FFCP PHASE1:Hg19::chrX:133931270..133931289,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:133931270..133931289,- to FFCP PHASE1:Hg19::chrX:133931270..133931289,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=159090 | |EntrezGene=159090 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30490 | |HGNC=30490 | ||
|TSSclassifier=strong | |||
|UniProt=F8WA51,B4DN12,G1UD80,Q7Z309 | |UniProt=F8WA51,B4DN12,G1UD80,Q7Z309 | ||
|association_with_transcript=-8bp_to_ENST00000298090,ENST00000394270,NM_001166600,NM_001170757,uc004exv.2,uc011mvp.1_5end | |||
|cluster_id=chrX:133931270..133931289,- | |||
|description=CAGE_peak_4_at_FAM122B_5end | |||
|id=chrX:133931270..133931289,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.89e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.73e-07,25;CL:0002322,9.87e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.30e-32!235;DOID:14566!2.59e-31!239;DOID:0050687!1.63e-17!143;DOID:0050686!1.78e-14!137;DOID:305!3.59e-14!106;DOID:2531!1.84e-10!51;DOID:0060083!1.84e-10!51;DOID:1240!1.19e-07!39;DOID:3095!9.35e-07!22;DOID:2994!9.35e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.51e-09;22!DOID:2994;5.51e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.19e-24,235;DOID:14566,2.59e-23,239;DOID:0050687,4.64e-14,143;DOID:0050686,2.25e-11,137;DOID:305,3.72e-10,106;DOID:3095,4.16e-09,22;DOID:2994,4.16e-09,22;DOID:2531,1.51e-08,51;DOID:0060083,1.51e-08,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.261185628199839,0.491467873003018,0.697801167972428,0.218441372130172,0,0.123766352960047,0,0,0,0,0.487932798790507,1.47745269692145,0.816002764977012,1.25381888591235,1.43117993565528,3.14811177667634,1.00434111675842,0.687720651731561,0.738905305049512,0.708397031823113,0.393364276848904,0,0,0.919421224478927,0.30120591877825,0,1.23947520928483,1.84820002233648,0.880801318004542,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0.764546456250458,0,1.12101712596307,1.05353633910031,2.360517241366,1.17903228824749,0.616804496998528,1.17030546773475,0.977766799900771,1.4203434172042,1.94826728407911,1.00269411196656,0.883817722424512,0.886135578334485,1.08321545506006,1.79327847615945,1.56071217071854,1.15106533222573,0.552700035571697,0.869409257205157,0.593146252648242,1.07016331235885,1.04535523804977,1.47302145506836,0.383220493601921,0.68725489096526,2.02415753615602,0,1.30216690771284,0.950452044448374,0.602300476311091,0.76791966692651,1.24930726552346,0.710331756132051,0,0.604820229674197,1.60464117470104,0.868946423296794,0,1.34140171940727,0.255725123687061,1.44575660953827,0,0.289693037921647,0.795285947051099,0,0.661743720148475,0.443458794925128,1.14185221401064,0.327447688744282,0,1.11235332835329,0,0,0,0.715471872916026,0.571994910780128,0.74291500265913,0,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0,1.10298924103761,0.81014194788176,1.25019619597712,0.673588117878509,2.13961812918312,0,0,0.549605231791222,1.31780417436063,0,0.436094052142534,0,0.379891534993739,0.794455084879313,0.860509862246441,1.41867352879343,0.560677600142307,0,0.49333509683432,0.311211035399766,0.134710672069688,0.653847612453835,0.151357427644931,0,1.17160715916898,0,1.1409436430889,0.149448680551801,1.17434498643765,1.45685649931318,1.96631129383148,0.61246251376468,1.59684612505298,0.309977343527296,0,0.741800787835671,2.73048408581408,0,0.841680569770331,2.12701483782339,1.93944880838928,1.31693286264251,0.919463387397059,0.300476117813194,0.226864366320042,0.717558542755448,0.427114777637135,0.211931901159562,1.50045548042201,0.515262646192195,0.515281080091258,0,1.68776332241266,0.68205903612839,0.757301322732344,0.184099797284599,0.323292113637624,0.355009592516614,0.906768884048762,1.01736355386293,0,0,0.860413786167011,14.8807921478106,12.1927386855766,9.52790331530051,5.59769697083,6.05570042101508,5.47466038613745,0,0,0,0,0,0.828147600278907,0.505754070234305,1.68707720918437,0.330881918197182,0.871517776369625,0.237270619111097,0.539325232640658,0.392442930250692,1.15424147083917,0,0,0,0,0,0,0,8.38779888887836,1.22988438543114,0.857839051492628,0.548751427043128,0,1.00528972411631,0.370353780634118,0.325808305310325,0,0,1.15930404975077,0.117408694235822,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.716468181622786,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0.288239906833923,0.12624243342638,0.317489471460845,0,1.17217447210047,0,0.308482478109971,0,0.285826432630578,2.80327710863402,2.1798003441664,1.3200891447771,0,0,1.690605505112,0,0,1.02882949704857,0,0.532844358032199,0.428933980974443,0,0,1.30294473717494,0.710783897485092,2.37585561880029,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,1.00876629594175,0.394061520403854,0.862510299438069,0.385029108839245,1.77866236955724,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0.737476674166813,0.260650843404249,0,0.343143423810856,0.82707210449155,1.07857100409308,0.640365346820666,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,1.07946785661859,0.177561725313127,0.657017248110473,0,0.929683027679674,2.1754700926492,0.200506470303285,0.368323955743585,0.803701137152247,0.910455840033585,0.262248829918848,0,0.462092022626489,1.56869953835371,1.46139224653261,0.105551628892876,0,0.170093705276516,0.431831832204279,1.54227252690289,0,0.501689773854853,0.509752546090077,0,1.11937377361089,5.04297716285649,3.13722541229881,1.28225062558195,1.31205858279882,0.976135183992909,0.103041011647722,0.640986253728404,0.330037999682352,0.574265537996172,1.95018073810956,0,0,0.924291702687866,0.767518373630648,0.551346289938122,0.429680979473094,0.580066775656914,1.02271952899321,0.356128142586949,0,0,0.510450849978337,0.809262246844399,0,0.31481234683064,0.6970372701606,0,0,0,0.37064843820784,0,0.372158369359667,0,0.762520775695299,0.255897791311334,0.855877976067841,0,0,0.179872457583315,1.09814811894422,0.824686816419805,0,0,0,0.975267478179181,0,0,0.818999468447914,0.707027159768564,0,0.551365343546124,0,0,0.578775534266688,0,0,0.6196469961995,0,0.430234056612155,0.392996164052485,0,0.354761064070598,0.211107635297664,0,0,1.3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| ||
|short_description=p4@FAM122B | |||
}} | }} |
Latest revision as of 13:08, 19 September 2015
Short description: | p4@FAM122B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM122B_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000298090, ENST00000394270, NM_001166600, NM_001170757, uc004exv.2, uc011mvp.1_5end |
EntrezGene: | FAM122B |
HGNC: | 30490 |
UniProt: | F8WA51B4DN12G1UD80Q7Z309 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.73e-07 | 25 |
embryonic stem cell | 9.87e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.19e-24 | 235 |
disease of cellular proliferation | 2.59e-23 | 239 |
cell type cancer | 4.64e-14 | 143 |
organ system cancer | 2.25e-11 | 137 |
carcinoma | 3.72e-10 | 106 |
germ cell and embryonal cancer | 4.16e-09 | 22 |
germ cell cancer | 4.16e-09 | 22 |
hematologic cancer | 1.51e-08 | 51 |
immune system cancer | 1.51e-08 | 51 |