FFCP PHASE1:Mm9::chr3:108525199..108525229,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76123 | |EntrezGene=76123 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2358 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UPG3,Q8VDU0 | |UniProt=Q3UPG3,Q8VDU0 | ||
|association_with_transcript=0bp_to_NM_029522,uc008qzo.2_5end | |association_with_transcript=0bp_to_NM_029522,uc008qzo.2_5end | ||
|cluster_id=chr3:108525199..108525229,- | |||
|description=CAGE_peak_1_at_Gpsm2_5end | |description=CAGE_peak_1_at_Gpsm2_5end | ||
|id=chr3:108525199..108525229,- | |id=chr3:108525199..108525229,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.42e-12!59;UBERON:0001007!3.77e-10!128;UBERON:0001555!3.77e-10!128;UBERON:0007026!3.77e-10!128;UBERON:0004119!1.19e-09!130;UBERON:0000925!1.19e-09!130;UBERON:0006595!1.19e-09!130;UBERON:0004921!1.59e-09!126;UBERON:0004185!1.59e-09!126;UBERON:0000344!3.82e-09!15;UBERON:0004923!3.93e-09!24;UBERON:0001242!1.71e-08!13;UBERON:0000060!1.71e-08!13;UBERON:0001262!1.71e-08!13;UBERON:0004786!1.71e-08!13;UBERON:0000160!1.13e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.05e-18,47;UBERON:0000160,1.75e-13,31;UBERON:0001007,7.53e-13,116;UBERON:0001555,7.53e-13,116;UBERON:0007026,7.53e-13,116;UBERON:0004119,3.10e-12,118;UBERON:0000925,3.10e-12,118;UBERON:0006595,3.10e-12,118;UBERON:0004921,3.82e-12,114;UBERON:0000344,3.81e-09,15;UBERON:0004923,3.93e-09,24;UBERON:0001242,1.71e-08,13;UBERON:0001262,1.71e-08,13;UBERON:0004786,1.71e-08,13 | |||
|phase1_expression=15.6945870162698,41.528073509084,39.1299345875001,51.4189159221611,37.567179745976,29.5467518564926,22.660426137766,2.06597317506522,1.267098499365,0.936258105287974,0.68487187290202,0.638177271962691,5.13602189793617,5.85716696207283,49.9664642723494,62.3623823560664,81.8487397409932,1.73504190947031,1.23402990245165,2.97072756258621,4.67738095830884,4.66667470644161,1.82839852397255,22.5589316138703,17.6645146421721,29.860062133981,23.26114779259,28.6576739472232,30.9738173713889,38.5606098532694,21.5078595335646,13.9706748161119,11.6862309641068,15.8481681015439,47.371665639209,38.8989070138872,33.6879437832909,10.8818223991596,25.7840663692854,18.3233310390829,7.64700934440319,8.87959130445979,7.76816564849846,6.6725313527056,8.51566222243922,5.13930906052708,3.12956537739216,3.05235218932625,3.95435128922049,6.02732687130279,7.13930750289349,5.75010257459886,0,4.35217285206807,5.04140698713696,5.40244815675489,6.5902691185914,2.06268836910977,6.87875966922632,4.7609188134483,5.70448263155561,3.72728985276045,5.33576877666684,2.6996991518442,0,0.7104801149461,2.09720077362883,2.68952813725088,9.95420278161385,6.21027316325777,6.73039876324422,4.28476476605705,3.3130281142742,8.69684674426174,8.62609239164127,9.19218786610021,4.40463523997555,5.61824287574826,4.6081959976873,5.14356522147756,5.94669683415663,7.29278718779464,2.23346399201105,5.06486349028512,5.19514042441154,6.77645746589436,5.26775218956681,5.96478226640962,4.99792875999015,13.1494514585807,0.869593466105033,9.46466264679525,0,9.17495425784289,7.79731700937203,8.51251085484938,11.3759980306719,19.0881961287425,15.0675882669664,16.606960001986,10.8449433228044,19.2489716121477,10.1922095882658,7.11066703153331,14.7213907887626,10.8944742154292,14.1546844604139,9.1347103775248,4.91981978929626,1.63286352971307,7.11289839741157,7.30717147949139,6.6878494204257,5.57673770044703,6.58496759959947,3.51866455723091,4.94389935468748,5.78397427679647,42.461306493594,15.8531512948461,26.2801406967868,27.1530141755724,29.8226817948995,1.46390398505774,2.51336048176146,38.3185582812887,6.11057134980193,4.19931911695385,5.20987930999565,3.89455662452539,6.8625090422794,6.15706325353036,6.25767552692195,8.95004100656157,3.53239675751252,6.97637431191358,12.220723662038,18.0390107384635,3.28539585963777,5.05060454127538,14.8337304977482,14.4838325793088,12.6043490863744,11.9056806090215,10.8858398642125,10.8896662242122,10.026084527891,7.24369438069244,15.3053274982318,20.4234566581245,14.2520410572799,17.3164628617784,20.5754964426942,24.3776516565517,25.9285491874009,6.96619933864726,7.02213187313235,5.66165395652373,3.9782889915383,5.17814431338755,4.45599513964083,5.40186184383045,4.49814997611899,6.68998387941173,6.32495162838251,6.51095045301142,5.36546802799238,6.65562451492866,5.9241545968853,7.88003827579657,3.16168357228837,3.07019973593198,3.29325172936576,3.89198614405078,9.88362758251398,6.07137213037778,54.1886804093429,45.7499480327932,7.03851226766272,9.52170354627798,10.4382643670896,16.5380490191141,16.4559752445204,15.978952593455,46.0293189698176,18.9403797932613,16.8394589896181,17.3092130675801,15.9870551437679,40.44687338944,32.4207074812041,40.0273959241278,6.2590407314517,10.5108631600951,1.1270773567308,7.73875045812194,8.92181440971078,6.45249542990931,7.58838445491087,4.72352473534727,3.61097074035162,3.45512058981041,6.22550516883013,23.6920050116854,29.4838492669804,32.8298684081886,52.3379113182338,45.1001288737019,37.6846260636501,32.2219673944908,13.2950885955529,21.4157902286704,10.0637744569148,12.6527922207291,8.11297950097858,11.36604950762,10.7638448113147,10.6137574699941,7.02062122633098,9.47457058852424,9.77789858652155,7.80827394565865,9.15291968325158,9.38035041674168,5.95109102215034,8.39074685788535,12.4531763843891,9.96591103419487,11.0023790373666,8.52089236521838,9.49767400262426,7.95569822198314,0,2.17562273527484,21.6376280128376,9.65778612066564,4.65596710964597,5.74337264301796,19.5082584998244,5.80683132570058,5.99465616890888,5.85658116444958,5.60100834105277,8.60287672629187,4.01037613348309,5.09537755419898,6.07216052512342,5.55286130031493,4.34816555741176,6.10510501201433,8.65834519770439,8.01295216502649,11.8907480328111,11.8778488540226,2.65490276679926,8.25454162926937,7.25576536715402,9.05304382828311,5.90603785761546,6.14870295887855,7.49442050187841,12.7236805317127,9.9819265947722,6.32073515871632,3.16255825724996,4.12542172992747,2.38307724027652,9.72329907769075,6.20921682157222,9.43082954139006,7.98031051390231,8.74007206250146,9.05019613311665,6.08929898229199,8.21350978222986,4.44847348814022,2.64634077665954,40.3971319706626,32.6158141925729,33.2324216354139,37.8410330489943,35.7827161444234,28.8566028263552,6.86073617438886,41.0090113914846,10.1129565301979,19.6306199011894,61.4081169835293,61.1023197912982,59.2535468604894,6.4591803397665,5.45810664062266,5.2515990045681,22.9120948323627,9.80641580101519,12.8091264289915,15.9847904416266,14.2180041289839,14.4119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| |phase1_expression=15.6945870162698,41.528073509084,39.1299345875001,51.4189159221611,37.567179745976,29.5467518564926,22.660426137766,2.06597317506522,1.267098499365,0.936258105287974,0.68487187290202,0.638177271962691,5.13602189793617,5.85716696207283,49.9664642723494,62.3623823560664,81.8487397409932,1.73504190947031,1.23402990245165,2.97072756258621,4.67738095830884,4.66667470644161,1.82839852397255,22.5589316138703,17.6645146421721,29.860062133981,23.26114779259,28.6576739472232,30.9738173713889,38.5606098532694,21.5078595335646,13.9706748161119,11.6862309641068,15.8481681015439,47.371665639209,38.8989070138872,33.6879437832909,10.8818223991596,25.7840663692854,18.3233310390829,7.64700934440319,8.87959130445979,7.76816564849846,6.6725313527056,8.51566222243922,5.13930906052708,3.12956537739216,3.05235218932625,3.95435128922049,6.02732687130279,7.13930750289349,5.75010257459886,0,4.35217285206807,5.04140698713696,5.40244815675489,6.5902691185914,2.06268836910977,6.87875966922632,4.7609188134483,5.70448263155561,3.72728985276045,5.33576877666684,2.6996991518442,0,0.7104801149461,2.09720077362883,2.68952813725088,9.95420278161385,6.21027316325777,6.73039876324422,4.28476476605705,3.3130281142742,8.69684674426174,8.62609239164127,9.19218786610021,4.40463523997555,5.61824287574826,4.6081959976873,5.14356522147756,5.94669683415663,7.29278718779464,2.23346399201105,5.06486349028512,5.19514042441154,6.77645746589436,5.26775218956681,5.96478226640962,4.99792875999015,13.1494514585807,0.869593466105033,9.46466264679525,0,9.17495425784289,7.79731700937203,8.51251085484938,11.3759980306719,19.0881961287425,15.0675882669664,16.606960001986,10.8449433228044,19.2489716121477,10.1922095882658,7.11066703153331,14.7213907887626,10.8944742154292,14.1546844604139,9.1347103775248,4.91981978929626,1.63286352971307,7.11289839741157,7.30717147949139,6.6878494204257,5.57673770044703,6.58496759959947,3.51866455723091,4.94389935468748,5.78397427679647,42.461306493594,15.8531512948461,26.2801406967868,27.1530141755724,29.8226817948995,1.46390398505774,2.51336048176146,38.3185582812887,6.11057134980193,4.19931911695385,5.20987930999565,3.89455662452539,6.8625090422794,6.15706325353036,6.25767552692195,8.95004100656157,3.53239675751252,6.97637431191358,12.220723662038,18.0390107384635,3.28539585963777,5.05060454127538,14.8337304977482,14.4838325793088,12.6043490863744,11.9056806090215,10.8858398642125,10.8896662242122,10.026084527891,7.24369438069244,15.3053274982318,20.4234566581245,14.2520410572799,17.3164628617784,20.5754964426942,24.3776516565517,25.9285491874009,6.96619933864726,7.02213187313235,5.66165395652373,3.9782889915383,5.17814431338755,4.45599513964083,5.40186184383045,4.49814997611899,6.68998387941173,6.32495162838251,6.51095045301142,5.36546802799238,6.65562451492866,5.9241545968853,7.88003827579657,3.16168357228837,3.07019973593198,3.29325172936576,3.89198614405078,9.88362758251398,6.07137213037778,54.1886804093429,45.7499480327932,7.03851226766272,9.52170354627798,10.4382643670896,16.5380490191141,16.4559752445204,15.978952593455,46.0293189698176,18.9403797932613,16.8394589896181,17.3092130675801,15.9870551437679,40.44687338944,32.4207074812041,40.0273959241278,6.2590407314517,10.5108631600951,1.1270773567308,7.73875045812194,8.92181440971078,6.45249542990931,7.58838445491087,4.72352473534727,3.61097074035162,3.45512058981041,6.22550516883013,23.6920050116854,29.4838492669804,32.8298684081886,52.3379113182338,45.1001288737019,37.6846260636501,32.2219673944908,13.2950885955529,21.4157902286704,10.0637744569148,12.6527922207291,8.11297950097858,11.36604950762,10.7638448113147,10.6137574699941,7.02062122633098,9.47457058852424,9.77789858652155,7.80827394565865,9.15291968325158,9.38035041674168,5.95109102215034,8.39074685788535,12.4531763843891,9.96591103419487,11.0023790373666,8.52089236521838,9.49767400262426,7.95569822198314,0,2.17562273527484,21.6376280128376,9.65778612066564,4.65596710964597,5.74337264301796,19.5082584998244,5.80683132570058,5.99465616890888,5.85658116444958,5.60100834105277,8.60287672629187,4.01037613348309,5.09537755419898,6.07216052512342,5.55286130031493,4.34816555741176,6.10510501201433,8.65834519770439,8.01295216502649,11.8907480328111,11.8778488540226,2.65490276679926,8.25454162926937,7.25576536715402,9.05304382828311,5.90603785761546,6.14870295887855,7.49442050187841,12.7236805317127,9.9819265947722,6.32073515871632,3.16255825724996,4.12542172992747,2.38307724027652,9.72329907769075,6.20921682157222,9.43082954139006,7.98031051390231,8.74007206250146,9.05019613311665,6.08929898229199,8.21350978222986,4.44847348814022,2.64634077665954,40.3971319706626,32.6158141925729,33.2324216354139,37.8410330489943,35.7827161444234,28.8566028263552,6.86073617438886,41.0090113914846,10.1129565301979,19.6306199011894,61.4081169835293,61.1023197912982,59.2535468604894,6.4591803397665,5.45810664062266,5.2515990045681,22.9120948323627,9.80641580101519,12.8091264289915,15.9847904416266,14.2180041289839,14.4119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| ||
|short_description=p1@Gpsm2 | |short_description=p1@Gpsm2 | ||
}} | }} |
Latest revision as of 07:41, 27 September 2015
Short description: | p1@Gpsm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpsm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2358 |
Association with transcript: | 0bp_to_NM_029522, uc008qzo.2_5end |
EntrezGene: | Gpsm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.05e-18 | 47 |
intestine | 1.75e-13 | 31 |
digestive system | 7.53e-13 | 116 |
digestive tract | 7.53e-13 | 116 |
primitive gut | 7.53e-13 | 116 |
endoderm-derived structure | 3.10e-12 | 118 |
endoderm | 3.10e-12 | 118 |
presumptive endoderm | 3.10e-12 | 118 |
subdivision of digestive tract | 3.82e-12 | 114 |
mucosa | 3.81e-09 | 15 |
organ component layer | 3.93e-09 | 24 |
intestinal mucosa | 1.71e-08 | 13 |
wall of intestine | 1.71e-08 | 13 |
gastrointestinal system mucosa | 1.71e-08 | 13 |