FFCP PHASE1:Mm9::chr3:105835811..105835822,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229687 | |EntrezGene=229687 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=A0JP54,Q08EE2 | |UniProt=A0JP54,Q08EE2 | ||
|association_with_transcript=0bp_to_ENSMUST00000168688,uc008qvu.2_5end | |association_with_transcript=0bp_to_ENSMUST00000168688,uc008qvu.2_5end | ||
|cluster_id=chr3:105835811..105835822,- | |||
|description=CAGE_peak_2_at_Chi3l7_5end | |description=CAGE_peak_2_at_Chi3l7_5end | ||
|id=chr3:105835811..105835822,- | |id=chr3:105835811..105835822,- | ||
|ontology_enrichment_celltype=CL:0000791!8.90e-09!9;CL:0000789!8.90e-09!9;CL:0002420!8.90e-09!9;CL:0002419!8.90e-09!9;CL:0000790!8.90e-09!9;CL:0000624!4.69e-07!8;CL:0000084!4.90e-07!11;CL:0000827!4.90e-07!11 | |ontology_enrichment_celltype=CL:0000791!8.90e-09!9;CL:0000789!8.90e-09!9;CL:0002420!8.90e-09!9;CL:0002419!8.90e-09!9;CL:0000790!8.90e-09!9;CL:0000624!4.69e-07!8;CL:0000084!4.90e-07!11;CL:0000827!4.90e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.58e-09,8;CL:0000815,3.65e-09,1;CL:0000792,3.65e-09,1;CL:0000355,8.22e-09,9;CL:0000791,2.41e-08,9;CL:0000789,2.41e-08,9;CL:0002420,2.41e-08,9;CL:0002419,2.41e-08,9;CL:0000790,2.41e-08,9;CL:0000084,6.31e-07,11;CL:0000827,6.31e-07,11 | |||
|ontology_enrichment_disease=DOID:0060100!2.04e-08!3;DOID:4045!2.04e-08!3 | |ontology_enrichment_disease=DOID:0060100!2.04e-08!3;DOID:4045!2.04e-08!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.71e-25,3;DOID:4045,3.71e-25,3;DOID:0050686,6.34e-13,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,8.22e-09,9;UBERON:0002036,8.22e-09,9;UBERON:0002385,8.22e-09,9;UBERON:0000486,8.22e-09,9;UBERON:0007503,8.22e-09,9;UBERON:0001015,8.22e-09,9;UBERON:0002329,8.22e-09,9;UBERON:0003082,8.22e-09,9;UBERON:0003059,8.22e-09,9;UBERON:0007282,8.22e-09,9;UBERON:0004290,8.22e-09,9;UBERON:0009618,8.22e-09,9;UBERON:0002037,8.37e-09,4;UBERON:0002680,8.37e-09,4;UBERON:0001895,8.37e-09,4;UBERON:0010092,8.37e-09,4;UBERON:0006215,8.37e-09,4;UBERON:0000383,5.52e-08,10;UBERON:0007524,2.64e-07,11;UBERON:0003077,2.64e-07,11;UBERON:0007285,2.64e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,1.93684985162364,0.140788722151667,0,0,0,1.54080656938085,1.13646523144697,0,0,0,0,0,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6933662134776,15.626706890476,6.80580867165938,17.6469446409304,14.3439551841274,19.9059244742773,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,2.34224637609238,1.8850203613211,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0.419854356970974,0.276399947608848,0.954670618015114,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192423683280659,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.93684985162364,0.140788722151667,0,0,0,1.54080656938085,1.13646523144697,0,0,0,0,0,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6933662134776,15.626706890476,6.80580867165938,17.6469446409304,14.3439551841274,19.9059244742773,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,2.34224637609238,1.8850203613211,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0.419854356970974,0.276399947608848,0.954670618015114,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192423683280659,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Chi3l7 | |short_description=p2@Chi3l7 | ||
}} | }} |
Latest revision as of 06:15, 27 September 2015
Short description: | p2@Chi3l7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Chi3l7_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000168688, uc008qvu.2_5end |
EntrezGene: | Chi3l7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.58e-09 | 8 |
regulatory T cell | 3.65e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.65e-09 | 1 |
multi-potent skeletal muscle stem cell | 8.22e-09 | 9 |
mature alpha-beta T cell | 2.41e-08 | 9 |
alpha-beta T cell | 2.41e-08 | 9 |
immature T cell | 2.41e-08 | 9 |
mature T cell | 2.41e-08 | 9 |
immature alpha-beta T cell | 2.41e-08 | 9 |
T cell | 6.31e-07 | 11 |
pro-T cell | 6.31e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 8.22e-09 | 9 |
striated muscle tissue | 8.22e-09 | 9 |
muscle tissue | 8.22e-09 | 9 |
multilaminar epithelium | 8.22e-09 | 9 |
epithelial vesicle | 8.22e-09 | 9 |
musculature | 8.22e-09 | 9 |
somite | 8.22e-09 | 9 |
myotome | 8.22e-09 | 9 |
presomitic mesoderm | 8.22e-09 | 9 |
presumptive segmental plate | 8.22e-09 | 9 |
dermomyotome | 8.22e-09 | 9 |
trunk paraxial mesoderm | 8.22e-09 | 9 |
cerebellum | 8.37e-09 | 4 |
regional part of metencephalon | 8.37e-09 | 4 |
metencephalon | 8.37e-09 | 4 |
future metencephalon | 8.37e-09 | 4 |
rhombic lip | 8.37e-09 | 4 |
musculature of body | 5.52e-08 | 10 |
dense mesenchyme tissue | 2.64e-07 | 11 |
paraxial mesoderm | 2.64e-07 | 11 |
presumptive paraxial mesoderm | 2.64e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.71e-25 | 3 |
muscle cancer | 3.71e-25 | 3 |
organ system cancer | 6.34e-13 | 6 |