2;UBERON:0001443!3.69e-07!11;UBERON:0003102!5.43e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.55e-38;10!UBERON:0001443;7.38e-35;11!UBERON:0007029;7.57e-17;1!UBERON:0000014;2.74e-16;4!UBERON:0003688;3.14e-11;6!UBERON:0002358;3.14e-11;6!UBERON:0003684;3.14e-11;6!UBERON:0001178;3.14e-11;6!UBERON:0003127;6.67e-09;2!UBERON:0005406;6.67e-09;2!UBERON:0004457;8.74e-08;9!UBERON:0000042;8.74e-08;9!UBERON:0000915;1.48e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.19e-38,10;UBERON:0001443,6.42e-35,11;UBERON:0007029,7.57e-17,1;UBERON:0000014,2.85e-16,4;UBERON:0003688,3.75e-11,6;UBERON:0002358,3.75e-11,6;UBERON:0003684,3.75e-11,6;UBERON:0001178,3.75e-11,6;UBERON:0000915,2.03e-10,52;UBERON:0005406,5.94e-09,2;UBERON:0003127,6.42e-09,2;UBERON:0009569,4.07e-08,112 | |||
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|phase1_expression=1.81678379270557,6.20891519283851,3.52386010239928,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,1.5324389789951,0.901428353439581,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0.37223371266318,0.337552664482532,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,2.14846762603287,2.52594084989766,0.896974044789907,0.511707249066704,0.482561763430822,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,1.24415835064723,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4285549652957,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.8453114551668,0.169927114687817,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33064142618405,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p31@ELN | |||
}} | }} |
Latest revision as of 10:53, 19 September 2015
Short description: | p31@ELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_ELN_5end |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | 29bp_to_M26867_5end |
EntrezGene: | ELN |
HGNC: | 3327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 2.25e-46 | 3 |
adipocyte of breast | 6.27e-32 | 2 |
adipocyte of omentum tissue | 2.67e-21 | 3 |
preadipocyte | 1.05e-20 | 12 |
fat cell | 9.89e-17 | 15 |
perirenal preadipocyte | 1.41e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
breast | 2.19e-38 | 10 |
chest | 6.42e-35 | 11 |
surface | 7.57e-17 | 1 |
zone of skin | 2.85e-16 | 4 |
omentum | 3.75e-11 | 6 |
peritoneum | 3.75e-11 | 6 |
abdominal cavity | 3.75e-11 | 6 |
visceral peritoneum | 3.75e-11 | 6 |
thoracic segment of trunk | 2.03e-10 | 52 |
perirenal fat | 5.94e-09 | 2 |
open tracheal system trachea | 6.42e-09 | 2 |
subdivision of trunk | 4.07e-08 | 112 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.93e-16 | 1 |
skin carcinoma | 6.94e-09 | 2 |
skin cancer | 6.94e-09 | 2 |
integumentary system cancer | 6.94e-09 | 2 |