FFCP PHASE1:Mm9::chr13:47161817..47161832,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=218214 | |EntrezGene=218214 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=95 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CIG3 | |UniProt=Q8CIG3 | ||
|association_with_transcript=0bp_to_ENSMUST00000128977,uc011yyy.1_5end | |association_with_transcript=0bp_to_ENSMUST00000128977,uc011yyy.1_5end | ||
|cluster_id=chr13:47161817..47161832,+ | |||
|description=CAGE_peak_2_at_Kdm1b_5end | |description=CAGE_peak_2_at_Kdm1b_5end | ||
|id=chr13:47161817..47161832,+ | |id=chr13:47161817..47161832,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!9.97e-12!59;UBERON:0000160!5.95e-08!43;UBERON:0004921!5.37e-07!126;UBERON:0004185!5.37e-07!126;UBERON:0004119!5.52e-07!130;UBERON:0000925!5.52e-07!130;UBERON:0006595!5.52e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.03e-24,47;UBERON:0000160,3.72e-13,31;UBERON:0000945,1.78e-11,16;UBERON:0010039,1.78e-11,16;UBERON:0004921,1.77e-10,114;UBERON:0001007,3.08e-10,116;UBERON:0001555,3.08e-10,116;UBERON:0007026,3.08e-10,116;UBERON:0004119,5.27e-10,118;UBERON:0000925,5.27e-10,118;UBERON:0006595,5.27e-10,118;UBERON:0001155,3.18e-09,2;UBERON:0000059,3.18e-09,2;UBERON:0010147,6.02e-09,2;UBERON:0003937,6.02e-09,2;UBERON:0005399,6.02e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,9.31958806090611,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32225283331772,0,0.464473343720877,0.644337306610467,0.201683524623343,0.889512175379481,1.14135375667535,1.89811624617805,0.988193728344065,0.754005626400808,2.58643413653496,2.33956904542944,3.59527763461689,4.97117514711797,2.98711909881551,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0,0,0,0,0,0.516856586336442,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,5.73373834942901,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,9.54670618015114,0,0.406638934253697,1.51207477150522,1.04544148007234,0,3.77620169877498,5.2898211664215,9.16145796944104,12.1838074894285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,52.5475695767558,3.75364950902364,0.549454872801795,0.643105137237198,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,1.2673964994512,0.188626341386076,0.0936415074698824,0.192075457214608,0.34461281373368,0.476293691283074,0.347652977834566,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0,0.376437521661322,0.169229215783353,0.182927972872773,0.526139422875686,0,0,0.474540072496697,0.197008964751127,0.409231043169689,0,0,0,0.467863216890817,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,9.31958806090611,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32225283331772,0,0.464473343720877,0.644337306610467,0.201683524623343,0.889512175379481,1.14135375667535,1.89811624617805,0.988193728344065,0.754005626400808,2.58643413653496,2.33956904542944,3.59527763461689,4.97117514711797,2.98711909881551,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0,0,0,0,0,0.516856586336442,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,5.73373834942901,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,9.54670618015114,0,0.406638934253697,1.51207477150522,1.04544148007234,0,3.77620169877498,5.2898211664215,9.16145796944104,12.1838074894285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,52.5475695767558,3.75364950902364,0.549454872801795,0.643105137237198,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,1.2673964994512,0.188626341386076,0.0936415074698824,0.192075457214608,0.34461281373368,0.476293691283074,0.347652977834566,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0,0.376437521661322,0.169229215783353,0.182927972872773,0.526139422875686,0,0,0.474540072496697,0.197008964751127,0.409231043169689,0,0,0,0.467863216890817,0,0,0,0 | ||
|short_description=p2@Kdm1b | |short_description=p2@Kdm1b | ||
}} | }} |
Latest revision as of 16:13, 1 October 2015
Short description: | p2@Kdm1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kdm1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:95 |
Association with transcript: | 0bp_to_ENSMUST00000128977, uc011yyy.1_5end |
EntrezGene: | Kdm1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 8.03e-24 | 47 |
intestine | 3.72e-13 | 31 |
stomach | 1.78e-11 | 16 |
food storage organ | 1.78e-11 | 16 |
subdivision of digestive tract | 1.77e-10 | 114 |
digestive system | 3.08e-10 | 116 |
digestive tract | 3.08e-10 | 116 |
primitive gut | 3.08e-10 | 116 |
endoderm-derived structure | 5.27e-10 | 118 |
endoderm | 5.27e-10 | 118 |
presumptive endoderm | 5.27e-10 | 118 |
colon | 3.18e-09 | 2 |
large intestine | 3.18e-09 | 2 |
male accessory sex gland | 6.02e-09 | 2 |
sex gland | 6.02e-09 | 2 |
male reproductive gland | 6.02e-09 | 2 |