FFCP PHASE1:Mm9::chr7:6659121..6659133,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=438 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:6659121..6659133,- | |||
|description=CAGE_peak_at_chr7:6659121..6659133,- | |||
|id=chr7:6659121..6659133,- | |||
|ontology_enrichment_celltype=CL:0000117!1.98e-09!23;CL:0000337!1.98e-09!23;CL:0000540!6.19e-08!33;CL:0000047!6.19e-08!33;CL:0000031!6.19e-08!33;CL:0000404!6.19e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.17e-38,3;CL:0002612,2.80e-37,3;CL:0000117,8.95e-20,23;CL:0000337,8.95e-20,23;CL:0000540,7.13e-14,33;CL:0000047,7.13e-14,33;CL:0000031,7.13e-14,33;CL:0000404,7.13e-14,33;CL:0000393,8.93e-12,39;CL:0000211,8.93e-12,39;CL:0002319,1.06e-10,43;CL:0000221,1.85e-10,44;CL:0000133,1.85e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.17e-38,3;UBERON:0002275,1.17e-38,3;UBERON:0002257,2.80e-37,3;UBERON:0001948,9.72e-23,5;UBERON:0002315,9.72e-23,5;UBERON:0002240,4.31e-19,6;UBERON:0005174,4.31e-19,6;UBERON:0001137,4.31e-19,6;UBERON:0003076,6.36e-10,12;UBERON:0003057,6.36e-10,12;UBERON:0000073,1.49e-08,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0,0,0.367472397644862,0.0958454710182364,0,12.1127469099328,6.76742891851495,11.5204899942183,0.527545150920775,0.640413505216868,0.52091337055676,0.837548997004143,0.56276261003168,0,5.30331453852602,3.84403538157578,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0,0.150722640552623,0,0,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.203678727700633,0,0,0,0.130120442962704,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0.648540907100142,0,4.31304619582064,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0.790575555893047,0,0,0.178065603667255,0,0,0,0.971122544619926,0.906970670894253,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0,0,0.42366414172764,0,0,0.161464426695906,0,0.358117032009409,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0.388902376688095,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0.207574695168353,0,0.341467211508268,0,0,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0,0,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.25384382367503,0,0.526139422875686,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0.57386499620653,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0,0,0.367472397644862,0.0958454710182364,0,12.1127469099328,6.76742891851495,11.5204899942183,0.527545150920775,0.640413505216868,0.52091337055676,0.837548997004143,0.56276261003168,0,5.30331453852602,3.84403538157578,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0,0.150722640552623,0,0,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.203678727700633,0,0,0,0.130120442962704,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0.648540907100142,0,4.31304619582064,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0.790575555893047,0,0,0.178065603667255,0,0,0,0.971122544619926,0.906970670894253,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0,0,0.42366414172764,0,0,0.161464426695906,0,0.358117032009409,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0.388902376688095,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0.207574695168353,0,0.341467211508268,0,0,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0,0,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.25384382367503,0,0.526139422875686,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0.57386499620653,0,0 | ||
|short_description=p@chr7:6659121..6659133,- | |||
}} | }} |
Latest revision as of 11:30, 5 August 2015
Short description: | p@chr7:6659121..6659133, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:6659121..6659133, - |
Coexpression cluster: | MCL_coexpression_mm9:438 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.17e-38 | 3 |
neuron of the ventral spinal cord | 2.80e-37 | 3 |
CNS neuron (sensu Vertebrata) | 8.95e-20 | 23 |
neuroblast (sensu Vertebrata) | 8.95e-20 | 23 |
neuron | 7.13e-14 | 33 |
neuronal stem cell | 7.13e-14 | 33 |
neuroblast | 7.13e-14 | 33 |
electrically signaling cell | 7.13e-14 | 33 |
electrically responsive cell | 8.93e-12 | 39 |
electrically active cell | 8.93e-12 | 39 |
neural cell | 1.06e-10 | 43 |
ectodermal cell | 1.85e-10 | 44 |
neurectodermal cell | 1.85e-10 | 44 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.17e-38 | 3 |
reticular formation | 1.17e-38 | 3 |
ventral horn of spinal cord | 2.80e-37 | 3 |
regional part of spinal cord | 9.72e-23 | 5 |
gray matter of spinal cord | 9.72e-23 | 5 |
spinal cord | 4.31e-19 | 6 |
dorsal region element | 4.31e-19 | 6 |
dorsum | 4.31e-19 | 6 |
posterior neural tube | 6.36e-10 | 12 |
chordal neural plate | 6.36e-10 | 12 |
regional part of nervous system | 1.49e-08 | 54 |