FFCP PHASE1:Hg19::chr10:135074946..135074978,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:135074946..135074978,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr10:135074946..135074978,+ | |description=CAGE_peak_at_chr10:135074946..135074978,+ | ||
|id=chr10:135074946..135074978,+ | |id=chr10:135074946..135074978,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.73e-23!140;CL:0002087!3.86e-20!119;CL:0002031!2.20e-19!124;CL:0000037!4.99e-18!172;CL:0000566!4.99e-18!172;CL:0000988!2.62e-17!182;CL:0002032!5.50e-16!165;CL:0000837!5.50e-16!165;CL:0002393!3.59e-12!9;CL:0002397!3.59e-12!9;CL:0000542!1.33e-11!53;CL:0000051!1.33e-11!53;CL:0000838!5.42e-11!52;CL:0000557!2.04e-09!71;CL:0000766!3.87e-09!76;CL:0000624!4.52e-09!6;CL:0002009!1.88e-08!65;CL:0000839!5.21e-08!70;CL:0000791!7.53e-08!18;CL:0000789!7.53e-08!18;CL:0002420!7.53e-08!18;CL:0002419!7.53e-08!18;CL:0000790!7.53e-08!18;CL:0000840!8.94e-08!5;CL:0001029!8.94e-08!5;CL:0002194!2.66e-07!63;CL:0000576!2.66e-07!63;CL:0000040!2.66e-07!63;CL:0000559!2.66e-07!63;CL:0000084!9.76e-07!25;CL:0000827!9.76e-07!25 | |ontology_enrichment_celltype=CL:0000738!4.73e-23!140;CL:0002087!3.86e-20!119;CL:0002031!2.20e-19!124;CL:0000037!4.99e-18!172;CL:0000566!4.99e-18!172;CL:0000988!2.62e-17!182;CL:0002032!5.50e-16!165;CL:0000837!5.50e-16!165;CL:0002393!3.59e-12!9;CL:0002397!3.59e-12!9;CL:0000542!1.33e-11!53;CL:0000051!1.33e-11!53;CL:0000838!5.42e-11!52;CL:0000557!2.04e-09!71;CL:0000766!3.87e-09!76;CL:0000624!4.52e-09!6;CL:0002009!1.88e-08!65;CL:0000839!5.21e-08!70;CL:0000791!7.53e-08!18;CL:0000789!7.53e-08!18;CL:0002420!7.53e-08!18;CL:0002419!7.53e-08!18;CL:0000790!7.53e-08!18;CL:0000840!8.94e-08!5;CL:0001029!8.94e-08!5;CL:0002194!2.66e-07!63;CL:0000576!2.66e-07!63;CL:0000040!2.66e-07!63;CL:0000559!2.66e-07!63;CL:0000084!9.76e-07!25;CL:0000827!9.76e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000623;3.54e-21;3!CL:0000226;6.69e-20;3!CL:0000842;6.69e-20;3!CL:0000791;6.32e-13;18!CL:0000789;6.32e-13;18!CL:0002419;6.32e-13;18!CL:0000624;1.59e-10;6!CL:0002393;2.23e-10;6!CL:0002397;2.23e-10;6!CL:0000542;3.56e-10;53!CL:0000767;2.11e-09;3!CL:0000784;2.11e-09;3!CL:0000084;3.79e-09;25!CL:0002591;1.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.79e-25,136;CL:0000623,3.55e-21,3;CL:0000825,3.55e-21,3;CL:0000226,6.50e-20,3;CL:0000842,6.50e-20,3;CL:0000037,1.75e-19,168;CL:0002087,9.88e-19,115;CL:0000988,2.96e-18,177;CL:0000838,2.70e-16,52;CL:0000542,6.05e-16,53;CL:0000051,6.05e-16,53;CL:0002031,7.88e-16,120;CL:0002032,1.06e-13,161;CL:0000837,1.06e-13,161;CL:0000791,5.46e-13,18;CL:0000789,5.46e-13,18;CL:0002420,5.46e-13,18;CL:0002419,5.46e-13,18;CL:0000790,5.46e-13,18;CL:0000624,1.23e-10,6;CL:0000767,1.78e-09,3;CL:0000784,1.78e-09,3;CL:0000084,3.42e-09,25;CL:0000827,3.42e-09,25;CL:0002591,1.35e-07,1;CL:0002393,4.06e-07,9;CL:0002397,4.06e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;6.32e-13;18!CL:0000051;3.56e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.13e-11!102;UBERON:0003061!9.13e-11!102;UBERON:0002193!2.36e-09!112;UBERON:0002371!2.07e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr10:135074946..135074978,+ | |short_description=p@chr10:135074946..135074978,+ | ||
}} | }} |
Latest revision as of 11:50, 23 July 2015
Short description: | p@chr10:135074946..135074978, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:135074946..135074978, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.79e-25 | 136 |
natural killer cell | 3.55e-21 | 3 |
pro-NK cell | 3.55e-21 | 3 |
single nucleate cell | 6.50e-20 | 3 |
mononuclear cell | 6.50e-20 | 3 |
hematopoietic stem cell | 1.75e-19 | 168 |
nongranular leukocyte | 9.88e-19 | 115 |
hematopoietic cell | 2.96e-18 | 177 |
lymphoid lineage restricted progenitor cell | 2.70e-16 | 52 |
lymphocyte | 6.05e-16 | 53 |
common lymphoid progenitor | 6.05e-16 | 53 |
hematopoietic lineage restricted progenitor cell | 7.88e-16 | 120 |
hematopoietic oligopotent progenitor cell | 1.06e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-13 | 161 |
mature alpha-beta T cell | 5.46e-13 | 18 |
alpha-beta T cell | 5.46e-13 | 18 |
immature T cell | 5.46e-13 | 18 |
mature T cell | 5.46e-13 | 18 |
immature alpha-beta T cell | 5.46e-13 | 18 |
CD4-positive, alpha-beta T cell | 1.23e-10 | 6 |
basophil | 1.78e-09 | 3 |
plasmacytoid dendritic cell | 1.78e-09 | 3 |
T cell | 3.42e-09 | 25 |
pro-T cell | 3.42e-09 | 25 |
smooth muscle cell of the pulmonary artery | 1.35e-07 | 1 |
intermediate monocyte | 4.06e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.06e-07 | 9 |