FFCP PHASE1:Hg19::chr10:105272249..105272260,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105272249..105272260,+ | |||
|description=CAGE_peak_at_chr10:105272249..105272260,+ | |description=CAGE_peak_at_chr10:105272249..105272260,+ | ||
|id=chr10:105272249..105272260,+ | |id=chr10:105272249..105272260,+ | ||
|ontology_enrichment_celltype=CL:0002536!3.44e-16!2;CL:0000239!3.27e-11!3;CL:1000615!3.27e-11!3;CL:0002306!3.27e-11!3;CL:0002541!5.98e-11!3;CL:0000313!9.02e-09!1;CL:1001319!1.78e-08!1;CL:1000600!1.78e-08!1 | |ontology_enrichment_celltype=CL:0002536!3.44e-16!2;CL:0000239!3.27e-11!3;CL:1000615!3.27e-11!3;CL:0002306!3.27e-11!3;CL:0002541!5.98e-11!3;CL:0000313!9.02e-09!1;CL:1001319!1.78e-08!1;CL:1000600!1.78e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002535;6.30e-26;2!CL:0000239;8.69e-18;3!CL:1000615;8.69e-18;3!CL:0002306;8.69e-18;3!CL:0002149;1.38e-09;6!CL:0002255;1.38e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,9.18e-26,2;CL:0000239,6.76e-18,3;CL:1000615,6.76e-18,3;CL:0002306,6.76e-18,3;CL:0002149,1.32e-09,6;CL:0002255,1.32e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.10e-50;1!UBERON:0005795;8.54e-21;10!UBERON:0004872;2.11e-08;7 | |||
|ontology_enrichment_disease=DOID:1749!3.19e-13!14;DOID:2152!9.02e-09!1;DOID:305!6.08e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:4362;3.10e-11;5!DOID:3001;1.38e-09;6!DOID:120;2.13e-08;27!DOID:193;6.90e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.60e-11,5;DOID:3001,1.32e-09,6;DOID:120,2.22e-08,27;DOID:193,7.15e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.05e-13!14;UBERON:0000158!2.05e-13!14;UBERON:0006853!3.27e-11!3;UBERON:0007685!3.27e-11!3;UBERON:0004134!3.27e-11!3;UBERON:0000476!5.98e-11!3;UBERON:0000920!5.98e-11!3;UBERON:0003124!2.47e-10!7;UBERON:0004911!9.02e-09!1;UBERON:0000997!9.74e-09!1;UBERON:0005056!9.74e-09!1;UBERON:0001301!1.32e-08!1;UBERON:0004645!1.78e-08!1;UBERON:0001256!1.78e-08!1;UBERON:0001259!1.78e-08!1;UBERON:0007190!2.06e-08!1;UBERON:0000489!8.79e-08!32;UBERON:0000478!9.70e-08!24;UBERON:0004923!2.80e-07!57;UBERON:0006555!3.36e-07!17;UBERON:0005103!3.36e-07!17;UBERON:0000083!3.36e-07!17;UBERON:0009201!3.36e-07!17;UBERON:0004819!3.36e-07!17;UBERON:0006553!3.36e-07!17;UBERON:0003074!3.36e-07!17;UBERON:0003060!3.36e-07!17;UBERON:0000058!5.93e-07!26;UBERON:0000080!8.34e-07!18;UBERON:0002120!8.34e-07!18;UBERON:0004875!8.34e-07!18;UBERON:0005721!8.34e-07!18;UBERON:0005754!8.34e-07!18;UBERON:0007297!8.34e-07!18;UBERON:0003350!9.45e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;6.30e-26;2!UBERON:0004801;6.30e-26;2!UBERON:0006853;8.69e-18;3!UBERON:0007685;8.69e-18;3!UBERON:0004134;8.69e-18;3!UBERON:0001987;1.06e-13;4!UBERON:0000995;1.03e-12;17!UBERON:0000474;1.67e-12;37!UBERON:0003975;4.55e-12;18!UBERON:0003100;1.55e-10;41!UBERON:0004175;1.69e-10;21!UBERON:0000002;1.38e-09;6!UBERON:0001560;1.38e-09;6!UBERON:0005156;1.94e-07;59!UBERON:0000990;1.94e-07;59!UBERON:0003134;3.58e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,9.18e-26,2;UBERON:0004801,9.18e-26,2;UBERON:0000995,5.49e-22,21;UBERON:0005795,4.90e-21,22;UBERON:0003975,4.90e-21,22;UBERON:0004175,1.23e-18,25;UBERON:0006853,6.76e-18,3;UBERON:0007685,6.76e-18,3;UBERON:0004134,6.76e-18,3;UBERON:0001987,1.13e-13,4;UBERON:0004340,1.13e-13,4;UBERON:0003134,6.49e-13,37;UBERON:0000474,6.49e-13,37;UBERON:0003100,9.57e-12,41;UBERON:0003133,3.64e-10,48;UBERON:0000002,1.57e-09,6;UBERON:0001560,1.57e-09,6;UBERON:0005156,1.98e-08,59;UBERON:0000990,1.98e-08,59;UBERON:0003124,2.18e-08,7 | |||
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|short_description=p@chr10:105272249..105272260,+ | |short_description=p@chr10:105272249..105272260,+ | ||
}} | }} |
Latest revision as of 10:00, 23 July 2015
Short description: | p@chr10:105272249..105272260, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105272249..105272260, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 9.18e-26 | 2 |
brush border epithelial cell | 6.76e-18 | 3 |
kidney cortex tubule cell | 6.76e-18 | 3 |
epithelial cell of proximal tubule | 6.76e-18 | 3 |
epithelial cell of uterus | 1.32e-09 | 6 |
stromal cell of endometrium | 1.32e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 9.18e-26 | 2 |
cervix epithelium | 9.18e-26 | 2 |
uterus | 5.49e-22 | 21 |
embryonic uterus | 4.90e-21 | 22 |
internal female genitalia | 4.90e-21 | 22 |
internal genitalia | 1.23e-18 | 25 |
renal cortex tubule | 6.76e-18 | 3 |
region of nephron tubule | 6.76e-18 | 3 |
proximal tubule | 6.76e-18 | 3 |
placenta | 1.13e-13 | 4 |
allantois | 1.13e-13 | 4 |
female reproductive organ | 6.49e-13 | 37 |
female reproductive system | 6.49e-13 | 37 |
female organism | 9.57e-12 | 41 |
reproductive organ | 3.64e-10 | 48 |
uterine cervix | 1.57e-09 | 6 |
neck of organ | 1.57e-09 | 6 |
reproductive structure | 1.98e-08 | 59 |
reproductive system | 1.98e-08 | 59 |
chorion | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.60e-11 | 5 |
female reproductive endometrioid cancer | 1.32e-09 | 6 |
female reproductive organ cancer | 2.22e-08 | 27 |
reproductive organ cancer | 7.15e-08 | 29 |