FFCP PHASE1:Mm9::chr13:49600312..49600327,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=407800 | |EntrezGene=407800 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2855 | |||
|TSSclassifier=NA | |||
|UniProt=Q5FW85 | |UniProt=Q5FW85 | ||
|association_with_transcript=133bp_to_ENSMUST00000051504,NM_001012324,uc007qjl.1,uc011yzf.1_5end | |association_with_transcript=133bp_to_ENSMUST00000051504,NM_001012324,uc007qjl.1,uc011yzf.1_5end | ||
|cluster_id=chr13:49600312..49600327,+ | |||
|description=CAGE_peak_4_at_Ecm2_5end | |description=CAGE_peak_4_at_Ecm2_5end | ||
|id=chr13:49600312..49600327,+ | |id=chr13:49600312..49600327,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.19e-08,23;UBERON:0001009,2.19e-08,23;UBERON:0007100,3.68e-08,18;UBERON:0000948,3.68e-08,18;UBERON:0005498,3.68e-08,18;UBERON:0004140,3.68e-08,18;UBERON:0009881,3.68e-08,18;UBERON:0004141,3.68e-08,18;UBERON:0003084,3.68e-08,18;UBERON:0007005,3.68e-08,18;UBERON:0004139,3.68e-08,18;UBERON:0004291,3.68e-08,18 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0,0,0.218025156380447,0.219686182734472,0.777719596297134,0.139986421625363,0,0,0,0,0.514518872071894,2.86533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0,0,0.279182999001381,0.56276261003168,1.06958773443767,0.294628585473668,0.142371680799103,0.186399445825301,0,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.842666520790511,1.36344258062446,1.29893002301434,1.41335829804136,0.14084341977668,6.41632387071589,7.64415719119937,7.11066703153331,0,0,0,0.45673551887624,3.88406825470758,1.7813056687779,0,0,0.461230994512117,0.301445281105245,0.587943535678524,0.879666139307728,0.247194967734374,10.2665543413137,0,1.29413479957927,1.54589062922275,0.969750506270444,0,0.878342391034642,0.628340120440365,0.510914110417183,0,0,0,1.19832511523858,0,0.251308704225729,0.173824320192276,0.767146371990992,0.20778804455956,0,1.01839363850316,1.99051152976149,0.758168275301024,1.26265113531884,0.130120442962704,0,0.540186389416048,0,0.0680364991513279,0.640568601424249,0.468508622798644,0.517406741478031,0,0,0.175951124163949,0,0.556094498451196,2.78601733217733,1.85203922767149,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0.787056926989615,0.308534225774757,1.62773761325285,2.95100741539581,1.16765342367169,1.6455984991348,4.10418660197738,4.29664690593035,4.5321996101853,4.61055242111206,3.75777972529041,0.841159794256509,0.411618449517138,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0.494096864172033,0.502670417600539,0.596869416123452,0.58489226135736,0,0.648414149624083,0.796565093017469,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.632365371242573,1.32849133181642,0.627994911365499,0.493588655687202,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0,0,1.01031551178845,0.538192240565737,0.482443521363367,3.32555742299888,0,0,0.169745085775188,0.469380496577004,0.670025029767263,1.19021820443007,0.585400943573396,1.26108115284953,1.10732344824387,1.91345722388985,2.62181303545181,3.7990696010497,1.88043776155965,0,0,1.47529281905711,1.10374698521893,1.9266070798535,0.234423373184406,0,4.29200576247434,0,0,0,0,0,0,0,0,0,0,2.2710413633323,0,0,2.47455184458803,1.32745138339963,0,0,0,0,0,0,1.45413491791002,0.356497378384721,3.16036757935816,2.10837217149998,1.03135543248187,0.680879211507576,0,0,0,0.532020700926821,0.891844088010353,0.164549020602121,0.304464949114599,0,0.21183207086382,0.661585194164886,5.7710188529518,0.484393280087717,0.965006798850494,1.19372344003136,0.656563598980245,0.582961673259701,1.11255181206306,0,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0,0,0,0,0.436725127492355,0.944050424693745,0.578574190077352,0.523511883968059,0.648074866458964,0.621339313086926,0.56369293868419,0.149516546043979,0,0.194451188344048,0.387479470433193,0.337912250981556,0.938857909166032,0.5208175393758,1.67774951081137,0.241584120826006,0.864090018773596,0.632022241256357,0,0.102710957164827,0.25984164595559,0.537080087002444,0,0,0.147689527174577,0.605798699688886,0.0762068066549998,0.100826185136841,0.292373642219257,0.384847366561318,0.233753804363138,3.85441652145859,0,0,0,1.54551675225752,1.31377732815827,1.64836461840539,1.92931541171159,0.501572104035363,0,0,0,0,0.685082519770642,0,0.675022500231806,1.35096360967266,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0,0,0.183843508450014,0.888986911206461,0.206035057238894,0,0.505394423527595,0.760437899670719,0.754505365544305,0.37456602987953,0.192075457214608,0.746661096422973,0,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,1.43061713968393,0.145346416632329,0.470546902076653,0.169229215783353,0.548783918618318,0,0.271608227691724,0,0.118635018124174,0.788035859004508,0,0,0.578719832943424,0.499621155875892,0.467863216890817,0.429742108096597,3.25190164517034,1.76473135295612,2.55054619182464 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0,0,0.218025156380447,0.219686182734472,0.777719596297134,0.139986421625363,0,0,0,0,0.514518872071894,2.86533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0,0,0.279182999001381,0.56276261003168,1.06958773443767,0.294628585473668,0.142371680799103,0.186399445825301,0,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.842666520790511,1.36344258062446,1.29893002301434,1.41335829804136,0.14084341977668,6.41632387071589,7.64415719119937,7.11066703153331,0,0,0,0.45673551887624,3.88406825470758,1.7813056687779,0,0,0.461230994512117,0.301445281105245,0.587943535678524,0.879666139307728,0.247194967734374,10.2665543413137,0,1.29413479957927,1.54589062922275,0.969750506270444,0,0.878342391034642,0.628340120440365,0.510914110417183,0,0,0,1.19832511523858,0,0.251308704225729,0.173824320192276,0.767146371990992,0.20778804455956,0,1.01839363850316,1.99051152976149,0.758168275301024,1.26265113531884,0.130120442962704,0,0.540186389416048,0,0.0680364991513279,0.640568601424249,0.468508622798644,0.517406741478031,0,0,0.175951124163949,0,0.556094498451196,2.78601733217733,1.85203922767149,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0.787056926989615,0.308534225774757,1.62773761325285,2.95100741539581,1.16765342367169,1.6455984991348,4.10418660197738,4.29664690593035,4.5321996101853,4.61055242111206,3.75777972529041,0.841159794256509,0.411618449517138,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0.494096864172033,0.502670417600539,0.596869416123452,0.58489226135736,0,0.648414149624083,0.796565093017469,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.632365371242573,1.32849133181642,0.627994911365499,0.493588655687202,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0,0,1.01031551178845,0.538192240565737,0.482443521363367,3.32555742299888,0,0,0.169745085775188,0.469380496577004,0.670025029767263,1.19021820443007,0.585400943573396,1.26108115284953,1.10732344824387,1.91345722388985,2.62181303545181,3.7990696010497,1.88043776155965,0,0,1.47529281905711,1.10374698521893,1.9266070798535,0.234423373184406,0,4.29200576247434,0,0,0,0,0,0,0,0,0,0,2.2710413633323,0,0,2.47455184458803,1.32745138339963,0,0,0,0,0,0,1.45413491791002,0.356497378384721,3.16036757935816,2.10837217149998,1.03135543248187,0.680879211507576,0,0,0,0.532020700926821,0.891844088010353,0.164549020602121,0.304464949114599,0,0.21183207086382,0.661585194164886,5.7710188529518,0.484393280087717,0.965006798850494,1.19372344003136,0.656563598980245,0.582961673259701,1.11255181206306,0,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0,0,0,0,0.436725127492355,0.944050424693745,0.578574190077352,0.523511883968059,0.648074866458964,0.621339313086926,0.56369293868419,0.149516546043979,0,0.194451188344048,0.387479470433193,0.337912250981556,0.938857909166032,0.5208175393758,1.67774951081137,0.241584120826006,0.864090018773596,0.632022241256357,0,0.102710957164827,0.25984164595559,0.537080087002444,0,0,0.147689527174577,0.605798699688886,0.0762068066549998,0.100826185136841,0.292373642219257,0.384847366561318,0.233753804363138,3.85441652145859,0,0,0,1.54551675225752,1.31377732815827,1.64836461840539,1.92931541171159,0.501572104035363,0,0,0,0,0.685082519770642,0,0.675022500231806,1.35096360967266,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0,0,0.183843508450014,0.888986911206461,0.206035057238894,0,0.505394423527595,0.760437899670719,0.754505365544305,0.37456602987953,0.192075457214608,0.746661096422973,0,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,1.43061713968393,0.145346416632329,0.470546902076653,0.169229215783353,0.548783918618318,0,0.271608227691724,0,0.118635018124174,0.788035859004508,0,0,0.578719832943424,0.499621155875892,0.467863216890817,0.429742108096597,3.25190164517034,1.76473135295612,2.55054619182464 | ||
|short_description=p4@Ecm2 | |short_description=p4@Ecm2 | ||
}} | }} |
Latest revision as of 17:01, 1 October 2015
Short description: | p4@Ecm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ecm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2855 |
Association with transcript: | 133bp_to_ENSMUST00000051504, NM_001012324, uc007qjl.1, uc011yzf.1_5end |
EntrezGene: | Ecm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 2.19e-08 | 23 |
circulatory system | 2.19e-08 | 23 |
primary circulatory organ | 3.68e-08 | 18 |
heart | 3.68e-08 | 18 |
primitive heart tube | 3.68e-08 | 18 |
primary heart field | 3.68e-08 | 18 |
anterior lateral plate mesoderm | 3.68e-08 | 18 |
heart tube | 3.68e-08 | 18 |
heart primordium | 3.68e-08 | 18 |
cardiac mesoderm | 3.68e-08 | 18 |
cardiogenic plate | 3.68e-08 | 18 |
heart rudiment | 3.68e-08 | 18 |