FFCP PHASE1:Mm9::chr10:126732500..126732504,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:126732500..126732504,+ to FFCP PHASE1:Mm9::chr10:126732500..126732504,+: NSchange) |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:126732500..126732504,+ | |||
|description=CAGE_peak_at_chr10:126732500..126732504,+ | |||
|id=chr10:126732500..126732504,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.72e-12!115;CL:0000004!4.72e-12!115;CL:0000255!4.72e-12!115;CL:0000034!7.03e-12!97;CL:0000144!1.12e-11!121;CL:0000012!1.12e-11!121;CL:0000723!4.47e-11!91;CL:0000048!4.47e-11!91;CL:0002371!5.80e-11!118;CL:0002320!8.79e-07!46;CL:0000134!8.79e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,2.24e-16,91;CL:0000048,2.24e-16,91;CL:0000034,5.25e-15,97;CL:0000049,3.56e-13,19;CL:0002320,1.12e-11,46;CL:0000134,1.12e-11,46;CL:0000680,1.24e-11,6;CL:0000187,1.24e-11,6;CL:0000056,1.24e-11,6;CL:0000557,2.68e-10,7;CL:0000222,6.41e-10,7;CL:0000219,1.99e-09,54;CL:0002494,4.44e-09,3;CL:0000737,4.44e-09,3;CL:0000746,4.44e-09,3;CL:0000513,4.44e-09,3;CL:0000988,1.70e-08,32;CL:0002032,1.70e-08,32;CL:0000037,1.70e-08,32;CL:0000837,1.70e-08,32;CL:0002614,2.74e-08,3;CL:0000763,5.93e-08,16;CL:0000355,1.24e-07,9;CL:0002476,3.73e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!8.79e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.22e-12,32;UBERON:0002384,1.12e-11,46;UBERON:0002371,3.91e-10,16;UBERON:0002038,2.74e-08,3;UBERON:0009663,2.74e-08,3;UBERON:0009661,2.74e-08,3;UBERON:0000125,2.74e-08,3;UBERON:0002308,2.74e-08,3;UBERON:0001134,1.24e-07,9;UBERON:0002036,1.24e-07,9;UBERON:0002385,1.24e-07,9;UBERON:0000486,1.24e-07,9;UBERON:0007503,1.24e-07,9;UBERON:0001015,1.24e-07,9;UBERON:0002329,1.24e-07,9;UBERON:0003082,1.24e-07,9;UBERON:0003059,1.24e-07,9;UBERON:0007282,1.24e-07,9;UBERON:0004290,1.24e-07,9;UBERON:0009618,1.24e-07,9;UBERON:0001474,5.31e-07,22;UBERON:0004765,5.31e-07,22;UBERON:0001434,5.31e-07,22;UBERON:0000383,7.87e-07,10 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0,1.81478526784098,0.500895729946347,0.33575854382378,0.934450562382103,0.516493293766305,0.703943610758334,0.468129052643987,1.36974374580404,0.0797721589953364,0.171200729931206,0.34968160967599,0,1.41732687172878,9.09430441566591,0.315462165358238,0.411343300817216,0,0.680346321208558,0.0992909512008853,0.261199789138935,0.319984845586813,0,0,0,0.215471232685889,0,0,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0.588231488031014,0,0,2.64383317748712,1.92616169317078,0.917733760808408,0,0,0.219686182734472,0.777719596297134,0.55994568650145,0,0.503347818173209,0,0.336093799142464,1.54355661621568,2.29226751951005,3.6097046459421,0.404632921719196,0,0.633831403506179,0.677689064138264,0.889294796111139,1.3498495759221,0,0,0.599200221036809,0.768436610643109,0.207379224616955,0.810035629990144,0,0,0.883474163806454,0.244981598429908,0.479227355091182,2.75765635983006,3.30347642998166,0.638436690425939,0.614426133024974,0,0.640413505216868,0,5.30447698102624,1.12552522006336,1.06958773443767,0.294628585473668,0.427115042397309,0.186399445825301,0.454357159999104,0.151143120213571,0.579728977403356,0,1.3599426674155,0,0,0,0.140444420131752,1.36344258062446,2.59786004602869,1.06001872353102,0,1.28326477414318,0,0,0.432982082022428,0,0,0.22836775943812,0,0.890652834388949,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0.41889341362691,0.255457055208591,3.35482348616577,1.79970819298022,1.52484272487678,0.599162557619291,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0.324482526135515,0,0,0,0,0.260240885925407,0,0,0.30140963567143,0,0,0.0937017245597288,0.258703370739016,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,2.1066395619397,2.57347907114715,2.27330799516474,0.207125772535502,0.469052119962192,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,0.420579897128254,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0,0,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0,16.5870412333199,3.80733978673097,0,0,0.160550589987792,0.35163505977661,0.819674726883377,0,0,0.390438744296638,0,0,0,0,1.21443210502468,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0.164970122972535,0,0.485561272309963,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0.178368817602071,0.493647061806363,0,0,0.42366414172764,0.441056796109924,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.556275906031529,0.512612642393558,0,0,0.188368457004691,0.27338845544205,0,0.509935289981566,0.279902904647316,0.276399947608848,0,0,0,0,0,0.655087691238533,0.134864346384821,0.165306911450672,0,0.129614973291793,0,1.69107881605257,0,0,0,0.258319646955462,0,0,0.2604087696879,0.314578033277133,1.20792060413003,0.576060012515731,0.316011120628178,0.202725215290164,0.308132871494482,0,0,0,0.240390899039938,0,0.403865799792591,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.350630706544707,0.226730383615211,0,0.358855426437903,0.335769232728157,0.19318959403219,0,0,0,0,0,0.920650473014354,0,0.515559547031063,2.05524755931193,0.755393897389701,0.675022500231806,2.2516060161211,1.35942722695261,0,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0.697950815278722,0,1.81478526784098,0.500895729946347,0.33575854382378,0.934450562382103,0.516493293766305,0.703943610758334,0.468129052643987,1.36974374580404,0.0797721589953364,0.171200729931206,0.34968160967599,0,1.41732687172878,9.09430441566591,0.315462165358238,0.411343300817216,0,0.680346321208558,0.0992909512008853,0.261199789138935,0.319984845586813,0,0,0,0.215471232685889,0,0,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0.588231488031014,0,0,2.64383317748712,1.92616169317078,0.917733760808408,0,0,0.219686182734472,0.777719596297134,0.55994568650145,0,0.503347818173209,0,0.336093799142464,1.54355661621568,2.29226751951005,3.6097046459421,0.404632921719196,0,0.633831403506179,0.677689064138264,0.889294796111139,1.3498495759221,0,0,0.599200221036809,0.768436610643109,0.207379224616955,0.810035629990144,0,0,0.883474163806454,0.244981598429908,0.479227355091182,2.75765635983006,3.30347642998166,0.638436690425939,0.614426133024974,0,0.640413505216868,0,5.30447698102624,1.12552522006336,1.06958773443767,0.294628585473668,0.427115042397309,0.186399445825301,0.454357159999104,0.151143120213571,0.579728977403356,0,1.3599426674155,0,0,0,0.140444420131752,1.36344258062446,2.59786004602869,1.06001872353102,0,1.28326477414318,0,0,0.432982082022428,0,0,0.22836775943812,0,0.890652834388949,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0.41889341362691,0.255457055208591,3.35482348616577,1.79970819298022,1.52484272487678,0.599162557619291,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0.324482526135515,0,0,0,0,0.260240885925407,0,0,0.30140963567143,0,0,0.0937017245597288,0.258703370739016,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,2.1066395619397,2.57347907114715,2.27330799516474,0.207125772535502,0.469052119962192,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,0.420579897128254,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0,0,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0,16.5870412333199,3.80733978673097,0,0,0.160550589987792,0.35163505977661,0.819674726883377,0,0,0.390438744296638,0,0,0,0,1.21443210502468,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0.164970122972535,0,0.485561272309963,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0.178368817602071,0.493647061806363,0,0,0.42366414172764,0.441056796109924,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.556275906031529,0.512612642393558,0,0,0.188368457004691,0.27338845544205,0,0.509935289981566,0.279902904647316,0.276399947608848,0,0,0,0,0,0.655087691238533,0.134864346384821,0.165306911450672,0,0.129614973291793,0,1.69107881605257,0,0,0,0.258319646955462,0,0,0.2604087696879,0.314578033277133,1.20792060413003,0.576060012515731,0.316011120628178,0.202725215290164,0.308132871494482,0,0,0,0.240390899039938,0,0.403865799792591,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.350630706544707,0.226730383615211,0,0.358855426437903,0.335769232728157,0.19318959403219,0,0,0,0,0,0.920650473014354,0,0.515559547031063,2.05524755931193,0.755393897389701,0.675022500231806,2.2516060161211,1.35942722695261,0,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr10:126732500..126732504,+ | |||
}} | }} |
Latest revision as of 01:09, 4 August 2015
Short description: | p@chr10:126732500..126732504, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126732500..126732504, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 2.24e-16 | 91 |
multi fate stem cell | 2.24e-16 | 91 |
stem cell | 5.25e-15 | 97 |
common myeloid progenitor | 3.56e-13 | 19 |
connective tissue cell | 1.12e-11 | 46 |
mesenchymal cell | 1.12e-11 | 46 |
muscle precursor cell | 1.24e-11 | 6 |
muscle cell | 1.24e-11 | 6 |
myoblast | 1.24e-11 | 6 |
granulocyte monocyte progenitor cell | 2.68e-10 | 7 |
mesodermal cell | 6.41e-10 | 7 |
motile cell | 1.99e-09 | 54 |
cardiocyte | 4.44e-09 | 3 |
striated muscle cell | 4.44e-09 | 3 |
cardiac muscle cell | 4.44e-09 | 3 |
cardiac muscle myoblast | 4.44e-09 | 3 |
hematopoietic cell | 1.70e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.70e-08 | 32 |
hematopoietic stem cell | 1.70e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.70e-08 | 32 |
neuron of the substantia nigra | 2.74e-08 | 3 |
myeloid cell | 5.93e-08 | 16 |
multi-potent skeletal muscle stem cell | 1.24e-07 | 9 |
bone marrow macrophage | 3.73e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.22e-12 | 32 |
connective tissue | 1.12e-11 | 46 |
bone marrow | 3.91e-10 | 16 |
substantia nigra | 2.74e-08 | 3 |
telencephalic nucleus | 2.74e-08 | 3 |
midbrain nucleus | 2.74e-08 | 3 |
neural nucleus | 2.74e-08 | 3 |
nucleus of brain | 2.74e-08 | 3 |
skeletal muscle tissue | 1.24e-07 | 9 |
striated muscle tissue | 1.24e-07 | 9 |
muscle tissue | 1.24e-07 | 9 |
multilaminar epithelium | 1.24e-07 | 9 |
epithelial vesicle | 1.24e-07 | 9 |
musculature | 1.24e-07 | 9 |
somite | 1.24e-07 | 9 |
myotome | 1.24e-07 | 9 |
presomitic mesoderm | 1.24e-07 | 9 |
presumptive segmental plate | 1.24e-07 | 9 |
dermomyotome | 1.24e-07 | 9 |
trunk paraxial mesoderm | 1.24e-07 | 9 |
bone element | 5.31e-07 | 22 |
skeletal element | 5.31e-07 | 22 |
skeletal system | 5.31e-07 | 22 |
musculature of body | 7.87e-07 | 10 |