CL:0002584: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002584
|name=renal cortical epithelial cell
|namespace=cell
|def="An epithelial cell of the kidney cortex." [GOC:tfm]
|xref=KUPO:0001016
|is_a=CL:0002518
|...") |
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|def="An epithelial cell of the kidney cortex." [GOC:tfm] | |def="An epithelial cell of the kidney cortex." [GOC:tfm] | ||
|xref=KUPO:0001016 | |xref=KUPO:0001016 | ||
|is_a=CL:0002518 | |is_a=CL:0002518;;CL:0002681 | ||
|synonym= | |synonym= | ||
|comment= | |comment= | ||
|alt_id= | |alt_id= | ||
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|located_in= | |located_in= | ||
|part_of=UBERON:0001225 | |part_of=UBERON:0001225 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:41, 15 June 2012
| Name: | renal cortical epithelial cell | ||
|---|---|---|---|
| Namespace: | cell | ||
| Definition: | "An epithelial cell of the kidney cortex." [GOC:tfm] | ||
| Xrefs: |
|
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002518(kidney epithelial cell),CL:0002681(kidney cortical cell) |
|---|---|
| part_of: | UBERON:0001225(cortex of kidney) |
Children
| is a: | CL:1000612 (kidney corpuscule cell),CL:1000615 (kidney cortex tubule cell) |
|---|---|
| derives from: | FF:0000152 (human renal cortical epithelial cell sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11596-120H3 (Renal Cortical Epithelial Cells, donor2)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11675-122H1 (Renal Glomerular Endothelial Cells, donor3)
... further results Mouse (Mus musculus)
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11596-120H3 (Renal Cortical Epithelial Cells, donor2)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11675-122H1 (Renal Glomerular Endothelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002584 (renal cortical epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.8e-58 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_48391457440185be8591682be6813397 | p@chr2:693380..693398, + |
| 4.8e-58 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_48391457440185be8591682be6813397 | p@chr2:693380..693398, + |
| 4.05e-52 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_130dfebdd1ad5083503b58c4d9d0589d | p7@HOXA10 |
| 4.05e-52 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_130dfebdd1ad5083503b58c4d9d0589d | p7@HOXA10 |
| 1.06e-50 | FFCP PHASE2:Hg19::chr5:74244100..74244117,+#_f4a9ae2b9f391fbed538561481135d75 | p@chr5:74244100..74244117, + |
| 1.06e-50 | FFCP PHASE1:Hg19::chr5:74244100..74244117,+#_f4a9ae2b9f391fbed538561481135d75 | p@chr5:74244100..74244117, + |
| 5.59e-50 | FFCP PHASE2:Hg19::chr1:20465872..20465881,+#_8c0370856c4b36ec09831290d18c143a | p2@PLA2G2F |
| 5.59e-50 | FFCP PHASE1:Hg19::chr1:20465872..20465881,+#_8c0370856c4b36ec09831290d18c143a | p2@PLA2G2F |
| 6.11e-42 | FFCP PHASE2:Hg19::chr16:86768403..86768437,+#_b9ac9002e2bc4f0f94b466c338ad3366 | p@chr16:86768403..86768437, + |
| 6.11e-42 | FFCP PHASE1:Hg19::chr16:86768403..86768437,+#_b9ac9002e2bc4f0f94b466c338ad3366 | p@chr16:86768403..86768437, + |
| 3.58e-41 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_6b8568bda6988f56446c09a03b63f120 | p4@MEGF11 |
| 3.58e-41 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_6b8568bda6988f56446c09a03b63f120 | p4@MEGF11 |
| 1.0e-40 | FFCP PHASE1:Hg19::chr1:94713418..94713436,+#_75ccd819eb972aa034092601ef6fd832 | p1@ENST00000413103 |
| 1.0e-40 | FFCP PHASE2:Hg19::chr1:94713418..94713436,+#_75ccd819eb972aa034092601ef6fd832 | p1@ENST00000413103 |
| 6.83e-40 | FFCP PHASE1:Hg19::chr7:140227303..140227330,-#_d599e975d00bc8e32acbf27579c68fb6 | p@chr7:140227303..140227330, - |
| 6.83e-40 | FFCP PHASE2:Hg19::chr7:140227303..140227330,-#_d599e975d00bc8e32acbf27579c68fb6 | p@chr7:140227303..140227330, - |
| 9.22e-40 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e166f956b6567073de90be7e7edb3330 | p3@PAX2 |
| 9.22e-40 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e166f956b6567073de90be7e7edb3330 | p3@PAX2 |
| 1.79e-39 | FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_1f5fa89a8f31d23ff8a92bd2bde6159c | p@chr18:3456189..3456200, + |
| 1.79e-39 | FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_1f5fa89a8f31d23ff8a92bd2bde6159c | p@chr18:3456189..3456200, + |
| 4.5e-38 | FFCP PHASE1:Hg19::chr6:30890456..30890482,+#_dbfa2c3626e7f77dc9c86599d9c482ce | p11@VARS2 |
| 4.5e-38 | FFCP PHASE2:Hg19::chr6:30890456..30890482,+#_dbfa2c3626e7f77dc9c86599d9c482ce | p11@VARS2 |
| 8.61e-38 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_e6a402695dcdb233535ca88a5aaa7180 | p@chr2:120409486..120409492, + |
| 8.61e-38 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_e6a402695dcdb233535ca88a5aaa7180 | p@chr2:120409486..120409492, + |
| 5.07e-37 | FFCP PHASE1:Hg19::chr20:6033532..6033548,-#_b8c8ec6300245ff20b223fff77d62c21 | p2@AB527789 |
| 5.07e-37 | FFCP PHASE2:Hg19::chr20:6033532..6033548,-#_b8c8ec6300245ff20b223fff77d62c21 | p2@AB527789 |
| 6.37e-37 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_65fe871adc78fc42b97cf78a160c0441 | p@chr1:1100457..1100470, + |
| 6.37e-37 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_65fe871adc78fc42b97cf78a160c0441 | p@chr1:1100457..1100470, + |
| 1.63e-36 | FFCP PHASE1:Hg19::chr20:6034607..6034616,-#_42d383e426435976d5a1462340127c20 | p6@LRRN4 |
| 1.63e-36 | FFCP PHASE2:Hg19::chr20:6034607..6034616,-#_42d383e426435976d5a1462340127c20 | p6@LRRN4 |
| 2.81e-35 | FFCP PHASE2:Hg19::chr17:36104873..36104903,-#_d78570ea5abc2a80931ad63c13533c08 | p3@HNF1B |
| 2.81e-35 | FFCP PHASE1:Hg19::chr17:36104873..36104903,-#_d78570ea5abc2a80931ad63c13533c08 | p3@HNF1B |
| 4.37e-35 | FFCP PHASE1:Hg19::chr9:133986782..133986794,+#_8fe086e110db708cbf5fea081decd4b1 | p4@AIF1L |
| 4.37e-35 | FFCP PHASE2:Hg19::chr9:133986782..133986794,+#_8fe086e110db708cbf5fea081decd4b1 | p4@AIF1L |
| 1.19e-34 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_690f2bb0ee2880dd6e2292666812574f | p4@PAX2 |
| 1.19e-34 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_690f2bb0ee2880dd6e2292666812574f | p4@PAX2 |
| 5.98e-34 | FFCP PHASE1:Hg19::chr5:167718782..167718785,+#_e9ca4d668c89e5de0ad78a5132ad120f | p10@WWC1 |
| 5.98e-34 | FFCP PHASE2:Hg19::chr5:167718782..167718785,+#_e9ca4d668c89e5de0ad78a5132ad120f | p10@WWC1 |
| 2.93e-33 | FFCP PHASE1:Hg19::chr20:6034672..6034714,-#_245267bd3cc1c7d44236caf2c5263ca5 | p2@LRRN4 |
| 2.93e-33 | FFCP PHASE2:Hg19::chr20:6034672..6034714,-#_245267bd3cc1c7d44236caf2c5263ca5 | p2@LRRN4 |
| 1.44e-32 | FFCP PHASE1:Hg19::chr16:3068288..3068312,-#_00b5e163d624797b7be325904fda6e90 | p2@CLDN6 |
| 1.44e-32 | FFCP PHASE2:Hg19::chr16:3068288..3068312,-#_00b5e163d624797b7be325904fda6e90 | p2@CLDN6 |
| 1.85e-32 | FFCP PHASE2:Hg19::chr20:6034828..6034857,-#_86cb2aef8bd2bdf55579a7e9776cab47 | p5@LRRN4 |
| 1.85e-32 | FFCP PHASE1:Hg19::chr20:6034828..6034857,-#_86cb2aef8bd2bdf55579a7e9776cab47 | p5@LRRN4 |
| 4.69e-32 | FFCP PHASE2:Hg19::chr7:140227349..140227360,-#_3a3ad25991e13d529ada8a7d22209277 | p@chr7:140227349..140227360, - |
| 4.69e-32 | FFCP PHASE1:Hg19::chr7:140227349..140227360,-#_3a3ad25991e13d529ada8a7d22209277 | p@chr7:140227349..140227360, - |
| 1.23e-31 | FFCP PHASE2:Hg19::chr17:27970385..27970397,-#_b7db36517be2276146ca7ad74f4da440 | p@chr17:27970385..27970397, - |
| 1.23e-31 | FFCP PHASE1:Hg19::chr17:27970385..27970397,-#_b7db36517be2276146ca7ad74f4da440 | p@chr17:27970385..27970397, - |
| 2.99e-30 | FFCP PHASE1:Hg19::chr15:85403302..85403304,+#_356fa3b394fbdafef8a5f48536ecd0db | p@chr15:85403302..85403304, + |
| 2.99e-30 | FFCP PHASE2:Hg19::chr15:85403302..85403304,+#_356fa3b394fbdafef8a5f48536ecd0db | p@chr15:85403302..85403304, + |
| 3.02e-30 | FFCP PHASE1:Hg19::chr21:41029235..41029269,+#_525f03d576f5daaab803b1c8fb249cb1 | p2@B3GALT5 |
| 3.02e-30 | FFCP PHASE2:Hg19::chr21:41029235..41029269,+#_525f03d576f5daaab803b1c8fb249cb1 | p2@B3GALT5 |
| 1.06e-29 | FFCP PHASE1:Hg19::chr19:50390837..50390847,+#_3dba0353a720ee2f7d96e25381a9a005 | p@chr19:50390837..50390847, + |
| 1.06e-29 | FFCP PHASE2:Hg19::chr19:50390837..50390847,+#_3dba0353a720ee2f7d96e25381a9a005 | p@chr19:50390837..50390847, + |
| 1.26e-29 | FFCP PHASE1:Hg19::chr20:6034576..6034592,-#_dc4540f13fa046fd1e2f429ab668d990 | p3@LRRN4 |
| 1.26e-29 | FFCP PHASE2:Hg19::chr20:6034576..6034592,-#_dc4540f13fa046fd1e2f429ab668d990 | p3@LRRN4 |
| 1.54e-29 | FFCP PHASE1:Hg19::chr17:171147..171161,+#_924df319e44f017315698121d339fa81 | p@chr17:171147..171161, + |
| 1.54e-29 | FFCP PHASE2:Hg19::chr17:171147..171161,+#_924df319e44f017315698121d339fa81 | p@chr17:171147..171161, + |
| 3.11e-29 | FFCP PHASE1:Hg19::chr21:46826248..46826282,-#_fa92e54006dfd8c9dd9f8c6cac3c27d4 | p@chr21:46826248..46826282, - |
| 3.11e-29 | FFCP PHASE2:Hg19::chr21:46826248..46826282,-#_fa92e54006dfd8c9dd9f8c6cac3c27d4 | p@chr21:46826248..46826282, - |
| 4.34e-29 | FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_e267730f28b22692c79e56d984ede771 | p1@ENST00000418041, p1@ENST00000443104 |
| 4.34e-29 | FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_e267730f28b22692c79e56d984ede771 | p1@ENST00000418041, p1@ENST00000443104 |
| 1.58e-28 | FFCP PHASE1:Hg19::chr9:133986807..133986821,+#_bcddc380e74ca6ab9131998818ac7b3f | p3@AIF1L |
| 1.58e-28 | FFCP PHASE2:Hg19::chr9:133986807..133986821,+#_bcddc380e74ca6ab9131998818ac7b3f | p3@AIF1L |
| 2.94e-28 | FFCP PHASE1:Hg19::chr7:7606139..7606151,-#_e77cd557899cbcc33830cbbcaab105af | p@chr7:7606139..7606151, - |
| 2.94e-28 | FFCP PHASE2:Hg19::chr7:7606139..7606151,-#_e77cd557899cbcc33830cbbcaab105af | p@chr7:7606139..7606151, - |
| 6.08e-28 | FFCP PHASE2:Hg19::chr10:91043420..91043437,+#_926868fed62ae478edc49a20b2d2448b | p1@ENST00000444849 |
| 6.08e-28 | FFCP PHASE1:Hg19::chr10:91043420..91043437,+#_926868fed62ae478edc49a20b2d2448b | p1@ENST00000444849 |
| 1.11e-27 | FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_30aafb957b71e462fa1f0c8d5fc734ad | p2@PAX2 |
| 1.11e-27 | FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_30aafb957b71e462fa1f0c8d5fc734ad | p2@PAX2 |
| 2.09e-27 | FFCP PHASE1:Hg19::chr9:71735910..71735923,+#_d4475b5c4e487f8a5e035ed16dbed908 | p16@TJP2 |
| 2.09e-27 | FFCP PHASE2:Hg19::chr9:71735910..71735923,+#_d4475b5c4e487f8a5e035ed16dbed908 | p16@TJP2 |
| 2.35e-27 | FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_f6f7bb3aa35b530a035327f4deade547 | p@chr16:86604624..86604648, + |
| 2.35e-27 | FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_f6f7bb3aa35b530a035327f4deade547 | p@chr16:86604624..86604648, + |
| 3.45e-27 | FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_fa4b64139c52ac3c4f95f908624dcd3a | p7@LRRN4 |
| 3.45e-27 | FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_fa4b64139c52ac3c4f95f908624dcd3a | p7@LRRN4 |
| 7.25e-27 | FFCP PHASE1:Hg19::chr17:171082..171101,+#_17cf0dd3206541d9534063cf67fc9381 | p@chr17:171082..171101, + |
| 7.25e-27 | FFCP PHASE2:Hg19::chr17:171082..171101,+#_17cf0dd3206541d9534063cf67fc9381 | p@chr17:171082..171101, + |
| 4.96e-26 | FFCP PHASE1:Hg19::chr20:6033140..6033181,-#_4d0a791f3189e4bed57bb7d4bdeeab76 | p1@AB527789 |
| 4.96e-26 | FFCP PHASE2:Hg19::chr20:6033140..6033181,-#_4d0a791f3189e4bed57bb7d4bdeeab76 | p1@AB527789 |
| 7.1e-26 | FFCP PHASE2:Hg19::chr2:108994633..108994650,+#_365a0ae20ade498b0f2371e4e78fa27d | p4@SULT1C4 |
| 7.1e-26 | FFCP PHASE1:Hg19::chr2:108994633..108994650,+#_365a0ae20ade498b0f2371e4e78fa27d | p4@SULT1C4 |
| 9.68e-25 | FFCP PHASE2:Hg19::chr6:24358114..24358125,-#_8aaf1b05179a9b29d595de8b641e9d62 | p4@DCDC2 |
| 9.68e-25 | FFCP PHASE1:Hg19::chr6:24358114..24358125,-#_8aaf1b05179a9b29d595de8b641e9d62 | p4@DCDC2 |
| 1.6e-24 | FFCP PHASE1:Hg19::chr2:177053683..177053697,-#_db758bd0fcea6abbff1ccf17646112a7 | p1@LOC401022 |
| 1.6e-24 | FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_db758bd0fcea6abbff1ccf17646112a7 | p16@HOXA10 |
| 1.6e-24 | FFCP PHASE2:Hg19::chr2:177053683..177053697,-#_db758bd0fcea6abbff1ccf17646112a7 | p1@LOC401022 |
| 1.6e-24 | FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_db758bd0fcea6abbff1ccf17646112a7 | p16@HOXA10 |
| 1.66e-24 | FFCP PHASE1:Hg19::chr22:37823036..37823049,-#_4119f23676a202924aea91571542d1f4 | p1@ENST00000451509 |
| 1.66e-24 | FFCP PHASE2:Hg19::chr22:37823036..37823049,-#_4119f23676a202924aea91571542d1f4 | p1@ENST00000451509 |
| 1.87e-24 | FFCP PHASE2:Hg19::chr17:46675539..46675551,-#_60b3dff8976435c468f8e609635bac0b | p7@HOXB6 |
| 1.87e-24 | FFCP PHASE1:Hg19::chr17:46675539..46675551,-#_60b3dff8976435c468f8e609635bac0b | p7@HOXB6 |
| 2.63e-24 | FFCP PHASE2:Hg19::chr13:26619917..26619921,-#_06350f8d436e7ae3451f7bcb8192c209 | p@chr13:26619917..26619921, - |
| 2.63e-24 | FFCP PHASE1:Hg19::chr13:26619917..26619921,-#_06350f8d436e7ae3451f7bcb8192c209 | p@chr13:26619917..26619921, - |
| 2.91e-24 | FFCP PHASE2:Hg19::chr2:177016336..177016350,+#_b4884e2e32408b59249e57b138d8aabc | p1@HOXD4 |
| 2.91e-24 | FFCP PHASE1:Hg19::chr2:177016336..177016350,+#_b4884e2e32408b59249e57b138d8aabc | p1@HOXD4 |
| 2.98e-24 | FFCP PHASE1:Hg19::chr7:98453821..98453843,-#_b36aad57702fb67e6d5b6f35eaaf8459 | p@chr7:98453821..98453843, - |
| 2.98e-24 | FFCP PHASE2:Hg19::chr7:98453821..98453843,-#_b36aad57702fb67e6d5b6f35eaaf8459 | p@chr7:98453821..98453843, - |
| 3.49e-24 | FFCP PHASE2:Hg19::chr12:6485243..6485254,-#_1a12aab1ccb5572855d0f85befad75ad | p18@SCNN1A |
| 3.49e-24 | FFCP PHASE1:Hg19::chr12:6485243..6485254,-#_1a12aab1ccb5572855d0f85befad75ad | p18@SCNN1A |
