Swissregulon:RXR(A,B,G) (NR1H2,PPAR)dimers.p1: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{SwissregulonMotif
|datasource=http://www.swissregulon.unibas.ch/
|name=RXR{A,B,G}_{NR1H2,PPAR}dimers.p1
|associated_transcription_factors=1.000:7376:NR1H2:nuclear recepto...") |
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|associated_transcription_factors=1.000:7376:NR1H2:nuclear receptor subfamily 1, group H, member 2::NM_007121:NER,NER-I,RIP15,LXR-b;1.000:6256:RXRA:retinoid X receptor, alpha::NM_002957:NR2B1;1.000:5468:PPARG:peroxisome proliferator-activated receptor gamma::NM_138712:PPARG1,PPARG2,NR1C3,PPARgamma;0.996:5465:PPARA:peroxisome proliferator-activated receptor alpha::NM_005036:hPPAR,NR1C1;0.934:6257:RXRB:retinoid X receptor, beta::NM_021976:NR2B2,H-2RIIBP,RCoR-1;0.926:6258:RXRG:retinoid X receptor, gamma::NM_006917:NR2B3 | |associated_transcription_factors=1.000:7376:NR1H2:nuclear receptor subfamily 1, group H, member 2::NM_007121:NER,NER-I,RIP15,LXR-b;1.000:6256:RXRA:retinoid X receptor, alpha::NM_002957:NR2B1;1.000:5468:PPARG:peroxisome proliferator-activated receptor gamma::NM_138712:PPARG1,PPARG2,NR1C3,PPARgamma;0.996:5465:PPARA:peroxisome proliferator-activated receptor alpha::NM_005036:hPPAR,NR1C1;0.934:6257:RXRB:retinoid X receptor, beta::NM_021976:NR2B2,H-2RIIBP,RCoR-1;0.926:6258:RXRG:retinoid X receptor, gamma::NM_006917:NR2B3 | ||
|weight_matrix=NA:RXR{A,B,G}_{NR1H2,PPAR}dimers.p1;PO:A:C:G:T;01:21.638521:30.284041:41.02552:15.202055;02:18.911356:35.304428:29.083821:24.850532;03:46.231891:22.153705:21.594792:18.169749;04:31.302025:13.880165:53.968965:8.998982;05:52.725546:0.943497:52.685607:1.795487;06:5.287568:1.74595:92.916716:8.199903;07:3.506865:1.518194:89.899575:13.225503;08:4.952063:7.671139:7.564018:87.962917;09:3.982027:74.220446:19.173331:10.774333;10:102.254572:1.994424:3.258704:0.642437;11:82.761922:4.535864:20.049282:0.803069;12:88.716526:0:19.433611:0;13:3.304236:3.547247:99.504937:1.793717;14:4.381756:3.404654:84.296768:16.066959;15:1.985986:8.076619:5.88315:92.204382;16:3.348433:87.534671:10.421943:6.84509;17:92.818441:4.002951:9.527542:1.801203;18:41.682535:25.83999:29.968326:10.659286;19:25.910039:26.505655:37.866592:17.867851;20:22.490234:19.79477:37.313486:28.551647 | |weight_matrix=NA:RXR{A,B,G}_{NR1H2,PPAR}dimers.p1;PO:A:C:G:T;01:21.638521:30.284041:41.02552:15.202055;02:18.911356:35.304428:29.083821:24.850532;03:46.231891:22.153705:21.594792:18.169749;04:31.302025:13.880165:53.968965:8.998982;05:52.725546:0.943497:52.685607:1.795487;06:5.287568:1.74595:92.916716:8.199903;07:3.506865:1.518194:89.899575:13.225503;08:4.952063:7.671139:7.564018:87.962917;09:3.982027:74.220446:19.173331:10.774333;10:102.254572:1.994424:3.258704:0.642437;11:82.761922:4.535864:20.049282:0.803069;12:88.716526:0:19.433611:0;13:3.304236:3.547247:99.504937:1.793717;14:4.381756:3.404654:84.296768:16.066959;15:1.985986:8.076619:5.88315:92.204382;16:3.348433:87.534671:10.421943:6.84509;17:92.818441:4.002951:9.527542:1.801203;18:41.682535:25.83999:29.968326:10.659286;19:25.910039:26.505655:37.866592:17.867851;20:22.490234:19.79477:37.313486:28.551647 | ||
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| |||
}} | }} |
Revision as of 11:25, 16 February 2012
recognized by
- NR1H2 ( EntrezGene:7376 )
- RXRA ( EntrezGene:6256 )
- PPARG ( EntrezGene:5468 )
- PPARA ( EntrezGene:5465 )
- RXRB ( EntrezGene:6257 )
- RXRG ( EntrezGene:6258 )
(data source: http://www.swissregulon.unibas.ch/)
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Motif Activities (MARA) on Phase1 data
hg19
Chart |
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Sample of clicked point: |
mm9
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Chart |
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Sample of clicked point: |