Personal tools

FFCP PHASE1:Mm9::chr9:83040135..83040195,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Hmgn3_5end
|description=CAGE_peak_1_at_Hmgn3_5end
|id=chr9:83040135..83040195,-
|id=chr9:83040135..83040195,-
|ontology_enrichment_celltype=CL:0000221!2.04e-11!44;CL:0000133!2.04e-11!44;CL:0002319!5.36e-11!43;CL:0000393!8.84e-11!39;CL:0000211!8.84e-11!39;CL:0000055!9.90e-11!50;CL:0000540!1.71e-10!33;CL:0000047!1.71e-10!33;CL:0000031!1.71e-10!33;CL:0000404!1.71e-10!33;CL:0000107!3.58e-07!9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=49.8062914495909,0.348975407639361,0.454999239389536,0,0,6.5472916045637,8.64366770203445,3.09895976259783,0,0,0.513653904676515,0.398860794976682,0,0.0874204024189974,3.33109761815663,3.64455481301687,0.699561878128147,9.93705820878449,12.3402990245165,7.63901373236454,16.1582251287033,0.893618560807968,1.04479915655574,5.75972722056264,6.8822784320151,0,1.29228598847722,2.58565479223067,0.380046838912748,0.756090389279792,2.43903561720835,0,0,0,0.577703239502549,1.16364251750945,0.408338712524738,0,0.7813353445238,0.523523743973798,0.588231488031014,0,0,18.1291417884831,22.4043017995127,12.8482726513177,15.6478268869608,52.7620878440681,58.656210790104,70.3836234648906,46.335505557995,17.2503077237966,10.5703041816374,2.17608642603403,0.336093799142464,76.6633119387122,48.4241513496499,59.8179627041833,24.6826082248709,26.4495489636016,24.0855933332348,13.2149367506962,25.789549087223,4.04954872776629,5.93319817540185,12.7886420690298,19.4740071836963,30.3532461204028,50.7042204188456,37.8016627328734,45.8508415746013,49.417620301858,63.3892712531131,32.7050433903927,32.9708420302733,25.7381260250806,46.2486700197433,48.5211884723713,52.2262213071228,24.3989632300859,28.2696818731446,33.3384557156326,47.4611098302348,55.1507357831046,52.7153954829995,61.5773743639965,80.8671146938905,31.1287074528252,24.3838342532853,33.1759148868788,10.1452571045587,3.44169550792555,0,0,1.29955283489534,0,9.97155382935438,33.0634825801432,37.9287566720188,31.0938825569099,53.5204995151386,28.2318250311499,30.5766287647975,42.6640021891999,33.339620315727,33.6968621081881,34.88118670602,6.73684890342454,22.5275958773039,50.7672115601701,31.921300124969,57.8484408793068,50.7354093963329,73.7033712302324,44.8012974187035,41.7213083214523,3.21353458054686,13.3031408366319,7.07688441559899,27.5003644910596,11.4837589599405,18.4252596191384,9.31958806090611,35.7192572354088,42.9365748967583,3.32094171771169,9.82484020948546,13.197860081855,12.1987417990142,36.5489160147767,37.972550033946,32.1675141408933,57.3620256634512,52.1659532953874,35.5317556196848,49.6458264987338,33.5051507067541,20.1539292388351,11.1198013710817,29.4618598241064,48.9252865539766,58.8549387349691,63.2018075616776,85.9017461663576,85.9981349272784,111.458936647819,93.6080228351691,154.96331907267,16.5987354558289,33.8499883500397,48.9144125175778,38.3592531748256,68.9557178079483,52.237824978325,78.1972118350185,16.9179126795719,11.2354109970118,6.94839349209731,8.24074148247219,28.7904823824348,39.6349041368053,37.4529087838911,34.3279866598555,45.4525375336503,41.9606547053669,42.5537118893246,42.3871974211398,35.2631333948852,30.2790123840804,28.4009712856835,15.5652114328043,13.4503988431306,14.0512073786272,11.6759584321523,47.7358183240569,39.4124665412659,0.660837565967596,3.43785736662608,23.8882840599462,28.3328739669735,19.0723842756698,13.5127961497639,13.3426826306922,11.223311940641,4.74529061544512,10.8701310117847,9.80207314321051,12.5342577385925,10.3330966173134,7.19055526923377,6.48414149624083,3.98282546508734,15.9321036800589,36.9022695729424,32.6852433451933,39.508357601991,34.1356377415021,28.4751428754693,30.0373551340222,19.4845395333075,24.0208053597303,19.8669433914099,0.889357881261447,2.8363667971736,4.32429789249047,2.9232074610031,1.42002084971952,0.964708639009667,2.29163266603278,2.01387296215567,2.7562988551756,2.47105271869273,7.18841032636773,2.97712758134803,3.74445207737473,3.03094653536534,2.15276896226295,1.4473305640901,14.2259956428286,26.3393062360974,24.4447464663039,29.7053900106579,26.5199980566007,17.5881570313907,8.80761471278251,11.5128852236101,12.9260818167077,11.9590932410338,12.5969267239415,16.0586048421423,16.0597033135283,14.6095549167327,13.5712155545345,49.4954172275026,14.2611639175521,13.2449638226272,29.8624097377293,36.921681276544,29.6722251131783,13.1284882146274,103.802204187948,117.522062033288,112.235590218788,74.0803273652911,73.5235624471901,62.2768367735431,97.1545684019746,93.2296186737085,83.801008924663,57.1951943230817,16.1811697137426,21.7240036474051,28.6681048462294,21.4461159864296,10.619611067197,23.0641604347232,17.5347663039556,17.3516673375426,10.6308681437078,25.517117279346,18.3484088149437,26.1744285223804,19.9638531895444,12.009396801561,7.37930260024991,4.12542172992747,74.5562736600796,51.4974728929547,29.6231385862508,64.0867734744461,82.2858684100149,56.0078087270502,55.2884709223126,30.1420299623453,7.50949465803873,2.75381692122966,55.5731563098504,17.9726015706213,56.6740137702628,43.2443671734878,27.097522088712,16.7423717739962,7.86998258900597,26.5158181875029,8.37267315909478,23.5281029478074,25.5568447770202,12.0555812483002,9.70529016819279,10.7525741407066,17.3377998593732,18.6135431590465,14.2345973018557,41.0508365746499,21.8271835570983,30.904559003281,34.4537037221546,36.3813635065176,52.6253778628288,41.40335434014,30.251164795473,28.0078857922912,8.16574331738295,17.3975007664339,9.01908701894705,9.41954240077066,11.0857188606255,28.9732270632631,32.4191156929105,40.0426017413144,34.7377426391432,24.0878111961308,16.3580577304109,14.0118790079084,7.77681016896237,12.324433704499,7.09538253515575,9.96296284498824,5.71651621102298,7.16106782669926,4.56967115996909,4.68762253127878,4.13530676088816,6.86571859647404,5.56309688581499,6.15039729334727,8.38137774361871,9.52497232239262,12.5058285334279,40.3580082835076,17.314904363177,4.75483440030221,5.54019234001459,42.5017106870819,30.5922434985427,11.721703953105,35.3707825480459,28.0880378259804,72.2882358549845,74.5726883141627,67.0287750724094,61.8671456437275,61.6574267793578,60.431511791176,70.2023400241078,59.8927200288213,57.549085940994,57.9891549162038,40.2694908626605,39.104437593301,29.1954465839569,32.0900866530148,31.0227480689414,35.8494841477528,30.4478017088213,27.8147327272507,34.659274635916,28.3020877175453,31.4314331863897,26.4076877940507,32.8681691219287,33.1650289457223,30.9002822981199,25.2435656380029,33.8382231758978,36.0740242267128,35.0273015682811,35.180541912121,34.2869252385415,34.7852580072301,41.0110246709392,29.7960154096273,32.3736268628737,31.138175704137,29.2684756596436,40.7758052728656,34.9016572583865,29.1793981262024,35.5905054372522,31.1274164306781,36.830793885272,30.0577471900774,29.1288982581524,21.9833308585392,33.6861516161388,33.9496265396311,27.3542314858446,28.4562930664175,21.3318408770788
|phase1_expression=49.8062914495909,0.348975407639361,0.454999239389536,0,0,6.5472916045637,8.64366770203445,3.09895976259783,0,0,0.513653904676515,0.398860794976682,0,0.0874204024189974,3.33109761815663,3.64455481301687,0.699561878128147,9.93705820878449,12.3402990245165,7.63901373236454,16.1582251287033,0.893618560807968,1.04479915655574,5.75972722056264,6.8822784320151,0,1.29228598847722,2.58565479223067,0.380046838912748,0.756090389279792,2.43903561720835,0,0,0,0.577703239502549,1.16364251750945,0.408338712524738,0,0.7813353445238,0.523523743973798,0.588231488031014,0,0,18.1291417884831,22.4043017995127,12.8482726513177,15.6478268869608,52.7620878440681,58.656210790104,70.3836234648906,46.335505557995,17.2503077237966,10.5703041816374,2.17608642603403,0.336093799142464,76.6633119387122,48.4241513496499,59.8179627041833,24.6826082248709,26.4495489636016,24.0855933332348,13.2149367506962,25.789549087223,4.04954872776629,5.93319817540185,12.7886420690298,19.4740071836963,30.3532461204028,50.7042204188456,37.8016627328734,45.8508415746013,49.417620301858,63.3892712531131,32.7050433903927,32.9708420302733,25.7381260250806,46.2486700197433,48.5211884723713,52.2262213071228,24.3989632300859,28.2696818731446,33.3384557156326,47.4611098302348,55.1507357831046,52.7153954829995,61.5773743639965,80.8671146938905,31.1287074528252,24.3838342532853,33.1759148868788,10.1452571045587,3.44169550792555,0,0,1.29955283489534,0,9.97155382935438,33.0634825801432,37.9287566720188,31.0938825569099,53.5204995151386,28.2318250311499,30.5766287647975,42.6640021891999,33.339620315727,33.6968621081881,34.88118670602,6.73684890342454,22.5275958773039,50.7672115601701,31.921300124969,57.8484408793068,50.7354093963329,73.7033712302324,44.8012974187035,41.7213083214523,3.21353458054686,13.3031408366319,7.07688441559899,27.5003644910596,11.4837589599405,18.4252596191384,9.31958806090611,35.7192572354088,42.9365748967583,3.32094171771169,9.82484020948546,13.197860081855,12.1987417990142,36.5489160147767,37.972550033946,32.1675141408933,57.3620256634512,52.1659532953874,35.5317556196848,49.6458264987338,33.5051507067541,20.1539292388351,11.1198013710817,29.4618598241064,48.9252865539766,58.8549387349691,63.2018075616776,85.9017461663576,85.9981349272784,111.458936647819,93.6080228351691,154.96331907267,16.5987354558289,33.8499883500397,48.9144125175778,38.3592531748256,68.9557178079483,52.237824978325,78.1972118350185,16.9179126795719,11.2354109970118,6.94839349209731,8.24074148247219,28.7904823824348,39.6349041368053,37.4529087838911,34.3279866598555,45.4525375336503,41.9606547053669,42.5537118893246,42.3871974211398,35.2631333948852,30.2790123840804,28.4009712856835,15.5652114328043,13.4503988431306,14.0512073786272,11.6759584321523,47.7358183240569,39.4124665412659,0.660837565967596,3.43785736662608,23.8882840599462,28.3328739669735,19.0723842756698,13.5127961497639,13.3426826306922,11.223311940641,4.74529061544512,10.8701310117847,9.80207314321051,12.5342577385925,10.3330966173134,7.19055526923377,6.48414149624083,3.98282546508734,15.9321036800589,36.9022695729424,32.6852433451933,39.508357601991,34.1356377415021,28.4751428754693,30.0373551340222,19.4845395333075,24.0208053597303,19.8669433914099,0.889357881261447,2.8363667971736,4.32429789249047,2.9232074610031,1.42002084971952,0.964708639009667,2.29163266603278,2.01387296215567,2.7562988551756,2.47105271869273,7.18841032636773,2.97712758134803,3.74445207737473,3.03094653536534,2.15276896226295,1.4473305640901,14.2259956428286,26.3393062360974,24.4447464663039,29.7053900106579,26.5199980566007,17.5881570313907,8.80761471278251,11.5128852236101,12.9260818167077,11.9590932410338,12.5969267239415,16.0586048421423,16.0597033135283,14.6095549167327,13.5712155545345,49.4954172275026,14.2611639175521,13.2449638226272,29.8624097377293,36.921681276544,29.6722251131783,13.1284882146274,103.802204187948,117.522062033288,112.235590218788,74.0803273652911,73.5235624471901,62.2768367735431,97.1545684019746,93.2296186737085,83.801008924663,57.1951943230817,16.1811697137426,21.7240036474051,28.6681048462294,21.4461159864296,10.619611067197,23.0641604347232,17.5347663039556,17.3516673375426,10.6308681437078,25.517117279346,18.3484088149437,26.1744285223804,19.9638531895444,12.009396801561,7.37930260024991,4.12542172992747,74.5562736600796,51.4974728929547,29.6231385862508,64.0867734744461,82.2858684100149,56.0078087270502,55.2884709223126,30.1420299623453,7.50949465803873,2.75381692122966,55.5731563098504,17.9726015706213,56.6740137702628,43.2443671734878,27.097522088712,16.7423717739962,7.86998258900597,26.5158181875029,8.37267315909478,23.5281029478074,25.5568447770202,12.0555812483002,9.70529016819279,10.7525741407066,17.3377998593732,18.6135431590465,14.2345973018557,41.0508365746499,21.8271835570983,30.904559003281,34.4537037221546,36.3813635065176,52.6253778628288,41.40335434014,30.251164795473,28.0078857922912,8.16574331738295,17.3975007664339,9.01908701894705,9.41954240077066,11.0857188606255,28.9732270632631,32.4191156929105,40.0426017413144,34.7377426391432,24.0878111961308,16.3580577304109,14.0118790079084,7.77681016896237,12.324433704499,7.09538253515575,9.96296284498824,5.71651621102298,7.16106782669926,4.56967115996909,4.68762253127878,4.13530676088816,6.86571859647404,5.56309688581499,6.15039729334727,8.38137774361871,9.52497232239262,12.5058285334279,40.3580082835076,17.314904363177,4.75483440030221,5.54019234001459,42.5017106870819,30.5922434985427,11.721703953105,35.3707825480459,28.0880378259804,72.2882358549845,74.5726883141627,67.0287750724094,61.8671456437275,61.6574267793578,60.431511791176,70.2023400241078,59.8927200288213,57.549085940994,57.9891549162038,40.2694908626605,39.104437593301,29.1954465839569,32.0900866530148,31.0227480689414,35.8494841477528,30.4478017088213,27.8147327272507,34.659274635916,28.3020877175453,31.4314331863897,26.4076877940507,32.8681691219287,33.1650289457223,30.9002822981199,25.2435656380029,33.8382231758978,36.0740242267128,35.0273015682811,35.180541912121,34.2869252385415,34.7852580072301,41.0110246709392,29.7960154096273,32.3736268628737,31.138175704137,29.2684756596436,40.7758052728656,34.9016572583865,29.1793981262024,35.5905054372522,31.1274164306781,36.830793885272,30.0577471900774,29.1288982581524,21.9833308585392,33.6861516161388,33.9496265396311,27.3542314858446,28.4562930664175,21.3318408770788
|short_description=p1@Hmgn3
|short_description=p1@Hmgn3
}}
}}

Revision as of 08:07, 19 April 2012

Short description:p1@Hmgn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hmgn3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000161505, ENSMUST00000161796_5end
EntrezGene:Hmgn3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hmgn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G749.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.34
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D818.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D922.40
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C252.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B858.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C370.38
Mouse Astrocytes, donor2.CNhs12078.11552-120C446.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.57
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C176.66
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E148.42
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C559.82
Mouse Granule cells, donor1.CNhs12131.11713-123C324.68
Mouse Granule cells, donor2.CNhs12357.11731-123E326.45
Mouse Granule cells, donor3.CNhs12108.11636-122C724.09
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.21
Mouse Meningeal cells, donor3.CNhs12109.11639-122D125.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.79
Mouse Microglia, donor1.CNhs12629.11718-123C819.47
Mouse Microglia, donor2.CNhs12634.11736-123E830.35
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D550.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F537.80
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D945.85
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F149.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D563.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D232.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F232.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D346.25
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F348.52
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D752.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F428.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D833.34
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E447.46
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E555.15
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I652.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D661.58
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F680.87
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.13
Mouse Schwann, donor1.CNhs12507.11728-123D924.38
Mouse Schwann, donor2.CNhs12573.11746-123F933.18
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.15
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I733.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E337.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I831.09
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G653.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H128.23
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G133.34
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G233.70
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G334.88
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.74
accessory axillary lymph node, adult.CNhs10475.1063-29H922.53
adrenal gland, adult.CNhs10508.49-24D750.77
adrenal gland, embryo E14.CNhs11038.406-44C531.92
adrenal gland, embryo E16.CNhs11004.1254-43D657.85
adrenal gland, embryo E17.CNhs11043.1263-45I150.74
adrenal gland, embryo E18.CNhs11026.1262-18F573.70
adrenal gland, neonate N00.CNhs11191.1311-23C144.80
adrenal gland, neonate N25.CNhs11223.1377-27I341.72
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H113.30
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F527.50
bone (os femoris), neonate N16.CNhs11225.1525-43A611.48
bone (os femoris), neonate N20.CNhs11195.1350-25C318.43
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B235.72
cerebellum, neonate N30.CNhs11135.1395-42I242.94
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.82
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.20
corpora quadrigemina, adult.CNhs10501.16-22A436.55
corpus striatum, adult.CNhs10487.19-21D837.97
corpus striatum, neonate N00.CNhs11226.630-43F132.17
cortex, adult.CNhs10473.12-14D557.36
cortex, neonate N30.CNhs11107.1392-42F252.17
diencephalon, adult.CNhs10482.20-12F235.53
diencephalon, neonate N30.CNhs11201.1388-42B249.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B133.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.15
epididymis, adult.CNhs10490.58-23B211.12
eyeball, adult.CNhs10484.31-12G429.46
eyeball, embryo E12.CNhs11016.345-16C648.93
eyeball, embryo E14.CNhs10521.399-16E258.85
eyeball, embryo E15.CNhs10593.426-16C963.20
eyeball, embryo E17.CNhs11023.1261-18D485.90
eyeball, neonate N00.CNhs11207.633-15C686.00
eyeball, neonate N01.CNhs11140.1532-43E7111.46
eyeball, neonate N02.CNhs11205.1551-44G893.61
eyeball, neonate N16.CNhs11188.777-19A2154.96
forelimb, embryo E11.CNhs10596.335-25E216.60
forelimb, embryo E12.CNhs10600.359-14H233.85
forelimb, embryo E13.CNhs10589.384-1E248.91
forelimb, embryo E14.CNhs10577.413-26A838.36
forelimb, embryo E15.CNhs11007.437-20E768.96
forelimb, embryo E17.CNhs10598.1517-43C452.24
forelimb, embryo E18.CNhs11008.1520-43B578.20
gonad, embryo E13.CNhs11044.1564-45I616.92
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.24
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.24
heart, embryo E11.CNhs10586.331-24E928.79
heart, embryo E12.CNhs11015.353-12F539.63
heart, embryo E13.CNhs11013.376-3I937.45
heart, embryo E14.CNhs10597.403-26D434.33
heart, embryo E15.CNhs11017.431-16C845.45
heart, embryo E16.CNhs11021.457-17C641.96
heart, embryo E17.CNhs11025.479-18E542.55
heart, embryo E18.CNhs11030.1283-20G342.39
heart, neonate N00.CNhs11213.639-21E335.26
heart, neonate N03.CNhs11221.1349-25I230.28
heart, neonate N10.CNhs11118.749-24G128.40
heart, neonate N16.CNhs11209.782-15G115.57
heart, neonate N20.CNhs11127.821-26I613.45
heart, neonate N25.CNhs11196.1351-25D314.05
heart, neonate N30.CNhs11202.1390-42D211.68
hippocampus, adult.CNhs10478.13-16E847.74
hippocampus, neonate N00.CNhs11228.627-43G139.41
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I523.89
intestine, embryo E13.CNhs11010.381-16D528.33
intestine, embryo E15.CNhs10602.976-16D819.07
intestine, embryo E16.CNhs10585.463-22H413.51
intestine, embryo E17.CNhs10582.482-18D313.34
intestine, embryo E18.CNhs10526.1289-20F711.22
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E910.87
intestine, neonate N06.CNhs11102.688-20B89.80
intestine, neonate N07.CNhs11095.720-20F212.53
intestine, neonate N10.CNhs11098.755-23A510.33
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E36.48
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I915.93
kidney, embryo E15.CNhs10997.434-16F836.90
kidney, embryo E16.CNhs10584.464-22A532.69
kidney, embryo E17.CNhs11028.483-18I239.51
kidney, embryo E18.CNhs11001.1288-20C734.14
kidney, neonate N00.CNhs11214.646-21G728.48
kidney, neonate N10.CNhs11206.758-6D530.04
kidney, neonate N20.CNhs11113.832-19I119.48
kidney, neonate N25.CNhs11122.1353-25F324.02
kidney, neonate N30.CNhs11203.1385-42H119.87
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B114.23
lung, embryo E12.CNhs10522.354-16G226.34
lung, embryo E14.CNhs10604.404-26F824.44
lung, embryo E15.CNhs11020.432-17C529.71
lung, embryo E16.CNhs10998.458-17B626.52
lung, embryo E17.CNhs10605.480-44A617.59
lung, embryo E18.CNhs10583.1287-20I68.81
lung, neonate N00.CNhs11224.640-42C611.51
lung, neonate N06.CNhs11212.683-20E512.93
lung, neonate N07.CNhs11111.715-19A311.96
lung, neonate N10.CNhs11219.750-23E612.60
lung, neonate N20.CNhs11109.822-18A416.06
lung, neonate N25.CNhs11119.1359-25C716.06
lung, neonate N30.CNhs11133.1394-42H214.61
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A149.50
mammary gland, adult lactating day02.CNhs10480.595-22B614.26
mammary gland, adult pregnant day19.CNhs10476.588-5H213.24
medulla oblongata, adult.CNhs10477.17-12C229.86
medulla oblongata, neonate N30.CNhs11200.1396-42A336.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C729.67
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.13
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1103.80
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2117.52
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3112.24
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D774.08
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D873.52
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D962.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D497.15
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D593.23
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D683.80
olfactory brain, adult.CNhs10489.18-22I957.20
ovary, adult.CNhs10507.91-2I716.18
ovary, embryo E18.CNhs11040.505-44H721.72
ovary, neonate N00.CNhs11217.1299-22I428.67
oviduct, adult pregnant day01.CNhs10500.988-6G621.45
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F423.06
pancreas, embryo E15.CNhs11042.1556-45F217.53
pancreas, embryo E16.CNhs11003.460-26E517.35
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I725.52
pancreas, neonate N00.CNhs11105.645-26G918.35
pancreas, neonate N01.CNhs11138.1531-43D726.17
pancreas, neonate N02.CNhs11139.1539-43D819.96
pancreas, neonate N16.CNhs11136.787-43B612.01
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G874.56
pituitary gland, embryo E12.CNhs11018.346-16E651.50
pituitary gland, embryo E13.CNhs11009.370-44C729.62
pituitary gland, embryo E14.CNhs11037.398-44A564.09
pituitary gland, embryo E15.CNhs10592.427-16B982.29
pituitary gland, embryo E16.CNhs11036.449-43F656.01
pituitary gland, embryo E17.CNhs11039.1265-44F555.29
pituitary gland, neonate N00.CNhs11190.1308-22E930.14
placenta, adult pregnant day10.CNhs10472.539-13I77.51
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F855.57
skin, adult.CNhs10492.30-1C317.97
skin, neonate N00.CNhs11124.650-25G456.67
skin, neonate N03.CNhs11215.662-22H343.24
skin, neonate N06.CNhs11097.693-20I527.10
skin, neonate N10.CNhs11108.762-6C416.74
small intestine, neonate N16.CNhs11114.790-21I17.87
spinal cord, adult.CNhs10505.24-13C926.52
spleen, adult.CNhs10465.25-2G28.37
spleen, embryo E16.CNhs11035.461-43C123.53
spleen, embryo E18.CNhs11011.1271-21F225.56
spleen, neonate N10.CNhs11116.752-24D112.06
spleen, neonate N20.CNhs11112.824-19H19.71
spleen, neonate N25.CNhs11099.1354-25G310.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C918.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.23
stomach, adult.CNhs10503.33-1H641.05
stomach, embryo E12.CNhs10588.356-43E321.83
stomach, embryo E15.CNhs10603.1252-16G830.90
stomach, embryo E16.CNhs11022.459-17D434.45
stomach, embryo E17.CNhs11006.1035-18D536.38
stomach, embryo E18.CNhs10999.1286-20C652.63
stomach, neonate N03.CNhs11193.1340-24B841.40
stomach, neonate N07.CNhs11210.718-18A930.25
stomach, neonate N25.CNhs11104.1355-25E428.01
stomach, neonate N30.CNhs11134.1386-42I18.17
submandibular gland, adult.CNhs10469.59-29C117.40
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F59.42
testis, embryo E15.CNhs11034.443-27C511.09
testis, embryo E16.CNhs11033.470-26G528.97
testis, embryo E17.CNhs11029.486-18I532.42
testis, embryo E18.CNhs11027.503-18G540.04
testis, neonate N00.CNhs11189.1300-22B734.74
testis, neonate N07.CNhs11222.726-26I424.09
testis, neonate N10.CNhs11204.763-44D916.36
testis, neonate N20.CNhs11110.839-18H314.01
testis, neonate N30.CNhs11130.1391-42E27.78
thymus, adult.CNhs10471.38-12B512.32
thymus, embryo E14.CNhs11041.402-44I47.10
thymus, embryo E15.CNhs11005.430-45I29.96
thymus, embryo E16.CNhs11002.456-26C55.72
thymus, embryo E17.CNhs10581.478-18C17.16
thymus, embryo E18.CNhs10595.1273-19G44.57
thymus, neonate N02.CNhs11181.1541-43F84.69
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C46.87
thymus, neonate N07.CNhs11211.713-19D35.56
thymus, neonate N10.CNhs11194.748-24E46.15
thymus, neonate N20.CNhs11186.820-7A28.38
thymus, neonate N25.CNhs11125.1362-25G79.52
thymus, neonate N30.CNhs11132.1393-42G212.51
tongue, adult.CNhs10499.32-1B440.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H317.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.75
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.54
urinary bladder, adult.CNhs10481.879-12E442.50
uterus, adult pregnant day19.CNhs10497.590-15F530.59
uterus, adult.CNhs10509.92-27E511.72
vagina, adult.CNhs10502.89-27D535.37
vesicular gland, adult.CNhs10491.51-27F828.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A172.29
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A274.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A367.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D761.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A461.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A560.43
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A670.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A759.89
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A857.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A957.99
whole body, embryo E11.CNhs11014.324-5I840.27
whole body, embryo E12.CNhs10587.857-27C939.10
whole body, embryo E13.CNhs10512.372-23H229.20
whole body, embryo E14.5.CNhs10578.420-27D232.09
whole body, embryo E14.CNhs10519.395-14B131.02
whole body, embryo E16.CNhs10514.453-14F235.85
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G530.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G527.81
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G534.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G528.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G531.43
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G532.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G533.17
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G533.84
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G536.07
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G535.03
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G535.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G534.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G534.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G541.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G529.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G532.37
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G531.14
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G529.27
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G540.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G534.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.18
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G535.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G531.13
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G536.83
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G530.06
whole body, embryo E17.5.CNhs10513.490-9F929.13
whole body, embryo E17.CNhs10517.475-3I521.98
whole body, embryo E18.CNhs10516.493-3B333.69
whole body, neonate N00.CNhs10525.657-19C233.95
whole body, neonate N01.CNhs10576.659-23C627.35
whole body, neonate N06.CNhs10515.692-21D128.46
whole body, neonate N10.CNhs10518.761-6B421.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:83040135..83040195,-&oldid=1048053"