FFCP PHASE1:Mm9::chr13:89882121..89882136,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13003 | |EntrezGene=13003 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1123 | |||
|TSSclassifier=NA | |||
|UniProt=E9QQ15,E9PYH0,E9QMK2,E9QMK3,G3XA35,Q8BS97,Q62059 | |UniProt=E9QQ15,E9PYH0,E9QMK2,E9QMK3,G3XA35,Q8BS97,Q62059 | ||
|association_with_transcript=-4bp_to_ENSMUST00000022114,NM_001081249,NM_001134474,NM_001134475,NM_019389,NM_172955,uc007rjg.1,uc007rjh.1,uc007rji.2,uc007rjk.2,uc011zck.1_5end | |association_with_transcript=-4bp_to_ENSMUST00000022114,NM_001081249,NM_001134474,NM_001134475,NM_019389,NM_172955,uc007rjg.1,uc007rjh.1,uc007rji.2,uc007rjk.2,uc011zck.1_5end | ||
|cluster_id=chr13:89882121..89882136,- | |||
|description=CAGE_peak_4_at_Vcan_5end | |description=CAGE_peak_4_at_Vcan_5end | ||
|id=chr13:89882121..89882136,- | |id=chr13:89882121..89882136,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,8.91e-07,7;UBERON:0004710,8.91e-07,7;UBERON:0005419,8.91e-07,7;UBERON:0005417,8.91e-07,7;UBERON:0005729,8.91e-07,7 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,1.25559489221072,2.3440060335714,3.14114246384279,0,0,0,0.251793635951155,0.608261587317087,1.28482726513177,0,0,0.219686182734472,0,1.25987779462826,0,0,0,0,1.54355661621568,0.85960031981627,0.515672092277442,2.42779753031517,1.05798195854407,1.26766280701236,1.0165335962074,4.4464739805557,0,0,0,0,0.384218305321555,1.34796496001021,1.75507719831198,2.10324961351382,0.856952953211411,1.54607978666129,2.32732518508413,2.01275489138296,0.919218786610021,0,0.638436690425939,0.153606533256243,1.97829431595291,1.00636407962651,2.08365348222704,0.279182999001381,0.56276261003168,0.61119299110724,1.17851434189467,1.99320353118744,1.1183966749518,1.4387976733305,2.11600368298999,0,0,0,0,0,0,0,1.02258193546835,0.519572009205738,0.70667914902068,0,2.56652954828636,0,0,0,0,0,0,0,0,1.56136794089522,1.21786191324856,1.15307748628029,0.60289056221049,1.88141931417128,0,0.247194967734374,1.15679485535929,0,2.91180329905337,0,0.484875253135222,0,0.878342391034642,0.209446706813455,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,3.64397621127307,0.173824320192276,0,0.20778804455956,0.324482526135515,10.1839363850316,0.746441823660558,0.252722758433675,0.210441855886474,3.90361328888111,4.13823787980251,4.68161537493908,2.10986744970001,1.56483948048054,0.640568601424249,1.49922759295566,0.258703370739016,11.2095356325078,18.3432897762785,16.7153567955751,9.20622076195814,9.17555922444473,5.57203466435466,5.35033554660653,5.37392520409932,0,0,0,16.5700618028402,14.0715635988658,10.6236616261999,11.6004920436753,8.06733350164356,5.39934895105824,4.88321283975857,3.75582761959467,3.61972561338225,2.63295759861569,0.820837320395476,0.56748166682099,0.438599962275997,0.658650345873152,0.536825675041487,0.420579897128254,2.16099685996497,0,0,9.81125952462076,7.19933682767359,3.73715637834071,1.21010114774006,1.33426826306922,0.570676878337677,0,0.658795818896044,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0,1.89667900953082,7.19765629441292,2.25415471346161,7.33144780243131,5.04276466635827,3.7873342740772,0.505892296994058,0.147610147979602,0.156998727841375,0.123397163921801,0,1.16791574001266,1.37591296579242,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,7.01118223550794,6.35563408123901,8.14776411720903,5.16318546234705,4.52266895092903,1.19021820443007,0.585400943573396,1.57635144106191,2.87904096543407,0.956728611944923,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0.275936746304732,0.642202359951168,1.52375192569864,4.91804836130026,0,0.94652465824877,0,0.646270193198397,0,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,0.790575555893047,0,2.41298144854057,6.23229612835393,8.47012188638596,2.47455184458803,0,1.69946445308487,1.51161778482376,1.50884063804718,1.47650946440386,3.07435147943927,3.35956781118687,1.09060118843252,1.42598951353889,0,0,0,0,7.20244376125241,2.71653235943784,3.42939256050548,4.07882537377229,2.85390108163313,4.11372551505302,0.913394847343798,1.17335854031855,0.42366414172764,0.441056796109924,1.31909002353184,2.58343082713449,2.41251699712623,1.3130957840345,1.14898629821543,0,0.370850604021019,0.170870880797853,4.12773735926445,2.96311243791539,0,0,0,0,0,0,0,8.06656783631895,4.47302827679067,3.13215488383224,1.46361807210128,2.18362563746178,1.48350781023303,1.23980183588004,0.523511883968059,0,0.621339313086926,0,3.43888055901151,3.80554528051325,4.083474955225,3.22899558694328,4.22390313726945,3.16864544343536,0.911430693907651,0.209718688851422,0.241584120826006,0,0,2.22997736819181,1.02710957164827,0.25984164595559,0.895133478337407,0.79472541912506,0,0,0.201932899896295,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.269141569828427,0.503653849092235,0.19318959403219,1.12609485270709,0.549454872801795,0.643105137237198,0,0.564751842617067,0.460325236507177,1.14579102687879,0.68741272937475,0,0.755393897389701,0,0.45032120322422,0,0,6.33102820263478,13.167820822234,9.04888110496911,6.07766792670735,1.88651846365184,3.30918315210025,4.4449345560323,4.32673620201678,3.53011130550997,5.30664144703975,4.81610669791456,4.90428487603798,3.55837728385553,3.45735822986294,4.02048282689293,2.85776214769844,3.24476112645595,3.8581844092741,1.64834360321323,3.23837624295674,4.11443102862498,3.90446773550542,5.24559617884106,3.19762116591123,3.48204707536723,3.72304274723377,3.29270351170991,2.89376682581627,3.66671107383827,6.73370725989286,4.1522256343461,3.64466584789585,3.27384834535751,3.25367366490529,2.89359916471712,2.74791635731741,2.57324769289949,2.36358159453128,2.48674831689496,1.32354851471709,1.15933917810211 | |phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,1.25559489221072,2.3440060335714,3.14114246384279,0,0,0,0.251793635951155,0.608261587317087,1.28482726513177,0,0,0.219686182734472,0,1.25987779462826,0,0,0,0,1.54355661621568,0.85960031981627,0.515672092277442,2.42779753031517,1.05798195854407,1.26766280701236,1.0165335962074,4.4464739805557,0,0,0,0,0.384218305321555,1.34796496001021,1.75507719831198,2.10324961351382,0.856952953211411,1.54607978666129,2.32732518508413,2.01275489138296,0.919218786610021,0,0.638436690425939,0.153606533256243,1.97829431595291,1.00636407962651,2.08365348222704,0.279182999001381,0.56276261003168,0.61119299110724,1.17851434189467,1.99320353118744,1.1183966749518,1.4387976733305,2.11600368298999,0,0,0,0,0,0,0,1.02258193546835,0.519572009205738,0.70667914902068,0,2.56652954828636,0,0,0,0,0,0,0,0,1.56136794089522,1.21786191324856,1.15307748628029,0.60289056221049,1.88141931417128,0,0.247194967734374,1.15679485535929,0,2.91180329905337,0,0.484875253135222,0,0.878342391034642,0.209446706813455,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,3.64397621127307,0.173824320192276,0,0.20778804455956,0.324482526135515,10.1839363850316,0.746441823660558,0.252722758433675,0.210441855886474,3.90361328888111,4.13823787980251,4.68161537493908,2.10986744970001,1.56483948048054,0.640568601424249,1.49922759295566,0.258703370739016,11.2095356325078,18.3432897762785,16.7153567955751,9.20622076195814,9.17555922444473,5.57203466435466,5.35033554660653,5.37392520409932,0,0,0,16.5700618028402,14.0715635988658,10.6236616261999,11.6004920436753,8.06733350164356,5.39934895105824,4.88321283975857,3.75582761959467,3.61972561338225,2.63295759861569,0.820837320395476,0.56748166682099,0.438599962275997,0.658650345873152,0.536825675041487,0.420579897128254,2.16099685996497,0,0,9.81125952462076,7.19933682767359,3.73715637834071,1.21010114774006,1.33426826306922,0.570676878337677,0,0.658795818896044,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0,1.89667900953082,7.19765629441292,2.25415471346161,7.33144780243131,5.04276466635827,3.7873342740772,0.505892296994058,0.147610147979602,0.156998727841375,0.123397163921801,0,1.16791574001266,1.37591296579242,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,7.01118223550794,6.35563408123901,8.14776411720903,5.16318546234705,4.52266895092903,1.19021820443007,0.585400943573396,1.57635144106191,2.87904096543407,0.956728611944923,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0.275936746304732,0.642202359951168,1.52375192569864,4.91804836130026,0,0.94652465824877,0,0.646270193198397,0,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,0.790575555893047,0,2.41298144854057,6.23229612835393,8.47012188638596,2.47455184458803,0,1.69946445308487,1.51161778482376,1.50884063804718,1.47650946440386,3.07435147943927,3.35956781118687,1.09060118843252,1.42598951353889,0,0,0,0,7.20244376125241,2.71653235943784,3.42939256050548,4.07882537377229,2.85390108163313,4.11372551505302,0.913394847343798,1.17335854031855,0.42366414172764,0.441056796109924,1.31909002353184,2.58343082713449,2.41251699712623,1.3130957840345,1.14898629821543,0,0.370850604021019,0.170870880797853,4.12773735926445,2.96311243791539,0,0,0,0,0,0,0,8.06656783631895,4.47302827679067,3.13215488383224,1.46361807210128,2.18362563746178,1.48350781023303,1.23980183588004,0.523511883968059,0,0.621339313086926,0,3.43888055901151,3.80554528051325,4.083474955225,3.22899558694328,4.22390313726945,3.16864544343536,0.911430693907651,0.209718688851422,0.241584120826006,0,0,2.22997736819181,1.02710957164827,0.25984164595559,0.895133478337407,0.79472541912506,0,0,0.201932899896295,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.269141569828427,0.503653849092235,0.19318959403219,1.12609485270709,0.549454872801795,0.643105137237198,0,0.564751842617067,0.460325236507177,1.14579102687879,0.68741272937475,0,0.755393897389701,0,0.45032120322422,0,0,6.33102820263478,13.167820822234,9.04888110496911,6.07766792670735,1.88651846365184,3.30918315210025,4.4449345560323,4.32673620201678,3.53011130550997,5.30664144703975,4.81610669791456,4.90428487603798,3.55837728385553,3.45735822986294,4.02048282689293,2.85776214769844,3.24476112645595,3.8581844092741,1.64834360321323,3.23837624295674,4.11443102862498,3.90446773550542,5.24559617884106,3.19762116591123,3.48204707536723,3.72304274723377,3.29270351170991,2.89376682581627,3.66671107383827,6.73370725989286,4.1522256343461,3.64466584789585,3.27384834535751,3.25367366490529,2.89359916471712,2.74791635731741,2.57324769289949,2.36358159453128,2.48674831689496,1.32354851471709,1.15933917810211 | ||
|short_description=p4@Vcan | |short_description=p4@Vcan | ||
}} | }} |
Latest revision as of 23:59, 1 October 2015
Short description: | p4@Vcan |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Vcan_5end |
Coexpression cluster: | MCL_coexpression_mm9:1123 |
Association with transcript: | -4bp_to_ENSMUST00000022114, NM_001081249, NM_001134474, NM_001134475, NM_019389, NM_172955, uc007rjg.1, uc007rjh.1, uc007rji.2, uc007rjk.2, uc011zck.1_5end |
EntrezGene: | Vcan |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
forelimb | 8.91e-07 | 7 |
pectoral appendage | 8.91e-07 | 7 |
pectoral appendage bud | 8.91e-07 | 7 |
forelimb bud | 8.91e-07 | 7 |
forelimb/pectoral fin field | 8.91e-07 | 7 |