UBERON:0004830: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} |
Revision as of 17:05, 26 June 2012
Name: | respiratory system skeletal muscle | ||
---|---|---|---|
Definition: | "A portion of skeletal muscle tissue that is part of a respiratory system [Obol]." [OBOL:automatic] | ||
Xrefs: |
| ||
Synonyms: |
"respiratory system skeletal muscle tissue" EXACT [OBOL:automatic] "skeletal muscle of apparatus respiratorius" EXACT [OBOL:automatic] "skeletal muscle of respiratory system" EXACT [OBOL:automatic] "skeletal muscle tissue of apparatus respiratorius" EXACT [OBOL:automatic] "skeletal muscle tissue of respiratory system" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0001134(skeletal muscle tissue) |
---|
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10069-101I6 (diaphragm, fetal, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004830 (respiratory system skeletal muscle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
5.42e-195 | FFCP PHASE1:Hg19::chr18:10458574..10458579,-#_364bc01ab7c7231c909360187fa59253 | p@chr18:10458574..10458579, - |
5.42e-195 | FFCP PHASE2:Hg19::chr18:10458574..10458579,-#_364bc01ab7c7231c909360187fa59253 | p@chr18:10458574..10458579, - |
2.55e-98 | FFCP PHASE1:Hg19::chr1:223065647..223065654,+#_c7793277a78f646628342c80dceb1080 | p@chr1:223065647..223065654, + |
2.55e-98 | FFCP PHASE1:Hg19::chr17:39306068..39306077,-#_c7793277a78f646628342c80dceb1080 | p1@KRTAP4-5 |
2.55e-98 | FFCP PHASE1:Hg19::chr11:64518023..64518030,-#_c7793277a78f646628342c80dceb1080 | p19@PYGM |
2.55e-98 | FFCP PHASE2:Hg19::chr9:101832711..101832718,+#_c7793277a78f646628342c80dceb1080 | p@chr9:101832711..101832718, + |
2.55e-98 | FFCP PHASE1:Hg19::chr9:101832711..101832718,+#_c7793277a78f646628342c80dceb1080 | p@chr9:101832711..101832718, + |
2.55e-98 | FFCP PHASE2:Hg19::chr17:39388700..39388702,+#_c7793277a78f646628342c80dceb1080 | p1@KRTAP9-3, p1@KRTAP9-9 |
2.55e-98 | FFCP PHASE1:Hg19::chr20:31571662..31571664,+#_c7793277a78f646628342c80dceb1080 | p@chr20:31571662..31571664, + |
2.55e-98 | FFCP PHASE1:Hg19::chr1:223065664..223065673,+#_c7793277a78f646628342c80dceb1080 | p@chr1:223065664..223065673, + |
2.55e-98 | FFCP PHASE1:Hg19::chr17:39324471..39324474,-#_c7793277a78f646628342c80dceb1080 | p1@KRTAP4-3 |
2.55e-98 | FFCP PHASE1:Hg19::chr3:112929906..112929910,+#_c7793277a78f646628342c80dceb1080 | p13@BOC |
2.55e-98 | FFCP PHASE2:Hg19::chr17:39394250..39394253,+#_c7793277a78f646628342c80dceb1080 | p1@KRTAP9-8 |
2.55e-98 | FFCP PHASE1:Hg19::chr17:39334471..39334474,-#_c7793277a78f646628342c80dceb1080 | p1@KRTAP4-2 |
2.55e-98 | FFCP PHASE2:Hg19::chr17:10428881..10428898,+#_c7793277a78f646628342c80dceb1080 | p@chr17:10428881..10428898, + |
2.55e-98 | FFCP PHASE2:Hg19::chr1:223065647..223065654,+#_c7793277a78f646628342c80dceb1080 | p@chr1:223065647..223065654, + |
2.55e-98 | FFCP PHASE2:Hg19::chr17:39306068..39306077,-#_c7793277a78f646628342c80dceb1080 | p1@KRTAP4-5 |
2.55e-98 | FFCP PHASE2:Hg19::chr11:64518023..64518030,-#_c7793277a78f646628342c80dceb1080 | p19@PYGM |
2.55e-98 | FFCP PHASE1:Hg19::chr17:39388700..39388702,+#_c7793277a78f646628342c80dceb1080 | p1@KRTAP9-3, p1@KRTAP9-9 |
2.55e-98 | FFCP PHASE2:Hg19::chr20:31571662..31571664,+#_c7793277a78f646628342c80dceb1080 | p@chr20:31571662..31571664, + |
2.55e-98 | FFCP PHASE2:Hg19::chr1:223065664..223065673,+#_c7793277a78f646628342c80dceb1080 | p@chr1:223065664..223065673, + |
2.55e-98 | FFCP PHASE1:Hg19::chr8:115584851..115584862,+#_c7793277a78f646628342c80dceb1080 | p@chr8:115584851..115584862, + |
2.55e-98 | FFCP PHASE2:Hg19::chr17:39324471..39324474,-#_c7793277a78f646628342c80dceb1080 | p1@KRTAP4-3 |
2.55e-98 | FFCP PHASE2:Hg19::chr3:112929906..112929910,+#_c7793277a78f646628342c80dceb1080 | p13@BOC |
2.55e-98 | FFCP PHASE2:Hg19::chr8:115584851..115584862,+#_c7793277a78f646628342c80dceb1080 | p@chr8:115584851..115584862, + |
2.55e-98 | FFCP PHASE1:Hg19::chr17:39394250..39394253,+#_c7793277a78f646628342c80dceb1080 | p1@KRTAP9-8 |
2.55e-98 | FFCP PHASE1:Hg19::chr17:10428881..10428898,+#_c7793277a78f646628342c80dceb1080 | p@chr17:10428881..10428898, + |
2.55e-98 | FFCP PHASE2:Hg19::chr17:39334471..39334474,-#_c7793277a78f646628342c80dceb1080 | p1@KRTAP4-2 |
1.23e-66 | FFCP PHASE2:Hg19::chr19:50994855..50994864,-#_2294b53be88cf94202f16581d688638c | p@chr19:50994855..50994864, - |
1.23e-66 | FFCP PHASE2:Hg19::chr10:75226166..75226169,-#_2294b53be88cf94202f16581d688638c | p6@PPP3CB |
1.23e-66 | FFCP PHASE1:Hg19::chr11:126077478..126077485,-#_2294b53be88cf94202f16581d688638c | p4@RPUSD4 |
1.23e-66 | FFCP PHASE2:Hg19::chr12:102075405..102075407,+#_2294b53be88cf94202f16581d688638c | p@chr12:102075405..102075407, + |
1.23e-66 | FFCP PHASE1:Hg19::chr10:75226166..75226169,-#_2294b53be88cf94202f16581d688638c | p6@PPP3CB |
1.23e-66 | FFCP PHASE1:Hg19::chr12:102075405..102075407,+#_2294b53be88cf94202f16581d688638c | p@chr12:102075405..102075407, + |
1.23e-66 | FFCP PHASE1:Hg19::chr19:50994855..50994864,-#_2294b53be88cf94202f16581d688638c | p@chr19:50994855..50994864, - |
1.23e-66 | FFCP PHASE2:Hg19::chr11:126077478..126077485,-#_2294b53be88cf94202f16581d688638c | p4@RPUSD4 |
2.39e-66 | FFCP PHASE2:Hg19::chr10:99343436..99343448,+#_1e152a91edf651c746838e28acd89cb0 | p@chr10:99343436..99343448, + |
2.39e-66 | FFCP PHASE2:Hg19::chr19:50997736..50997745,-#_1e152a91edf651c746838e28acd89cb0 | p@chr19:50997736..50997745, - |
2.39e-66 | FFCP PHASE1:Hg19::chr2:179588230..179588237,-#_1e152a91edf651c746838e28acd89cb0 | p@chr2:179588230..179588237, - |
2.39e-66 | FFCP PHASE2:Hg19::chr10:24407264..24407270,-#_1e152a91edf651c746838e28acd89cb0 | p@chr10:24407264..24407270, - |
2.39e-66 | FFCP PHASE2:Hg19::chr11:1955193..1955200,+#_1e152a91edf651c746838e28acd89cb0 | p23@TNNT3 |
2.39e-66 | FFCP PHASE1:Hg19::chr2:179548750..179548755,-#_1e152a91edf651c746838e28acd89cb0 | p@chr2:179548750..179548755, - |
2.39e-66 | FFCP PHASE2:Hg19::chr2:26700872..26700884,-#_1e152a91edf651c746838e28acd89cb0 | p5@OTOF |
2.39e-66 | FFCP PHASE2:Hg19::chr17:10533450..10533457,+#_1e152a91edf651c746838e28acd89cb0 | p@chr17:10533450..10533457, + |
2.39e-66 | FFCP PHASE1:Hg19::chr2:179542420..179542428,-#_1e152a91edf651c746838e28acd89cb0 | p@chr2:179542420..179542428, - |
2.39e-66 | FFCP PHASE1:Hg19::chr5:7727283..7727284,+#_1e152a91edf651c746838e28acd89cb0 | p19@ADCY2 |
2.39e-66 | FFCP PHASE2:Hg19::chr15:99548796..99548805,-#_1e152a91edf651c746838e28acd89cb0 | p3@PGPEP1L |
2.39e-66 | FFCP PHASE2:Hg19::chr12:68185216..68185218,+#_1e152a91edf651c746838e28acd89cb0 | p@chr12:68185216..68185218, + |
2.39e-66 | FFCP PHASE2:Hg19::chr2:179588230..179588237,-#_1e152a91edf651c746838e28acd89cb0 | p@chr2:179588230..179588237, - |
2.39e-66 | FFCP PHASE1:Hg19::chr15:99548796..99548805,-#_1e152a91edf651c746838e28acd89cb0 | p3@PGPEP1L |
2.39e-66 | FFCP PHASE1:Hg19::chr4:26165179..26165190,+#_1e152a91edf651c746838e28acd89cb0 | p47@RBPJ |
2.39e-66 | FFCP PHASE1:Hg19::chr19:50997736..50997745,-#_1e152a91edf651c746838e28acd89cb0 | p@chr19:50997736..50997745, - |
2.39e-66 | FFCP PHASE1:Hg19::chr12:68185216..68185218,+#_1e152a91edf651c746838e28acd89cb0 | p@chr12:68185216..68185218, + |
2.39e-66 | FFCP PHASE1:Hg19::chr10:99343436..99343448,+#_1e152a91edf651c746838e28acd89cb0 | p@chr10:99343436..99343448, + |
2.39e-66 | FFCP PHASE1:Hg19::chr10:24407264..24407270,-#_1e152a91edf651c746838e28acd89cb0 | p@chr10:24407264..24407270, - |
2.39e-66 | FFCP PHASE2:Hg19::chr7:123241760..123241766,-#_1e152a91edf651c746838e28acd89cb0 | p@chr7:123241760..123241766, - |
2.39e-66 | FFCP PHASE1:Hg19::chr7:123241760..123241766,-#_1e152a91edf651c746838e28acd89cb0 | p@chr7:123241760..123241766, - |
2.39e-66 | FFCP PHASE2:Hg19::chr2:179548750..179548755,-#_1e152a91edf651c746838e28acd89cb0 | p@chr2:179548750..179548755, - |
2.39e-66 | FFCP PHASE1:Hg19::chr11:1955193..1955200,+#_1e152a91edf651c746838e28acd89cb0 | p23@TNNT3 |
2.39e-66 | FFCP PHASE1:Hg19::chr2:26700872..26700884,-#_1e152a91edf651c746838e28acd89cb0 | p5@OTOF |
2.39e-66 | FFCP PHASE2:Hg19::chr14:97684658..97684662,+#_1e152a91edf651c746838e28acd89cb0 | p@chr14:97684658..97684662, + |
2.39e-66 | FFCP PHASE1:Hg19::chr17:10533450..10533457,+#_1e152a91edf651c746838e28acd89cb0 | p@chr17:10533450..10533457, + |
2.39e-66 | FFCP PHASE2:Hg19::chr4:26165179..26165190,+#_1e152a91edf651c746838e28acd89cb0 | p47@RBPJ |
2.39e-66 | FFCP PHASE2:Hg19::chr2:179542420..179542428,-#_1e152a91edf651c746838e28acd89cb0 | p@chr2:179542420..179542428, - |
2.39e-66 | FFCP PHASE2:Hg19::chr5:7727283..7727284,+#_1e152a91edf651c746838e28acd89cb0 | p19@ADCY2 |
2.39e-66 | FFCP PHASE1:Hg19::chr14:97684658..97684662,+#_1e152a91edf651c746838e28acd89cb0 | p@chr14:97684658..97684662, + |
4.66e-66 | FFCP PHASE2:Hg19::chr17:38938796..38938803,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p1@KRT27 |
4.66e-66 | FFCP PHASE1:Hg19::chr2:152393686..152393693,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p@chr2:152393686..152393693, - |
4.66e-66 | FFCP PHASE2:Hg19::chr2:152419209..152419216,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p@chr2:152419209..152419216, - |
4.66e-66 | FFCP PHASE1:Hg19::chr2:152476098..152476105,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p@chr2:152476098..152476105, - |
4.66e-66 | FFCP PHASE1:Hg19::chr17:39507076..39507080,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p1@KRT33A |
4.66e-66 | FFCP PHASE2:Hg19::chr2:168106984..168106993,+#_e0f2d7c13f691a65763ea4a8ce813ffc | p34@XIRP2 |
4.66e-66 | FFCP PHASE2:Hg19::chr2:168105377..168105386,+#_e0f2d7c13f691a65763ea4a8ce813ffc | p28@XIRP2 |
4.66e-66 | FFCP PHASE2:Hg19::chr2:152342364..152342373,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p@chr2:152342364..152342373, - |
4.66e-66 | FFCP PHASE1:Hg19::chr2:152514527..152514536,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p@chr2:152514527..152514536, - |
4.66e-66 | FFCP PHASE2:Hg19::chr12:52695617..52695623,+#_e0f2d7c13f691a65763ea4a8ce813ffc | p4@KRT86 |
4.66e-66 | FFCP PHASE1:Hg19::chr12:52695617..52695623,+#_e0f2d7c13f691a65763ea4a8ce813ffc | p4@KRT86 |
4.66e-66 | FFCP PHASE1:Hg19::chr17:38911580..38911584,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p1@KRT25 |
4.66e-66 | FFCP PHASE2:Hg19::chr13:28961100..28961122,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p14@FLT1 |
4.66e-66 | FFCP PHASE1:Hg19::chr13:28961100..28961122,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p14@FLT1 |
4.66e-66 | FFCP PHASE2:Hg19::chr17:10544511..10544520,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p@chr17:10544511..10544520, - |
4.66e-66 | FFCP PHASE1:Hg19::chr17:38938796..38938803,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p1@KRT27 |
4.66e-66 | FFCP PHASE2:Hg19::chr8:82373809..82373815,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p1@FABP9 |
4.66e-66 | FFCP PHASE1:Hg19::chr8:82373809..82373815,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p1@FABP9 |
4.66e-66 | FFCP PHASE1:Hg19::chr2:152419209..152419216,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p@chr2:152419209..152419216, - |
4.66e-66 | FFCP PHASE2:Hg19::chr2:152393686..152393693,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p@chr2:152393686..152393693, - |
4.66e-66 | FFCP PHASE2:Hg19::chr2:152476098..152476105,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p@chr2:152476098..152476105, - |
4.66e-66 | FFCP PHASE1:Hg19::chr2:168106984..168106993,+#_e0f2d7c13f691a65763ea4a8ce813ffc | p34@XIRP2 |
4.66e-66 | FFCP PHASE2:Hg19::chr17:39507076..39507080,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p1@KRT33A |
4.66e-66 | FFCP PHASE1:Hg19::chr2:168105377..168105386,+#_e0f2d7c13f691a65763ea4a8ce813ffc | p28@XIRP2 |
4.66e-66 | FFCP PHASE2:Hg19::chr2:152514527..152514536,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p@chr2:152514527..152514536, - |
4.66e-66 | FFCP PHASE1:Hg19::chr2:152342364..152342373,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p@chr2:152342364..152342373, - |
4.66e-66 | FFCP PHASE2:Hg19::chr17:38911580..38911584,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p1@KRT25 |
4.66e-66 | FFCP PHASE1:Hg19::chr17:10544511..10544520,-#_e0f2d7c13f691a65763ea4a8ce813ffc | p@chr17:10544511..10544520, - |
1.46e-50 | FFCP PHASE2:Hg19::chr10:35104131..35104138,-#_26ac9eb858bd7b8ddc0ba5971d52c146 | p4@PARD3 |
1.46e-50 | FFCP PHASE2:Hg19::chr1:236861252..236861256,+#_26ac9eb858bd7b8ddc0ba5971d52c146 | p@chr1:236861252..236861256, + |
1.46e-50 | FFCP PHASE2:Hg19::chr2:152520289..152520294,-#_26ac9eb858bd7b8ddc0ba5971d52c146 | p@chr2:152520289..152520294, - |
1.46e-50 | FFCP PHASE1:Hg19::chr22:32647133..32647135,-#_26ac9eb858bd7b8ddc0ba5971d52c146 | p@chr22:32647133..32647135, - |
1.46e-50 | FFCP PHASE2:Hg19::chr11:94476841..94476846,+#_26ac9eb858bd7b8ddc0ba5971d52c146 | p@chr11:94476841..94476846, + |
1.46e-50 | FFCP PHASE1:Hg19::chrX:21672387..21672391,-#_26ac9eb858bd7b8ddc0ba5971d52c146 | p@chrX:21672387..21672391, - |