FFCP PHASE1:Mm9::chr14:54842161..54842174,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=280 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:54842161..54842174,- | |||
|description=CAGE_peak_at_chr14:54842161..54842174,- | |description=CAGE_peak_at_chr14:54842161..54842174,- | ||
|id=chr14:54842161..54842174,- | |id=chr14:54842161..54842174,- | ||
|ontology_enrichment_celltype=CL:0000988!2.04e-34!32;CL:0002032!2.04e-34!32;CL:0000037!2.04e-34!32;CL:0000566!2.04e-34!32;CL:0000837!2.04e-34!32;CL:0000838!2.64e-29!12;CL:0000542!6.93e-27!13;CL:0000051!6.93e-27!13;CL:0000791!1.07e-26!9;CL:0000789!1.07e-26!9;CL:0002420!1.07e-26!9;CL:0002419!1.07e-26!9;CL:0000790!1.07e-26!9;CL:0000084!1.69e-26!11;CL:0000827!1.69e-26!11;CL:0000624!1.19e-23!8;CL:0002320!1.14e-22!46;CL:0000134!1.14e-22!46;CL:0002031!6.06e-21!25;CL:0000738!4.69e-20!17;CL:0002087!4.69e-20!17;CL:0000219!1.09e-18!54;CL:0000063!5.44e-18!66;CL:0000893!1.53e-17!6;CL:0002489!1.53e-17!6;CL:0000898!1.53e-17!6;CL:0000809!1.53e-17!6;CL:0000810!1.53e-17!6;CL:0000895!1.53e-17!6;CL:0000808!1.53e-17!6;CL:0000894!1.53e-17!6;CL:0000806!1.53e-17!6;CL:0000807!1.53e-17!6;CL:0000805!1.53e-17!6;CL:0002425!1.53e-17!6;CL:0002436!1.53e-17!6;CL:0002427!1.53e-17!6;CL:0002428!1.53e-17!6;CL:0002429!1.53e-17!6;CL:0002433!1.53e-17!6;CL:0002431!1.53e-17!6;CL:0002432!1.53e-17!6;CL:0000034!2.21e-12!97;CL:0000049!1.75e-11!19;CL:0000144!3.97e-11!121;CL:0000012!3.97e-11!121;CL:0000723!2.23e-09!91;CL:0000048!2.23e-09!91;CL:0000548!2.20e-08!115;CL:0000004!2.20e-08!115;CL:0000255!2.20e-08!115;CL:0002371!4.69e-08!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.42e-20,9;CL:0000789,2.42e-20,9;CL:0002420,2.42e-20,9;CL:0002419,2.42e-20,9;CL:0000790,2.42e-20,9;CL:0000988,8.57e-18,32;CL:0002032,8.57e-18,32;CL:0000037,8.57e-18,32;CL:0000837,8.57e-18,32;CL:0000084,1.15e-16,11;CL:0000827,1.15e-16,11;CL:0000838,2.76e-15,12;CL:0000624,7.04e-15,8;CL:0000542,4.09e-14,13;CL:0000051,4.09e-14,13;CL:0002320,3.67e-12,46;CL:0000134,3.67e-12,46;CL:0000738,8.39e-11,17;CL:0002087,8.39e-11,17;CL:0000219,3.02e-10,54;CL:0000034,5.48e-10,97;CL:0000625,8.81e-09,1;CL:0000815,1.24e-08,1;CL:0000792,1.24e-08,1;CL:0002031,2.44e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.14e-22!46;UBERON:0002390!3.69e-07!45;UBERON:0003061!3.69e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.67e-12,46 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,2.06597317506522,1.267098499365,0.234064526321993,0.513653904676515,0.159544317990673,1.54080656938085,0.699363219351979,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0.397163804803541,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.838913030288682,7.25362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87556298814209,1.79970819298022,1.52484272487678,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90950388985867,2.79902904647316,1.65839968565309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0.30246421130683,0,0,0,2.06597317506522,1.267098499365,0.234064526321993,0.513653904676515,0.159544317990673,1.54080656938085,0.699363219351979,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0.397163804803541,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.838913030288682,7.25362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87556298814209,1.79970819298022,1.52484272487678,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90950388985867,2.79902904647316,1.65839968565309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:54842161..54842174,- | |short_description=p@chr14:54842161..54842174,- | ||
}} | }} |
Latest revision as of 10:51, 4 August 2015
Short description: | p@chr14:54842161..54842174, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:54842161..54842174, - |
Coexpression cluster: | MCL_coexpression_mm9:280 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.42e-20 | 9 |
alpha-beta T cell | 2.42e-20 | 9 |
immature T cell | 2.42e-20 | 9 |
mature T cell | 2.42e-20 | 9 |
immature alpha-beta T cell | 2.42e-20 | 9 |
hematopoietic cell | 8.57e-18 | 32 |
hematopoietic oligopotent progenitor cell | 8.57e-18 | 32 |
hematopoietic stem cell | 8.57e-18 | 32 |
hematopoietic multipotent progenitor cell | 8.57e-18 | 32 |
T cell | 1.15e-16 | 11 |
pro-T cell | 1.15e-16 | 11 |
lymphoid lineage restricted progenitor cell | 2.76e-15 | 12 |
CD4-positive, alpha-beta T cell | 7.04e-15 | 8 |
lymphocyte | 4.09e-14 | 13 |
common lymphoid progenitor | 4.09e-14 | 13 |
connective tissue cell | 3.67e-12 | 46 |
mesenchymal cell | 3.67e-12 | 46 |
leukocyte | 8.39e-11 | 17 |
nongranular leukocyte | 8.39e-11 | 17 |
motile cell | 3.02e-10 | 54 |
stem cell | 5.48e-10 | 97 |
CD8-positive, alpha-beta T cell | 8.81e-09 | 1 |
regulatory T cell | 1.24e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.24e-08 | 1 |
hematopoietic lineage restricted progenitor cell | 2.44e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.67e-12 | 46 |