CL:1000487: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:1000487
|name=smooth muscle cell of prostate
|namespace=cell
|def="A smooth muscle cell that is part of the prostate gland." [GOC:tfm]
|xref=FMA:84583
|is_a=...") |
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Revision as of 17:42, 15 June 2012
| Name: | smooth muscle cell of prostate | ||
|---|---|---|---|
| Namespace: | cell | ||
| Definition: | "A smooth muscle cell that is part of the prostate gland." [GOC:tfm] | ||
| Xrefs: |
| ||
| Synonyms: | "smooth muscle fiber of prostate" EXACT [FMA:84583] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000192(smooth muscle cell) |
|---|---|
| part_of: | UBERON:0002367(prostate gland) |
Children
| derives from: | FF:0000183 (human smooth muscle cell of prostate sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11257-116F6 (Smooth Muscle Cells - Prostate, donor1)
- 11335-117F3 (Smooth Muscle Cells - Prostate, donor2)
- 11465-119B7 (Smooth Muscle Cells - Prostate, donor3)
Mouse (Mus musculus)
- 11257-116F6 (Smooth Muscle Cells - Prostate, donor1)
- 11335-117F3 (Smooth Muscle Cells - Prostate, donor2)
- 11465-119B7 (Smooth Muscle Cells - Prostate, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000487 (smooth muscle cell of prostate), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.74e-50 | FFCP PHASE2:Hg19::chr5:1042544..1042553,+#_549d13e449b81c799a709395247b88a8 | p@chr5:1042544..1042553, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr5:1042544..1042553,+#_549d13e449b81c799a709395247b88a8 | p@chr5:1042544..1042553, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr5:1043105..1043109,+#_73b7c0a3e31503b3fd9b4e2edacb4125 | p@chr5:1043105..1043109, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr5:1043105..1043109,+#_73b7c0a3e31503b3fd9b4e2edacb4125 | p@chr5:1043105..1043109, + |
| 3.61e-34 | FFCP PHASE2:Hg19::chr5:1044530..1044539,+#_fb042cf4560748050e4b0490b23a7e93 | p@chr5:1044530..1044539, + |
| 3.61e-34 | FFCP PHASE1:Hg19::chr5:1044530..1044539,+#_fb042cf4560748050e4b0490b23a7e93 | p@chr5:1044530..1044539, + |
| 3.61e-34 | FFCP PHASE2:Hg19::chr5:1045108..1045137,+#_fb042cf4560748050e4b0490b23a7e93 | p@chr5:1045108..1045137, + |
| 3.61e-34 | FFCP PHASE1:Hg19::chr5:1045108..1045137,+#_fb042cf4560748050e4b0490b23a7e93 | p@chr5:1045108..1045137, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr5:1049320..1049333,+#_67ef2221eee01603e7786033eb4201aa | p@chr5:1049320..1049333, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr5:1049320..1049333,+#_67ef2221eee01603e7786033eb4201aa | p@chr5:1049320..1049333, + |
| 3.46e-31 | FFCP PHASE1:Hg19::chr1:192735472..192735488,-#_f60beab36058aee94ba162429a76fac7 | p@chr1:192735472..192735488, - |
| 3.46e-31 | FFCP PHASE2:Hg19::chr1:192735472..192735488,-#_f60beab36058aee94ba162429a76fac7 | p@chr1:192735472..192735488, - |
| 1.92e-29 | FFCP PHASE2:Hg19::chr16:86498111..86498151,-#_03fcfb6df34832159b6c1e0e7d9ca271 | p@chr16:86498111..86498151, - |
| 1.92e-29 | FFCP PHASE1:Hg19::chr16:86498111..86498151,-#_03fcfb6df34832159b6c1e0e7d9ca271 | p@chr16:86498111..86498151, - |
| 2.74e-27 | FFCP PHASE1:Hg19::chr16:86547373..86547391,+#_b4cd42b02d7d7c73952ee32e47493d2c | p@chr16:86547373..86547391, + |
| 2.74e-27 | FFCP PHASE2:Hg19::chr16:86547373..86547391,+#_b4cd42b02d7d7c73952ee32e47493d2c | p@chr16:86547373..86547391, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr13:24153617..24153622,+#_2076671e2b0226be109ea8a64faf1252 | p11@TNFRSF19 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr13:24153617..24153622,+#_2076671e2b0226be109ea8a64faf1252 | p11@TNFRSF19 |
| 2.97e-24 | FFCP PHASE1:Hg19::chr7:136554042..136554052,+#_ecc3100b167744c2b73a3ad747296e31 | p8@CHRM2 |
| 2.97e-24 | FFCP PHASE2:Hg19::chr7:136554042..136554052,+#_ecc3100b167744c2b73a3ad747296e31 | p8@CHRM2 |
| 1.2e-22 | FFCP PHASE2:Hg19::chr5:92919596..92919609,+#_7d590d2952bb699b0ca71f37e501f77c | p@chr5:92919596..92919609, + |
| 1.2e-22 | FFCP PHASE1:Hg19::chr5:92919596..92919609,+#_7d590d2952bb699b0ca71f37e501f77c | p@chr5:92919596..92919609, + |
| 6.69e-22 | FFCP PHASE1:Hg19::chr16:86498340..86498362,-#_aad13d9328736285f3c0ab5997bdd4c8 | p@chr16:86498340..86498362, - |
| 6.69e-22 | FFCP PHASE2:Hg19::chr16:86498340..86498362,-#_aad13d9328736285f3c0ab5997bdd4c8 | p@chr16:86498340..86498362, - |
| 1.26e-21 | FFCP PHASE2:Hg19::chr3:187009798..187009812,-#_fc44ba5b20cdd437d5fcaaa222abd8f3 | p5@MASP1 |
| 1.26e-21 | FFCP PHASE1:Hg19::chr3:187009798..187009812,-#_fc44ba5b20cdd437d5fcaaa222abd8f3 | p5@MASP1 |
| 3.81e-21 | FFCP PHASE1:Hg19::chr8:102344320..102344363,-#_26ffa9cb64bf5b21cf7b69f458e7bb75 | p@chr8:102344320..102344363, - |
| 3.81e-21 | FFCP PHASE2:Hg19::chr15:51669607..51669617,+#_26ffa9cb64bf5b21cf7b69f458e7bb75 | p6@GLDN |
| 3.81e-21 | FFCP PHASE1:Hg19::chr15:51669607..51669617,+#_26ffa9cb64bf5b21cf7b69f458e7bb75 | p6@GLDN |
| 3.81e-21 | FFCP PHASE2:Hg19::chr8:102344320..102344363,-#_26ffa9cb64bf5b21cf7b69f458e7bb75 | p@chr8:102344320..102344363, - |
| 4.66e-21 | FFCP PHASE2:Hg19::chr10:28033817..28033825,+#_5ce9849f58f41391f1be08dd5a7db84f | p2@ENST00000419777 |
| 4.66e-21 | FFCP PHASE1:Hg19::chr10:28033817..28033825,+#_5ce9849f58f41391f1be08dd5a7db84f | p2@ENST00000419777 |
| 7.43e-18 | FFCP PHASE2:Hg19::chr19:1038801..1038822,+#_68bd64fb4f8c358278d866c5e9fa78da | p@chr19:1038801..1038822, + |
| 7.43e-18 | FFCP PHASE1:Hg19::chr19:1038801..1038822,+#_68bd64fb4f8c358278d866c5e9fa78da | p@chr19:1038801..1038822, + |
| 9.07e-18 | FFCP PHASE2:Hg19::chr3:138666329..138666339,-#_fa3f2fec4748756b66d9a6bbae86124d | p10@FOXL2 |
| 9.07e-18 | FFCP PHASE2:Hg19::chr5:134369177..134369188,+#_fa3f2fec4748756b66d9a6bbae86124d | p2@ENST00000505828 |
| 9.07e-18 | FFCP PHASE1:Hg19::chr5:134369177..134369188,+#_fa3f2fec4748756b66d9a6bbae86124d | p2@ENST00000505828 |
| 9.07e-18 | FFCP PHASE2:Hg19::chr5:134369500..134369515,-#_fa3f2fec4748756b66d9a6bbae86124d | p13@PITX1 |
| 9.07e-18 | FFCP PHASE1:Hg19::chr3:138666329..138666339,-#_fa3f2fec4748756b66d9a6bbae86124d | p10@FOXL2 |
| 9.07e-18 | FFCP PHASE1:Hg19::chr5:134369500..134369515,-#_fa3f2fec4748756b66d9a6bbae86124d | p13@PITX1 |
| 1.27e-17 | FFCP PHASE1:Hg19::chr10:28035746..28035751,-#_090ef2f1b668303e2f3ec7e6301dacd4 | p@chr10:28035746..28035751, - |
| 1.27e-17 | FFCP PHASE2:Hg19::chr10:28035746..28035751,-#_090ef2f1b668303e2f3ec7e6301dacd4 | p@chr10:28035746..28035751, - |
| 1.34e-17 | FFCP PHASE1:Hg19::chr5:92922801..92922812,+#_9620be041a72f63fbcb5b1ec08678638 | p20@NR2F1 |
| 1.34e-17 | FFCP PHASE2:Hg19::chr5:92922801..92922812,+#_9620be041a72f63fbcb5b1ec08678638 | p20@NR2F1 |
| 3.98e-17 | FFCP PHASE1:Hg19::chr17:59485435..59485452,+#_0296559007cfa7dd50a69705f98ad910 | p@chr17:59485435..59485452, + |
| 3.98e-17 | FFCP PHASE2:Hg19::chr17:59485435..59485452,+#_0296559007cfa7dd50a69705f98ad910 | p@chr17:59485435..59485452, + |
| 3.44e-16 | FFCP PHASE1:Hg19::chr4:120549834..120549846,-#_ef2ea7fb3ec031470b3531710e5527ef | p15@PDE5A |
| 3.44e-16 | FFCP PHASE2:Hg19::chr4:120549834..120549846,-#_ef2ea7fb3ec031470b3531710e5527ef | p15@PDE5A |
| 1.15e-15 | FFCP PHASE2:Hg19::chr2:238283417..238283428,-#_5bdefcd04e9ebbd53c445f67e6b9841a | p@chr2:238283417..238283428, - |
| 1.15e-15 | FFCP PHASE1:Hg19::chr2:238283417..238283428,-#_5bdefcd04e9ebbd53c445f67e6b9841a | p@chr2:238283417..238283428, - |
| 1.78e-15 | FFCP PHASE2:Hg19::chr4:120549931..120549938,-#_31d331e6b9778505f38471b692aace43 | p21@PDE5A |
| 1.78e-15 | FFCP PHASE1:Hg19::chr4:120549931..120549938,-#_31d331e6b9778505f38471b692aace43 | p21@PDE5A |
| 2.05e-15 | FFCP PHASE1:Hg19::chr1:75180314..75180323,-#_734b3e9bd325d3ae597a28fe55e64280 | p@chr1:75180314..75180323, - |
| 2.05e-15 | FFCP PHASE2:Hg19::chr1:75180314..75180323,-#_734b3e9bd325d3ae597a28fe55e64280 | p@chr1:75180314..75180323, - |
| 2.74e-15 | FFCP PHASE2:Hg19::chr4:148885940..148885946,+#_955b305d7c1b489e641fc66697a77e6d | p@chr4:148885940..148885946, + |
| 2.74e-15 | FFCP PHASE2:Hg19::chr9:72673..72678,+#_955b305d7c1b489e641fc66697a77e6d | p1@uc003zfx.2 |
| 2.74e-15 | FFCP PHASE1:Hg19::chr4:148885940..148885946,+#_955b305d7c1b489e641fc66697a77e6d | p@chr4:148885940..148885946, + |
| 2.74e-15 | FFCP PHASE1:Hg19::chr9:72673..72678,+#_955b305d7c1b489e641fc66697a77e6d | p1@uc003zfx.2 |
| 1.68e-14 | FFCP PHASE1:Hg19::chr21:28338948..28338976,-#_f12c308f9afbd3b7024955009a766d68 | p10@ADAMTS5 |
| 1.68e-14 | FFCP PHASE2:Hg19::chr21:28338948..28338976,-#_f12c308f9afbd3b7024955009a766d68 | p10@ADAMTS5 |
| 4.77e-14 | FFCP PHASE1:Hg19::chr5:34915414..34915420,+#_0b9fd9c1b378b2e530db1267fe560a00 | p4@BRIX1 |
| 4.77e-14 | FFCP PHASE2:Hg19::chr5:34915414..34915420,+#_0b9fd9c1b378b2e530db1267fe560a00 | p4@BRIX1 |
| 6.43e-14 | FFCP PHASE1:Hg19::chr5:1043617..1043642,+#_97b3c38e596bd9b3ee6c1971ba8b397c | p@chr5:1043617..1043642, + |
| 6.43e-14 | FFCP PHASE2:Hg19::chr5:1043617..1043642,+#_97b3c38e596bd9b3ee6c1971ba8b397c | p@chr5:1043617..1043642, + |
| 1.07e-13 | FFCP PHASE2:Hg19::chr14:33088589..33088594,+#_52d822b8ea284a362b4774ef5ab13357 | p@chr14:33088589..33088594, + |
| 1.07e-13 | FFCP PHASE2:Hg19::chr3:138665702..138665729,-#_52d822b8ea284a362b4774ef5ab13357 | p7@FOXL2 |
| 1.07e-13 | FFCP PHASE1:Hg19::chr14:33088589..33088594,+#_52d822b8ea284a362b4774ef5ab13357 | p@chr14:33088589..33088594, + |
| 1.07e-13 | FFCP PHASE1:Hg19::chr3:138665702..138665729,-#_52d822b8ea284a362b4774ef5ab13357 | p7@FOXL2 |
| 2.2e-13 | FFCP PHASE2:Hg19::chr9:101832450..101832468,+#_7deb2c315a0b3adfac826115bffc2109 | p@chr9:101832450..101832468, + |
| 2.2e-13 | FFCP PHASE1:Hg19::chr9:101832450..101832468,+#_7deb2c315a0b3adfac826115bffc2109 | p@chr9:101832450..101832468, + |
| 2.32e-12 | FFCP PHASE2:Hg19::chr1:110466067..110466076,+#_5ebbb1c4f9639b6922be6cc3a0ab3dd8 | p@chr1:110466067..110466076, + |
| 2.32e-12 | FFCP PHASE1:Hg19::chr1:110466067..110466076,+#_5ebbb1c4f9639b6922be6cc3a0ab3dd8 | p@chr1:110466067..110466076, + |
| 2.68e-12 | FFCP PHASE2:Hg19::chr2:134024392..134024406,-#_54d16a6cc2822d8c1976735b16f29840 | p@chr2:134024392..134024406, - |
| 2.68e-12 | FFCP PHASE1:Hg19::chr2:134024392..134024406,-#_54d16a6cc2822d8c1976735b16f29840 | p@chr2:134024392..134024406, - |
| 2.7e-12 | FFCP PHASE2:Hg19::chr3:170150765..170150776,+#_5660715a5a60517be8b96d4c43d842a6 | p14@CLDN11 |
| 2.7e-12 | FFCP PHASE1:Hg19::chr3:170150765..170150776,+#_5660715a5a60517be8b96d4c43d842a6 | p14@CLDN11 |
| 2.79e-12 | FFCP PHASE1:Hg19::chr11:9797253..9797262,+#_dca05f5fff9aab32c05abf965ff5ec27 | p2@ENST00000534671 |
| 2.79e-12 | FFCP PHASE2:Hg19::chr11:9797253..9797262,+#_dca05f5fff9aab32c05abf965ff5ec27 | p2@ENST00000534671 |
| 3.24e-12 | FFCP PHASE1:Hg19::chr10:127569398..127569410,-#_1818d09524a31f63d23acd8564c92ca6 | p5@DHX32 |
| 3.24e-12 | FFCP PHASE2:Hg19::chr10:127569398..127569410,-#_1818d09524a31f63d23acd8564c92ca6 | p5@DHX32 |
| 5.1e-12 | FFCP PHASE1:Hg19::chr2:217559893..217559904,-#_0330cf7dc6cdb63a723f882266353c49 | p39@IGFBP5 |
| 5.1e-12 | FFCP PHASE2:Hg19::chr2:217559893..217559904,-#_0330cf7dc6cdb63a723f882266353c49 | p39@IGFBP5 |
| 6.76e-12 | FFCP PHASE1:Hg19::chr2:26972981..26973006,+#_dfd14f9eaf284e26339e97509e1fd11a | p@chr2:26972981..26973006, + |
| 6.76e-12 | FFCP PHASE2:Hg19::chr2:26972981..26973006,+#_dfd14f9eaf284e26339e97509e1fd11a | p@chr2:26972981..26973006, + |
| 6.89e-12 | FFCP PHASE1:Hg19::chr9:101706279..101706284,+#_e99653b30b3b754c26a188331de2a14f | p13@COL15A1 |
| 6.89e-12 | FFCP PHASE2:Hg19::chr9:101706279..101706284,+#_e99653b30b3b754c26a188331de2a14f | p13@COL15A1 |
| 8.61e-12 | FFCP PHASE2:Hg19::chr1:21766691..21766715,+#_0de2af2cd47bb14498a9f963bb99dc89 | p3@NBPF3 |
| 8.61e-12 | FFCP PHASE1:Hg19::chr1:21766691..21766715,+#_0de2af2cd47bb14498a9f963bb99dc89 | p3@NBPF3 |
| 1.82e-11 | FFCP PHASE2:Hg19::chr5:1041879..1041917,+#_9b8531bf9fb8561a4958766fdf4ba643 | p@chr5:1041879..1041917, + |
| 1.82e-11 | FFCP PHASE1:Hg19::chr5:1041879..1041917,+#_9b8531bf9fb8561a4958766fdf4ba643 | p@chr5:1041879..1041917, + |
| 2.02e-11 | FFCP PHASE2:Hg19::chr3:170150640..170150647,+#_0e8a0abb9bbbf42a151e0c11d54a646d | p@chr3:170150640..170150647, + |
| 2.02e-11 | FFCP PHASE1:Hg19::chr3:170150640..170150647,+#_0e8a0abb9bbbf42a151e0c11d54a646d | p@chr3:170150640..170150647, + |
| 2.23e-11 | FFCP PHASE2:Hg19::chr5:134367045..134367056,-#_8cf9919b9fccde8b697113e0d5b6a76c | p@chr5:134367045..134367056, - |
| 2.23e-11 | FFCP PHASE1:Hg19::chr5:134367045..134367056,-#_8cf9919b9fccde8b697113e0d5b6a76c | p@chr5:134367045..134367056, - |
| 2.34e-11 | FFCP PHASE2:Hg19::chr16:86256667..86256687,-#_397d14731bf8aafb6e7705f6b4ea85d1 | p@chr16:86256667..86256687, - |
| 2.34e-11 | FFCP PHASE1:Hg19::chr16:86256667..86256687,-#_397d14731bf8aafb6e7705f6b4ea85d1 | p@chr16:86256667..86256687, - |
| 2.46e-11 | FFCP PHASE2:Hg19::chr16:86542381..86542392,-#_c28988f041f5e287f8da8a5a03ddad70 | p1@ENST00000499071 |
| 2.46e-11 | FFCP PHASE1:Hg19::chr16:86542381..86542392,-#_c28988f041f5e287f8da8a5a03ddad70 | p1@ENST00000499071 |
| 2.73e-11 | FFCP PHASE2:Hg19::chr9:132390755..132390781,+#_1ba768eac4a928615e1ffcd608bd0146 | p7@METTL11A |
| 2.73e-11 | FFCP PHASE1:Hg19::chr9:132390755..132390781,+#_1ba768eac4a928615e1ffcd608bd0146 | p7@METTL11A |
