FFCP PHASE1:Hg19::chr10:14613950..14613965,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83641 | |EntrezGene=83641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23726 | |HGNC=23726 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000464952_5end | |association_with_transcript=32bp_to_ENST00000464952_5end | ||
|cluster_id=chr10:14613950..14613965,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_11_at_FAM107B_5end | |description=CAGE_peak_11_at_FAM107B_5end | ||
|id=chr10:14613950..14613965,- | |id=chr10:14613950..14613965,- | ||
|ontology_enrichment_celltype=CL:0000791!6.13e-28!18;CL:0000789!6.13e-28!18;CL:0002420!6.13e-28!18;CL:0002419!6.13e-28!18;CL:0000790!6.13e-28!18;CL:0000625!7.84e-20!11;CL:0000084!1.67e-18!25;CL:0000827!1.67e-18!25;CL:0000624!1.03e-11!6;CL:0000838!2.17e-09!52;CL:0000542!4.20e-09!53;CL:0000051!4.20e-09!53;CL:0000738!9.01e-07!140 | |ontology_enrichment_celltype=CL:0000791!6.13e-28!18;CL:0000789!6.13e-28!18;CL:0002420!6.13e-28!18;CL:0002419!6.13e-28!18;CL:0000790!6.13e-28!18;CL:0000625!7.84e-20!11;CL:0000084!1.67e-18!25;CL:0000827!1.67e-18!25;CL:0000624!1.03e-11!6;CL:0000838!2.17e-09!52;CL:0000542!4.20e-09!53;CL:0000051!4.20e-09!53;CL:0000738!9.01e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.96e-59;18!CL:0000789;1.96e-59;18!CL:0002419;1.96e-59;18!CL:0000084;1.46e-41;25!CL:0000625;3.79e-41;11!CL:0000624;1.59e-23;6!CL:0000542;1.04e-12;53!CL:0000898;3.12e-12;3!CL:0000623;3.56e-12;3!CL:0000226;7.30e-12;3!CL:0000842;7.30e-12;3!CL:0000815;1.45e-08;2!CL:0000792;1.45e-08;2!CL:0002677;1.45e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.37e-59,18;CL:0000789,2.37e-59,18;CL:0002420,2.37e-59,18;CL:0002419,2.37e-59,18;CL:0000790,2.37e-59,18;CL:0000084,1.66e-41,25;CL:0000827,1.66e-41,25;CL:0000625,4.19e-41,11;CL:0000838,3.55e-25,52;CL:0000542,1.33e-24,53;CL:0000051,1.33e-24,53;CL:0000624,1.76e-23,6;CL:0002087,1.45e-14,115;CL:0000623,3.12e-12,3;CL:0000825,3.12e-12,3;CL:0000898,3.24e-12,3;CL:0000226,6.17e-12,3;CL:0000842,6.17e-12,3;CL:0000738,2.09e-11,136;CL:0002031,4.60e-10,120;CL:0000815,1.42e-08,2;CL:0000792,1.42e-08,2;CL:0002677,1.42e-08,2;CL:0000037,3.81e-08,168;CL:0000988,1.89e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.96e-59;18!CL:0000051;1.04e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.43e-26!115;UBERON:0001049!1.73e-18!57;UBERON:0005068!1.73e-18!57;UBERON:0006241!1.73e-18!57;UBERON:0007135!1.73e-18!57;UBERON:0002780!1.30e-17!41;UBERON:0001890!1.30e-17!41;UBERON:0006240!1.30e-17!41;UBERON:0003080!4.99e-17!42;UBERON:0002020!5.51e-17!34;UBERON:0003528!5.51e-17!34;UBERON:0001893!1.04e-16!34;UBERON:0002616!4.37e-16!59;UBERON:0002791!8.99e-16!33;UBERON:0000955!2.44e-15!69;UBERON:0006238!2.44e-15!69;UBERON:0001869!1.56e-14!32;UBERON:0001017!1.37e-13!82;UBERON:0003075!8.40e-13!86;UBERON:0007284!8.40e-13!86;UBERON:0000178!1.19e-12!15;UBERON:0000179!1.19e-12!15;UBERON:0000463!1.19e-12!15;UBERON:0005743!1.56e-12!86;UBERON:0002346!8.05e-12!90;UBERON:0000073!1.94e-11!94;UBERON:0001016!1.94e-11!94;UBERON:0002308!7.83e-11!9;UBERON:0000125!7.83e-11!9;UBERON:0002619!8.65e-11!22;UBERON:0003056!1.57e-10!61;UBERON:0000956!3.98e-09!25;UBERON:0000203!3.98e-09!25;UBERON:0001950!1.13e-08!20;UBERON:0009663!4.15e-08!7;UBERON:0002420!5.84e-08!9;UBERON:0007245!5.84e-08!9;UBERON:0010009!5.84e-08!9;UBERON:0010011!5.84e-08!9;UBERON:0000454!5.84e-08!9;UBERON:0000153!8.72e-08!129;UBERON:0007811!8.72e-08!129;UBERON:0002298!6.72e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.75e-27;15!UBERON:0000179;2.75e-27;15!UBERON:0000463;2.75e-27;15!UBERON:0002390;2.10e-11;32!UBERON:0002193;4.23e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.28e-27,15;UBERON:0000179,3.28e-27,15;UBERON:0000463,3.28e-27,15 | |||
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| ||
|short_description=p11@FAM107B | |short_description=p11@FAM107B | ||
}} | }} |
Latest revision as of 07:36, 17 September 2015
Short description: | p11@FAM107B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_FAM107B_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 32bp_to_ENST00000464952_5end |
EntrezGene: | FAM107B |
HGNC: | 23726 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.37e-59 | 18 |
alpha-beta T cell | 2.37e-59 | 18 |
immature T cell | 2.37e-59 | 18 |
mature T cell | 2.37e-59 | 18 |
immature alpha-beta T cell | 2.37e-59 | 18 |
T cell | 1.66e-41 | 25 |
pro-T cell | 1.66e-41 | 25 |
CD8-positive, alpha-beta T cell | 4.19e-41 | 11 |
lymphoid lineage restricted progenitor cell | 3.55e-25 | 52 |
lymphocyte | 1.33e-24 | 53 |
common lymphoid progenitor | 1.33e-24 | 53 |
CD4-positive, alpha-beta T cell | 1.76e-23 | 6 |
nongranular leukocyte | 1.45e-14 | 115 |
natural killer cell | 3.12e-12 | 3 |
pro-NK cell | 3.12e-12 | 3 |
naive T cell | 3.24e-12 | 3 |
single nucleate cell | 6.17e-12 | 3 |
mononuclear cell | 6.17e-12 | 3 |
leukocyte | 2.09e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 4.60e-10 | 120 |
regulatory T cell | 1.42e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.42e-08 | 2 |
naive regulatory T cell | 1.42e-08 | 2 |
hematopoietic stem cell | 3.81e-08 | 168 |
hematopoietic cell | 1.89e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 3.28e-27 | 15 |
haemolymphatic fluid | 3.28e-27 | 15 |
organism substance | 3.28e-27 | 15 |