Personal tools

UBERON:0002410: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 4: Line 4:
|namespace=
|namespace=
|def="The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands[GO]." [Wikipedia:Autonomic_nervous_system]
|def="The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands[GO]." [Wikipedia:Autonomic_nervous_system]
|xref=AAO:0000033;;BTO:0002507;;EHDA:10095;;EHDAA:3767;;EMAPA:16984;;FMA:9905;;GAID:706;;http://upload.wikimedia.org/wikipedia/commons/thumb/f/f7/Gray839.png/200px-Gray839.png;;MA:0000219;;MESH:A.08.800.050;;ncithesaurus:Autonomic_Nervous_System;;NIF_GrossAnatomy:birnlex_1123;;SCTID:362481007;;TAO:0001574;;VHOG:0000396;;ZFA:0001574
|xref=AAO:0000033;;BTO:0002507;;EHDA:10095;;EHDAA:3767;;EMAPA:16984;;FMA:9905;;GAID:706;;http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png;;http://upload.wikimedia.org/wikipedia/commons/thumb/f/f7/Gray839.png/200px-Gray839.png;;MA:0000219;;MESH:A.08.800.050;;ncithesaurus:Autonomic_Nervous_System;;NIF_GrossAnatomy:birnlex_1123;;SCTID:362481007;;TAO:0001574;;VHOG:0000396;;ZFA:0001574
|is_a=UBERON:0000073
|is_a=UBERON:0004121;;UBERON:0011216
|synonym="ANS" RELATED [];;"visceral nervous system" EXACT []
|synonym="ANS" RELATED [];;"divisio autonomica systematis nervosi peripherici" RELATED LATIN [Wikipedia:Autonomic_nervous_system];;"visceral nervous system" EXACT []
|comment=This class was created automatically from a combination of ontologies
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_9905-MA_0000219-ZFA_0001574
|alt_id=UBERON:FMA_9905-MA_0000219-ZFA_0001574
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=uberon_slim;;vertebrate_core
|subset=uberon_slim;;vertebrate_core
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0000010;;UBERON:0001016
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Part of the peripheral nervous system which regulates involuntary functions of the body and consists of the sympathetic and parasympathetic system.[AAO]" xsd:string
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:02, 26 June 2012

Name:autonomic nervous system
Definition:"The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands[GO]." [Wikipedia:Autonomic_nervous_system]
Xrefs:
links:

AAO:0000033
BTO:0002507
EHDA:10095
EHDAA:3767
EMAPA:16984
FMA:9905
GAID:706
[ Gray839.png Gray839.png]
[ 200px-Gray839.png 200px-Gray839.png]
MA:0000219
MESH:A.08.800.050
ncithesaurus:Autonomic_Nervous_System
NIF_GrossAnatomy:birnlex_1123
SCTID:362481007
TAO:0001574
VHOG:0000396

ZFA:0001574
Synonyms: "ANS" RELATED []
"divisio autonomica systematis nervosi peripherici" RELATED LATIN [Wikipedia:Autonomic_nervous_system]
"visceral nervous system" EXACT []
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_9905-MA_0000219-ZFA_0001574
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004121(ectoderm-derived structure),UBERON:0011216(organ system subdivision)



Children

is a:UBERON:0000013 (sympathetic nervous system),UBERON:0002005 (enteric nervous system)
part of:UBERON:0000011 (parasympathetic nervous system),UBERON:0000013 (sympathetic nervous system),UBERON:0001805 (autonomic ganglion),UBERON:0002005 (enteric nervous system)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002410 (autonomic nervous system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
7.76e-118FFCP PHASE1:Hg19::chr4:41884620..41884663,-#_7de9f8b6bb3b2048f5c4fb9bb7293cd2p1@ENST00000504870
7.76e-118FFCP PHASE2:Hg19::chr2:16082384..16082391,+#_7de9f8b6bb3b2048f5c4fb9bb7293cd2p9@MYCN
7.76e-118FFCP PHASE1:Hg19::chr4:41859832..41859854,+#_7de9f8b6bb3b2048f5c4fb9bb7293cd2p@chr4:41859832..41859854, +
7.76e-118FFCP PHASE2:Hg19::chr1:50569575..50569586,+#_7de9f8b6bb3b2048f5c4fb9bb7293cd2p11@ELAVL4
7.76e-118FFCP PHASE1:Hg19::chr11:71952309..71952319,-#_7de9f8b6bb3b2048f5c4fb9bb7293cd2p2@PHOX2A
7.76e-118FFCP PHASE2:Hg19::chr11:71952309..71952319,-#_7de9f8b6bb3b2048f5c4fb9bb7293cd2p2@PHOX2A
7.76e-118FFCP PHASE2:Hg19::chr2:16081024..16081034,+#_7de9f8b6bb3b2048f5c4fb9bb7293cd2p10@MYCN
7.76e-118FFCP PHASE1:Hg19::chr2:16082384..16082391,+#_7de9f8b6bb3b2048f5c4fb9bb7293cd2p9@MYCN
7.76e-118FFCP PHASE1:Hg19::chr1:50569575..50569586,+#_7de9f8b6bb3b2048f5c4fb9bb7293cd2p11@ELAVL4
7.76e-118FFCP PHASE2:Hg19::chr4:41884620..41884663,-#_7de9f8b6bb3b2048f5c4fb9bb7293cd2p1@ENST00000504870
7.76e-118FFCP PHASE2:Hg19::chr4:41859832..41859854,+#_7de9f8b6bb3b2048f5c4fb9bb7293cd2p@chr4:41859832..41859854, +
7.76e-118FFCP PHASE1:Hg19::chr2:16081024..16081034,+#_7de9f8b6bb3b2048f5c4fb9bb7293cd2p10@MYCN
5.18e-105FFCP PHASE1:Hg19::chr4:41750860..41750867,-#_6f5009937a4b5a8fceaea7ebd0376621p8@PHOX2B
5.18e-105FFCP PHASE2:Hg19::chr4:41750860..41750867,-#_6f5009937a4b5a8fceaea7ebd0376621p8@PHOX2B
6.77e-105FFCP PHASE2:Hg19::chr8:142878006..142878015,+#_eb42c68682a7318c06124e789a688c7cp@chr8:142878006..142878015, +
6.77e-105FFCP PHASE1:Hg19::chr8:142878006..142878015,+#_eb42c68682a7318c06124e789a688c7cp@chr8:142878006..142878015, +
6.64e-89FFCP PHASE1:Hg19::chr4:174440390..174440400,-#_9d483d40b79a0924263d3745898f19dep@chr4:174440390..174440400, -
6.64e-89FFCP PHASE2:Hg19::chr2:16082395..16082415,+#_9d483d40b79a0924263d3745898f19dep6@MYCN
6.64e-89FFCP PHASE1:Hg19::chr5:168271880..168271889,-#_9d483d40b79a0924263d3745898f19dep15@SLIT3
6.64e-89FFCP PHASE1:Hg19::chr2:74735290..74735299,-#_9d483d40b79a0924263d3745898f19dep11@PCGF1
6.64e-89FFCP PHASE2:Hg19::chr2:16082418..16082429,+#_9d483d40b79a0924263d3745898f19dep8@MYCN
6.64e-89FFCP PHASE2:Hg19::chr4:174440390..174440400,-#_9d483d40b79a0924263d3745898f19dep@chr4:174440390..174440400, -
6.64e-89FFCP PHASE1:Hg19::chr2:16082395..16082415,+#_9d483d40b79a0924263d3745898f19dep6@MYCN
6.64e-89FFCP PHASE2:Hg19::chr5:168271880..168271889,-#_9d483d40b79a0924263d3745898f19dep15@SLIT3
6.64e-89FFCP PHASE2:Hg19::chr2:74735290..74735299,-#_9d483d40b79a0924263d3745898f19dep11@PCGF1
6.64e-89FFCP PHASE1:Hg19::chr2:16082418..16082429,+#_9d483d40b79a0924263d3745898f19dep8@MYCN
8.98e-89FFCP PHASE1:Hg19::chr11:71952772..71952788,-#_d1bd1b406d5217e71c362022e71a00dep@chr11:71952772..71952788, -
8.98e-89FFCP PHASE2:Hg19::chr11:71952772..71952788,-#_d1bd1b406d5217e71c362022e71a00dep@chr11:71952772..71952788, -
8.98e-89FFCP PHASE1:Hg19::chr2:74735271..74735288,-#_d1bd1b406d5217e71c362022e71a00dep10@PCGF1
8.98e-89FFCP PHASE2:Hg19::chr2:74735271..74735288,-#_d1bd1b406d5217e71c362022e71a00dep10@PCGF1
1.21e-88FFCP PHASE1:Hg19::chr4:175257438..175257442,+#_99a268189da10d8ceb3dd404e38b5774p@chr4:175257438..175257442, +
1.21e-88FFCP PHASE2:Hg19::chr4:175257438..175257442,+#_99a268189da10d8ceb3dd404e38b5774p@chr4:175257438..175257442, +
1.31e-86FFCP PHASE1:Mm9::chr9:20777404..20777418,+#_6b2e269dd382efa9499a91aca82a43d0p@chr9:20777404..20777418, +
1.31e-86FFCP PHASE1:Mm9::chr11:113795301..113795315,+#_6b2e269dd382efa9499a91aca82a43d0p@chr11:113795301..113795315, +
1.31e-86FFCP PHASE2:Mm9::chr15:90848413..90848436,-#_6b2e269dd382efa9499a91aca82a43d0p@chr15:90848413..90848436, -
1.31e-86FFCP PHASE2:Mm9::chr7:98820891..98820900,+#_6b2e269dd382efa9499a91aca82a43d0p34@Dlg2
1.31e-86FFCP PHASE2:Mm9::chr11:113795301..113795315,+#_6b2e269dd382efa9499a91aca82a43d0p@chr11:113795301..113795315, +
1.31e-86FFCP PHASE1:Mm9::chr15:90848413..90848436,-#_6b2e269dd382efa9499a91aca82a43d0p@chr15:90848413..90848436, -
1.31e-86FFCP PHASE1:Mm9::chr7:98820891..98820900,+#_6b2e269dd382efa9499a91aca82a43d0p34@Dlg2
1.31e-86FFCP PHASE2:Mm9::chr9:20777404..20777418,+#_6b2e269dd382efa9499a91aca82a43d0p@chr9:20777404..20777418, +
2.12e-79FFCP PHASE2:Hg19::chr4:41750895..41750904,-#_3b79a08c61329cd5335a6bdb092380c0p6@PHOX2B
2.12e-79FFCP PHASE1:Hg19::chr4:41750895..41750904,-#_3b79a08c61329cd5335a6bdb092380c0p6@PHOX2B
3.49e-79FFCP PHASE2:Hg19::chr7:19185585..19185590,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr7:19185585..19185590, -
3.49e-79FFCP PHASE2:Hg19::chr4:174968748..174968753,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr4:174968748..174968753, +
3.49e-79FFCP PHASE1:Hg19::chr7:8302002..8302015,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p10@ICA1
3.49e-79FFCP PHASE1:Hg19::chr18:77044132..77044175,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr18:77044132..77044175, +
3.49e-79FFCP PHASE2:Hg19::chr2:29894082..29894092,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr2:29894082..29894092, -
3.49e-79FFCP PHASE1:Hg19::chr17:11389592..11389599,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr17:11389592..11389599, -
3.49e-79FFCP PHASE1:Hg19::chr7:19185493..19185503,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p2@FERD3L
3.49e-79FFCP PHASE1:Hg19::chr4:174954376..174954399,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr4:174954376..174954399, -
3.49e-79FFCP PHASE1:Hg19::chr2:29728669..29728672,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr2:29728669..29728672, -
3.49e-79FFCP PHASE2:Hg19::chr13:37494987..37494992,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p23@SMAD9
3.49e-79FFCP PHASE2:Hg19::chr7:19185044..19185056,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr7:19185044..19185056, +
3.49e-79FFCP PHASE2:Hg19::chr4:174930547..174930558,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr4:174930547..174930558, -
3.49e-79FFCP PHASE1:Hg19::chr7:8276855..8276873,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr7:8276855..8276873, +
3.49e-79FFCP PHASE2:Hg19::chr12:85380546..85380557,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr12:85380546..85380557, +
3.49e-79FFCP PHASE2:Hg19::chr17:74540293..74540300,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p15@PRCD
3.49e-79FFCP PHASE1:Hg19::chr4:175041762..175041777,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p2@ENST00000503140
3.49e-79FFCP PHASE2:Hg19::chr1:22696471..22696505,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr1:22696471..22696505, -
3.49e-79FFCP PHASE1:Hg19::chr2:29747945..29747955,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr2:29747945..29747955, -
3.49e-79FFCP PHASE1:Hg19::chr4:174930472..174930480,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr4:174930472..174930480, -
3.49e-79FFCP PHASE1:Hg19::chr11:71955016..71955024,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p7@PHOX2A
3.49e-79FFCP PHASE1:Hg19::chr5:16180927..16180934,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p7@MARCH11
3.49e-79FFCP PHASE2:Hg19::chr4:41875797..41875802,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr4:41875797..41875802, -
3.49e-79FFCP PHASE1:Hg19::chr13:36045103..36045110,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr13:36045103..36045110, +
3.49e-79FFCP PHASE1:Hg19::chr2:16082933..16082942,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr2:16082933..16082942, +
3.49e-79FFCP PHASE2:Hg19::chr5:168310338..168310348,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr5:168310338..168310348, -
3.49e-79FFCP PHASE1:Hg19::chr7:19185559..19185569,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr7:19185559..19185569, -
3.49e-79FFCP PHASE1:Hg19::chr13:37494987..37494992,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p23@SMAD9
3.49e-79FFCP PHASE2:Hg19::chr7:19185475..19185487,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p1@FERD3L
3.49e-79FFCP PHASE2:Hg19::chr11:71955016..71955024,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p7@PHOX2A
3.49e-79FFCP PHASE1:Hg19::chr2:29894082..29894092,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr2:29894082..29894092, -
3.49e-79FFCP PHASE1:Hg19::chr2:30142997..30143009,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr2:30142997..30143009, -
3.49e-79FFCP PHASE1:Hg19::chr18:56886837..56886844,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr18:56886837..56886844, +
3.49e-79FFCP PHASE2:Hg19::chr4:113870230..113870237,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr4:113870230..113870237, +
3.49e-79FFCP PHASE2:Hg19::chr18:77044132..77044175,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr18:77044132..77044175, +
3.49e-79FFCP PHASE1:Hg19::chr7:19184929..19184938,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p4@FERD3L
3.49e-79FFCP PHASE1:Hg19::chr4:174930493..174930503,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr4:174930493..174930503, -
3.49e-79FFCP PHASE2:Hg19::chr7:19186529..19186536,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr7:19186529..19186536, +
3.49e-79FFCP PHASE2:Hg19::chr4:175041125..175041137,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr4:175041125..175041137, -
3.49e-79FFCP PHASE1:Hg19::chr12:85380546..85380557,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr12:85380546..85380557, +
3.49e-79FFCP PHASE1:Hg19::chr7:19185585..19185590,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr7:19185585..19185590, -
3.49e-79FFCP PHASE1:Hg19::chr4:174968748..174968753,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr4:174968748..174968753, +
3.49e-79FFCP PHASE1:Hg19::chr1:22696471..22696505,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr1:22696471..22696505, -
3.49e-79FFCP PHASE2:Hg19::chr7:19185493..19185503,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p2@FERD3L
3.49e-79FFCP PHASE2:Hg19::chr4:174954376..174954399,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr4:174954376..174954399, -
3.49e-79FFCP PHASE1:Hg19::chr11:71952706..71952712,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p4@PHOX2A
3.49e-79FFCP PHASE1:Hg19::chr4:41875797..41875802,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr4:41875797..41875802, -
3.49e-79FFCP PHASE2:Hg19::chr7:8276508..8276551,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p14@ICA1
3.49e-79FFCP PHASE2:Hg19::chr17:11389592..11389599,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr17:11389592..11389599, -
3.49e-79FFCP PHASE1:Hg19::chr7:19185044..19185056,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr7:19185044..19185056, +
3.49e-79FFCP PHASE1:Hg19::chr4:174930547..174930558,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr4:174930547..174930558, -
3.49e-79FFCP PHASE2:Hg19::chr4:175041762..175041777,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p2@ENST00000503140
3.49e-79FFCP PHASE2:Hg19::chr7:8302002..8302015,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p10@ICA1
3.49e-79FFCP PHASE2:Hg19::chr4:174930472..174930480,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr4:174930472..174930480, -
3.49e-79FFCP PHASE2:Hg19::chr11:71952706..71952712,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p4@PHOX2A
3.49e-79FFCP PHASE2:Hg19::chr5:16180927..16180934,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p7@MARCH11
3.49e-79FFCP PHASE2:Hg19::chr2:29728669..29728672,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr2:29728669..29728672, -
3.49e-79FFCP PHASE1:Hg19::chr5:168310338..168310348,-#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr5:168310338..168310348, -
3.49e-79FFCP PHASE2:Hg19::chr2:16082933..16082942,+#_2b3ee90e5aa590e2edc7823c5bac8eb6p@chr2:16082933..16082942, +










Property "Property value" (as page type) with input value "UBPROP:0000001 "Part of the peripheral nervous system which regulates involuntary functions of the body and consists of the sympathetic and parasympathetic system.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.