FFCP PHASE1:Mm9::chr16:37831653..37831668,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3044 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:37831653..37831668,+ | |||
|description=CAGE_peak_at_chr16:37831653..37831668,+ | |description=CAGE_peak_at_chr16:37831653..37831668,+ | ||
|id=chr16:37831653..37831668,+ | |id=chr16:37831653..37831668,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.63e-12,6;CL:0000187,7.63e-12,6;CL:0000056,7.63e-12,6;CL:0000222,4.29e-10,7;CL:0002494,1.56e-09,3;CL:0000737,1.56e-09,3;CL:0000746,1.56e-09,3;CL:0000513,1.56e-09,3;CL:0000355,9.34e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.32e-09!23;UBERON:0001009!1.32e-09!23;UBERON:0004872!1.10e-08!33;UBERON:0007100!7.54e-08!18;UBERON:0000948!7.54e-08!18;UBERON:0005498!7.54e-08!18;UBERON:0004140!7.54e-08!18;UBERON:0009881!7.54e-08!18;UBERON:0004141!7.54e-08!18;UBERON:0003084!7.54e-08!18;UBERON:0007005!7.54e-08!18;UBERON:0004139!7.54e-08!18;UBERON:0004291!7.54e-08!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,6.65e-14,23;UBERON:0001009,6.65e-14,23;UBERON:0007100,1.55e-12,18;UBERON:0000948,1.55e-12,18;UBERON:0005498,1.55e-12,18;UBERON:0004140,1.55e-12,18;UBERON:0009881,1.55e-12,18;UBERON:0004141,1.55e-12,18;UBERON:0003084,1.55e-12,18;UBERON:0007005,1.55e-12,18;UBERON:0004139,1.55e-12,18;UBERON:0004291,1.55e-12,18;UBERON:0007524,6.89e-12,11;UBERON:0003077,6.89e-12,11;UBERON:0007285,6.89e-12,11;UBERON:0004872,1.30e-10,33;UBERON:0003914,6.48e-08,47;UBERON:0001134,9.34e-08,9;UBERON:0002036,9.34e-08,9;UBERON:0002385,9.34e-08,9;UBERON:0000486,9.34e-08,9;UBERON:0007503,9.34e-08,9;UBERON:0001015,9.34e-08,9;UBERON:0002329,9.34e-08,9;UBERON:0003082,9.34e-08,9;UBERON:0003059,9.34e-08,9;UBERON:0007282,9.34e-08,9;UBERON:0004290,9.34e-08,9;UBERON:0009618,9.34e-08,9;UBERON:0000383,6.15e-07,10 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,2.39203954153597,1.62203089951223,0.917733760808408,0.782391344348039,2.8343270329458,0.219686182734472,1.74986909166855,1.95980990275508,0,0,0,0,6.94600477297057,5.44413535883638,2.57836046138721,0,0,0,1.69422266034566,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,0.207379224616955,0,0.210324961351382,0,0.441737081903227,0,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.457438218012048,0,0.279182999001381,0.56276261003168,0.30559649555362,1.17851434189467,0.142371680799103,0.559198337475902,0.302904773332736,0.453429360640713,0.289864488701678,0.860423876981386,0,0,0,0,0,3.91989741929533,2.59786004602869,1.7666978725517,3.52108549441701,1.28326477414318,0,0,0,0,0,0,0,0,0.173485326766136,0.913396434936424,0,0.301445281105245,0.705532242814229,0.125666591329675,0,0.433798070759735,0,0.808834249737046,0.662524555381181,0.969750506270444,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.916554274652847,0,0,0,0.650602214813519,0,0.540186389416048,1.80845781402858,0.544291993210623,0.896796041993948,0.562210347358373,0.776110112217047,0.431135985865684,0.189106080167819,0.351902248327898,0.657587197282725,2.78047249225598,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0,0.828503090142008,1.17263029990548,1.2604344302271,1.18372367792605,0.983821158737019,1.23413690309903,1.16266972375204,1.07309360559848,0.350296027101508,1.31647879930784,0.985004784474571,0.486412857275134,0.146199987425332,0.439100230582101,0,0,0.102904612379284,0,0,0,0.928946687441754,0.257734922644187,0,0,0.190225626112559,0,0.658795818896044,0.754005626400808,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0,0,0.610953983535943,1.74557238450863,0.561086559122548,0.505892296994058,0,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,7.18841032636773,1.11642284300551,0.312037673114561,0,0,0,0,0.189491411770485,0.325929952884052,0.678980343100753,0.469380496577004,0.335012514883631,0.476087281772027,0.975668239288994,0.472905432318573,1.55025282754142,0.797273843287435,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0.160550589987792,0.234423373184406,0.983609672260053,0.252470927204373,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0,0.283880170416537,0.178065603667255,0.81443479676788,0.329940245945071,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0.720244376125241,0.258717367565509,0.643011105094777,0.709360934569094,0.356737635204141,0.987294123612726,0.913394847343798,0.469343416127421,0.42366414172764,0,0.16488625294148,1.13025098687134,0.482503399425247,0.358117032009409,0.164140899745061,0,0,0,0.412773735926445,1.29636169158798,0.188368457004691,0,0.457556346413045,0,0,0,0,0,0.203319467126849,0.86404272657441,0.627264888043406,0.87345025498471,0.809186078308924,0.165306911450672,0.523511883968059,0.388844919875379,0,0,0,0.165458490457098,0.194451188344048,0.516639293910924,0.844780627453891,0.58678619322877,0.2604087696879,0,0.483168241652012,0.288030006257865,0,0,0.308132871494482,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,1.19707462020309,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.468207537349412,0.576226371643824,0.631790158511746,0,0,0.38581844092741,0.412085900803307,0.588795680537589,0.685738504770831,0.532427418478012,0.715308569841963,0.436039249896986,0.752875043322645,0.930760686808441,0.73171189149109,0.789209134313529,0.814824683075171,0.561142271657738,0.474540072496697,0.591026894253381,0.818462086339379,0.464810523557898,0.192906610981141,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,2.39203954153597,1.62203089951223,0.917733760808408,0.782391344348039,2.8343270329458,0.219686182734472,1.74986909166855,1.95980990275508,0,0,0,0,6.94600477297057,5.44413535883638,2.57836046138721,0,0,0,1.69422266034566,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,0.207379224616955,0,0.210324961351382,0,0.441737081903227,0,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.457438218012048,0,0.279182999001381,0.56276261003168,0.30559649555362,1.17851434189467,0.142371680799103,0.559198337475902,0.302904773332736,0.453429360640713,0.289864488701678,0.860423876981386,0,0,0,0,0,3.91989741929533,2.59786004602869,1.7666978725517,3.52108549441701,1.28326477414318,0,0,0,0,0,0,0,0,0.173485326766136,0.913396434936424,0,0.301445281105245,0.705532242814229,0.125666591329675,0,0.433798070759735,0,0.808834249737046,0.662524555381181,0.969750506270444,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.916554274652847,0,0,0,0.650602214813519,0,0.540186389416048,1.80845781402858,0.544291993210623,0.896796041993948,0.562210347358373,0.776110112217047,0.431135985865684,0.189106080167819,0.351902248327898,0.657587197282725,2.78047249225598,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0,0.828503090142008,1.17263029990548,1.2604344302271,1.18372367792605,0.983821158737019,1.23413690309903,1.16266972375204,1.07309360559848,0.350296027101508,1.31647879930784,0.985004784474571,0.486412857275134,0.146199987425332,0.439100230582101,0,0,0.102904612379284,0,0,0,0.928946687441754,0.257734922644187,0,0,0.190225626112559,0,0.658795818896044,0.754005626400808,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0,0,0.610953983535943,1.74557238450863,0.561086559122548,0.505892296994058,0,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,7.18841032636773,1.11642284300551,0.312037673114561,0,0,0,0,0.189491411770485,0.325929952884052,0.678980343100753,0.469380496577004,0.335012514883631,0.476087281772027,0.975668239288994,0.472905432318573,1.55025282754142,0.797273843287435,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0.160550589987792,0.234423373184406,0.983609672260053,0.252470927204373,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0,0.283880170416537,0.178065603667255,0.81443479676788,0.329940245945071,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0.720244376125241,0.258717367565509,0.643011105094777,0.709360934569094,0.356737635204141,0.987294123612726,0.913394847343798,0.469343416127421,0.42366414172764,0,0.16488625294148,1.13025098687134,0.482503399425247,0.358117032009409,0.164140899745061,0,0,0,0.412773735926445,1.29636169158798,0.188368457004691,0,0.457556346413045,0,0,0,0,0,0.203319467126849,0.86404272657441,0.627264888043406,0.87345025498471,0.809186078308924,0.165306911450672,0.523511883968059,0.388844919875379,0,0,0,0.165458490457098,0.194451188344048,0.516639293910924,0.844780627453891,0.58678619322877,0.2604087696879,0,0.483168241652012,0.288030006257865,0,0,0.308132871494482,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,1.19707462020309,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.468207537349412,0.576226371643824,0.631790158511746,0,0,0.38581844092741,0.412085900803307,0.588795680537589,0.685738504770831,0.532427418478012,0.715308569841963,0.436039249896986,0.752875043322645,0.930760686808441,0.73171189149109,0.789209134313529,0.814824683075171,0.561142271657738,0.474540072496697,0.591026894253381,0.818462086339379,0.464810523557898,0.192906610981141,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p@chr16:37831653..37831668,+ | |short_description=p@chr16:37831653..37831668,+ | ||
}} | }} |
Latest revision as of 10:06, 6 August 2015
Short description: | p@chr16:37831653..37831668, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:37831653..37831668, + |
Coexpression cluster: | MCL_coexpression_mm9:3044 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.63e-12 | 6 |
muscle cell | 7.63e-12 | 6 |
myoblast | 7.63e-12 | 6 |
mesodermal cell | 4.29e-10 | 7 |
cardiocyte | 1.56e-09 | 3 |
striated muscle cell | 1.56e-09 | 3 |
cardiac muscle cell | 1.56e-09 | 3 |
cardiac muscle myoblast | 1.56e-09 | 3 |
multi-potent skeletal muscle stem cell | 9.34e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 6.65e-14 | 23 |
circulatory system | 6.65e-14 | 23 |
primary circulatory organ | 1.55e-12 | 18 |
heart | 1.55e-12 | 18 |
primitive heart tube | 1.55e-12 | 18 |
primary heart field | 1.55e-12 | 18 |
anterior lateral plate mesoderm | 1.55e-12 | 18 |
heart tube | 1.55e-12 | 18 |
heart primordium | 1.55e-12 | 18 |
cardiac mesoderm | 1.55e-12 | 18 |
cardiogenic plate | 1.55e-12 | 18 |
heart rudiment | 1.55e-12 | 18 |
dense mesenchyme tissue | 6.89e-12 | 11 |
paraxial mesoderm | 6.89e-12 | 11 |
presumptive paraxial mesoderm | 6.89e-12 | 11 |
splanchnic layer of lateral plate mesoderm | 1.30e-10 | 33 |
epithelial tube | 6.48e-08 | 47 |
skeletal muscle tissue | 9.34e-08 | 9 |
striated muscle tissue | 9.34e-08 | 9 |
muscle tissue | 9.34e-08 | 9 |
multilaminar epithelium | 9.34e-08 | 9 |
epithelial vesicle | 9.34e-08 | 9 |
musculature | 9.34e-08 | 9 |
somite | 9.34e-08 | 9 |
myotome | 9.34e-08 | 9 |
presomitic mesoderm | 9.34e-08 | 9 |
presumptive segmental plate | 9.34e-08 | 9 |
dermomyotome | 9.34e-08 | 9 |
trunk paraxial mesoderm | 9.34e-08 | 9 |
musculature of body | 6.15e-07 | 10 |