UBERON:0005889: Difference between revisions
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Latest revision as of 17:06, 26 June 2012
| Name: | zygote cortex | ||
|---|---|---|---|
| Xrefs: |
| ||
| Synonyms: | "cortex" RELATED [XAO:0000216] | ||
| Comments: | todo - request from GO |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000470(cell part) |
|---|
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 1392-42F2 (cortex, neonate N30)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005889 (zygote cortex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.47e-44 | FFCP PHASE1:Mm9::chr13:42799452..42799454,+#_10a591a474c94dafd3184b0b9720581f | p@chr13:42799452..42799454, + |
| 7.47e-44 | FFCP PHASE1:Mm9::chr2:121125219..121125237,+#_10a591a474c94dafd3184b0b9720581f | p@chr2:121125219..121125237, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chr2:121125219..121125237,+#_10a591a474c94dafd3184b0b9720581f | p@chr2:121125219..121125237, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chr13:42799452..42799454,+#_10a591a474c94dafd3184b0b9720581f | p@chr13:42799452..42799454, + |
| 5.62e-30 | FFCP PHASE2:Mm9::chr3:67868320..67868329,+#_b9d0d35fa69f53f278aeac80025953a1 | p16@Schip1 |
| 5.62e-30 | FFCP PHASE1:Mm9::chr3:67868320..67868329,+#_b9d0d35fa69f53f278aeac80025953a1 | p16@Schip1 |
| 1.1e-29 | FFCP PHASE2:Mm9::chr14:66589447..66589458,+#_f58b764448e84a993ba36f108fe6729d | p15@Clu |
| 1.1e-29 | FFCP PHASE1:Mm9::chr14:66589447..66589458,+#_f58b764448e84a993ba36f108fe6729d | p15@Clu |
| 1.1e-29 | FFCP PHASE1:Mm9::chr11:68904990..68905000,+#_f58b764448e84a993ba36f108fe6729d | p@chr11:68904990..68905000, + |
| 1.1e-29 | FFCP PHASE1:Mm9::chr5:14677450..14677452,+#_f58b764448e84a993ba36f108fe6729d | p@chr5:14677450..14677452, + |
| 1.1e-29 | FFCP PHASE1:Mm9::chr10:74787727..74787734,+#_f58b764448e84a993ba36f108fe6729d | p@chr10:74787727..74787734, + |
| 1.1e-29 | FFCP PHASE1:Mm9::chr19:4711358..4711361,+#_f58b764448e84a993ba36f108fe6729d | p19@Spnb3 |
| 1.1e-29 | FFCP PHASE2:Mm9::chr11:68904990..68905000,+#_f58b764448e84a993ba36f108fe6729d | p@chr11:68904990..68905000, + |
| 1.1e-29 | FFCP PHASE2:Mm9::chr10:74787727..74787734,+#_f58b764448e84a993ba36f108fe6729d | p@chr10:74787727..74787734, + |
| 1.1e-29 | FFCP PHASE2:Mm9::chr5:14677450..14677452,+#_f58b764448e84a993ba36f108fe6729d | p@chr5:14677450..14677452, + |
| 1.1e-29 | FFCP PHASE2:Mm9::chr19:4711358..4711361,+#_f58b764448e84a993ba36f108fe6729d | p19@Spnb3 |
| 5.07e-23 | FFCP PHASE2:Mm9::chr19:8742249..8742252,+#_37d836e5f7c929d4967277c41e65d583 | p@chr19:8742249..8742252, + |
| 5.07e-23 | FFCP PHASE1:Mm9::chr19:8742249..8742252,+#_37d836e5f7c929d4967277c41e65d583 | p@chr19:8742249..8742252, + |
| 8.39e-23 | FFCP PHASE2:Mm9::chr9:44946379..44946388,+#_41a6b54089b9ce6e5f0918b70a0d6a96 | p20@Scn4b |
| 8.39e-23 | FFCP PHASE1:Mm9::chr10:74787713..74787724,+#_41a6b54089b9ce6e5f0918b70a0d6a96 | p@chr10:74787713..74787724, + |
| 8.39e-23 | FFCP PHASE1:Mm9::chr9:44946379..44946388,+#_41a6b54089b9ce6e5f0918b70a0d6a96 | p20@Scn4b |
| 8.39e-23 | FFCP PHASE2:Mm9::chr10:74787713..74787724,+#_41a6b54089b9ce6e5f0918b70a0d6a96 | p@chr10:74787713..74787724, + |
| 8.39e-23 | FFCP PHASE2:Mm9::chr9:37363230..37363241,+#_41a6b54089b9ce6e5f0918b70a0d6a96 | p@chr9:37363230..37363241, + |
| 8.39e-23 | FFCP PHASE1:Mm9::chr9:37363230..37363241,+#_41a6b54089b9ce6e5f0918b70a0d6a96 | p@chr9:37363230..37363241, + |
| 1.39e-22 | FFCP PHASE2:Mm9::chr2:110680212..110680219,-#_61b2445740b6f0eec0721c7e02acd727 | p@chr2:110680212..110680219, - |
| 1.39e-22 | FFCP PHASE1:Mm9::chr2:110680212..110680219,-#_61b2445740b6f0eec0721c7e02acd727 | p@chr2:110680212..110680219, - |
| 1.39e-22 | FFCP PHASE1:Mm9::chr16:74731624..74731626,-#_61b2445740b6f0eec0721c7e02acd727 | p@chr16:74731624..74731626, - |
| 1.39e-22 | FFCP PHASE2:Mm9::chr10:109217136..109217139,-#_61b2445740b6f0eec0721c7e02acd727 | p@chr10:109217136..109217139, - |
| 1.39e-22 | FFCP PHASE1:Mm9::chr10:80924310..80924312,+#_61b2445740b6f0eec0721c7e02acd727 | p1@ENSMUST00000156926 |
| 1.39e-22 | FFCP PHASE1:Mm9::chr6:118034145..118034150,+#_61b2445740b6f0eec0721c7e02acd727 | p@chr6:118034145..118034150, + |
| 1.39e-22 | FFCP PHASE1:Mm9::chr7:54346781..54346788,-#_61b2445740b6f0eec0721c7e02acd727 | p15@Ptpn5 |
| 1.39e-22 | FFCP PHASE2:Mm9::chr6:6813769..6813781,+#_61b2445740b6f0eec0721c7e02acd727 | p8@Dlx6 |
| 1.39e-22 | FFCP PHASE1:Mm9::chr8:126893799..126893818,-#_61b2445740b6f0eec0721c7e02acd727 | p@chr8:126893799..126893818, - |
| 1.39e-22 | FFCP PHASE2:Mm9::chr7:54346781..54346788,-#_61b2445740b6f0eec0721c7e02acd727 | p15@Ptpn5 |
| 1.39e-22 | FFCP PHASE1:Mm9::chr6:6813769..6813781,+#_61b2445740b6f0eec0721c7e02acd727 | p8@Dlx6 |
| 1.39e-22 | FFCP PHASE1:Mm9::chr18:85241159..85241166,+#_61b2445740b6f0eec0721c7e02acd727 | p@chr18:85241159..85241166, + |
| 1.39e-22 | FFCP PHASE2:Mm9::chr6:118034145..118034150,+#_61b2445740b6f0eec0721c7e02acd727 | p@chr6:118034145..118034150, + |
| 1.39e-22 | FFCP PHASE2:Mm9::chr10:80924310..80924312,+#_61b2445740b6f0eec0721c7e02acd727 | p1@ENSMUST00000156926 |
| 1.39e-22 | FFCP PHASE2:Mm9::chr18:85241159..85241166,+#_61b2445740b6f0eec0721c7e02acd727 | p@chr18:85241159..85241166, + |
| 1.39e-22 | FFCP PHASE2:Mm9::chr16:74731624..74731626,-#_61b2445740b6f0eec0721c7e02acd727 | p@chr16:74731624..74731626, - |
| 1.39e-22 | FFCP PHASE1:Mm9::chr10:109217136..109217139,-#_61b2445740b6f0eec0721c7e02acd727 | p@chr10:109217136..109217139, - |
| 1.39e-22 | FFCP PHASE2:Mm9::chr8:126893799..126893818,-#_61b2445740b6f0eec0721c7e02acd727 | p@chr8:126893799..126893818, - |
| 7.74e-19 | FFCP PHASE1:Mm9::chr4:77502680..77502686,-#_f5d20550e20b9c20b56b6ea6be5653ea | p@chr4:77502680..77502686, - |
| 7.74e-19 | FFCP PHASE2:Mm9::chr7:134162080..134162091,-#_f5d20550e20b9c20b56b6ea6be5653ea | p@chr7:134162080..134162091, - |
| 7.74e-19 | FFCP PHASE1:Mm9::chr7:134162080..134162091,-#_f5d20550e20b9c20b56b6ea6be5653ea | p@chr7:134162080..134162091, - |
| 7.74e-19 | FFCP PHASE2:Mm9::chr4:77502680..77502686,-#_f5d20550e20b9c20b56b6ea6be5653ea | p@chr4:77502680..77502686, - |
| 1.16e-18 | FFCP PHASE1:Mm9::chr9:37352646..37352651,+#_e14548a0ef83ab66ad96670f42cf407c | p@chr9:37352646..37352651, + |
| 1.16e-18 | FFCP PHASE1:Mm9::chr12:83440768..83440777,+#_e14548a0ef83ab66ad96670f42cf407c | p@chr12:83440768..83440777, + |
| 1.16e-18 | FFCP PHASE1:Mm9::chr5:23606513..23606516,+#_e14548a0ef83ab66ad96670f42cf407c | p3@Klhl7 |
| 1.16e-18 | FFCP PHASE2:Mm9::chr11:98209780..98209787,+#_e14548a0ef83ab66ad96670f42cf407c | p11@Ppp1r1b |
| 1.16e-18 | FFCP PHASE1:Mm9::chr11:98209780..98209787,+#_e14548a0ef83ab66ad96670f42cf407c | p11@Ppp1r1b |
| 1.16e-18 | FFCP PHASE1:Mm9::chr4:77100080..77100088,-#_e14548a0ef83ab66ad96670f42cf407c | p@chr4:77100080..77100088, - |
| 1.16e-18 | FFCP PHASE2:Mm9::chr12:83440768..83440777,+#_e14548a0ef83ab66ad96670f42cf407c | p@chr12:83440768..83440777, + |
| 1.16e-18 | FFCP PHASE2:Mm9::chr5:23606513..23606516,+#_e14548a0ef83ab66ad96670f42cf407c | p3@Klhl7 |
| 1.16e-18 | FFCP PHASE2:Mm9::chr4:77100080..77100088,-#_e14548a0ef83ab66ad96670f42cf407c | p@chr4:77100080..77100088, - |
| 1.16e-18 | FFCP PHASE2:Mm9::chr9:37352646..37352651,+#_e14548a0ef83ab66ad96670f42cf407c | p@chr9:37352646..37352651, + |
| 1.74e-18 | FFCP PHASE1:Mm9::chr13:96682542..96682565,-#_4a2f5823ae5f4ac089f308ce36510613 | p@chr13:96682542..96682565, - |
| 1.74e-18 | FFCP PHASE2:Mm9::chr11:6505664..6505673,-#_4a2f5823ae5f4ac089f308ce36510613 | p@chr11:6505664..6505673, - |
| 1.74e-18 | FFCP PHASE2:Mm9::chr13:96682542..96682565,-#_4a2f5823ae5f4ac089f308ce36510613 | p@chr13:96682542..96682565, - |
| 1.74e-18 | FFCP PHASE1:Mm9::chr11:6505664..6505673,-#_4a2f5823ae5f4ac089f308ce36510613 | p@chr11:6505664..6505673, - |
| 2.59e-18 | FFCP PHASE2:Mm9::chr1:126584616..126584620,-#_2837202578f1233a13032baab44021ec | p@chr1:126584616..126584620, - |
| 2.59e-18 | FFCP PHASE1:Mm9::chr10:101542314..101542317,+#_2837202578f1233a13032baab44021ec | p@chr10:101542314..101542317, + |
| 2.59e-18 | FFCP PHASE1:Mm9::chr18:60659073..60659084,-#_2837202578f1233a13032baab44021ec | p@chr18:60659073..60659084, - |
| 2.59e-18 | FFCP PHASE1:Mm9::chr8:86862710..86862727,+#_2837202578f1233a13032baab44021ec | p@chr8:86862710..86862727, + |
| 2.59e-18 | FFCP PHASE1:Mm9::chr1:126584616..126584620,-#_2837202578f1233a13032baab44021ec | p@chr1:126584616..126584620, - |
| 2.59e-18 | FFCP PHASE2:Mm9::chr1:39672532..39672535,-#_2837202578f1233a13032baab44021ec | p@chr1:39672532..39672535, - |
| 2.59e-18 | FFCP PHASE2:Mm9::chr2:28085622..28085634,+#_2837202578f1233a13032baab44021ec | p@chr2:28085622..28085634, + |
| 2.59e-18 | FFCP PHASE2:Mm9::chr8:86862710..86862727,+#_2837202578f1233a13032baab44021ec | p@chr8:86862710..86862727, + |
| 2.59e-18 | FFCP PHASE1:Mm9::chr1:39672532..39672535,-#_2837202578f1233a13032baab44021ec | p@chr1:39672532..39672535, - |
| 2.59e-18 | FFCP PHASE2:Mm9::chr18:60659073..60659084,-#_2837202578f1233a13032baab44021ec | p@chr18:60659073..60659084, - |
| 2.59e-18 | FFCP PHASE1:Mm9::chr2:28085622..28085634,+#_2837202578f1233a13032baab44021ec | p@chr2:28085622..28085634, + |
| 2.59e-18 | FFCP PHASE2:Mm9::chr10:101542314..101542317,+#_2837202578f1233a13032baab44021ec | p@chr10:101542314..101542317, + |
| 4.83e-16 | FFCP PHASE2:Mm9::chr5:24565435..24565445,-#_8cc455f0ffa6d44968c647c2fb8b45fb | p@chr5:24565435..24565445, - |
| 4.83e-16 | FFCP PHASE1:Mm9::chr5:24565435..24565445,-#_8cc455f0ffa6d44968c647c2fb8b45fb | p@chr5:24565435..24565445, - |
| 6.79e-16 | FFCP PHASE2:Mm9::chr11:98209742..98209748,+#_3f166764e0640d32ccedc32d204d4655 | p12@Ppp1r1b |
| 6.79e-16 | FFCP PHASE2:Mm9::chr5:99792484..99792489,-#_3f166764e0640d32ccedc32d204d4655 | p@chr5:99792484..99792489, - |
| 6.79e-16 | FFCP PHASE1:Mm9::chr5:99792484..99792489,-#_3f166764e0640d32ccedc32d204d4655 | p@chr5:99792484..99792489, - |
| 6.79e-16 | FFCP PHASE1:Mm9::chr11:98209742..98209748,+#_3f166764e0640d32ccedc32d204d4655 | p12@Ppp1r1b |
| 9.51e-16 | FFCP PHASE1:Mm9::chr6:77242229..77242230,-#_d289c71326fe32940a60cef02859dd36 | p@chr6:77242229..77242230, - |
| 9.51e-16 | FFCP PHASE1:Mm9::chr7:64845935..64845942,+#_d289c71326fe32940a60cef02859dd36 | p8@Gabrb3 |
| 9.51e-16 | FFCP PHASE2:Mm9::chr6:77242229..77242230,-#_d289c71326fe32940a60cef02859dd36 | p@chr6:77242229..77242230, - |
| 9.51e-16 | FFCP PHASE2:Mm9::chr10:74787686..74787708,+#_d289c71326fe32940a60cef02859dd36 | p@chr10:74787686..74787708, + |
| 9.51e-16 | FFCP PHASE2:Mm9::chr7:64845935..64845942,+#_d289c71326fe32940a60cef02859dd36 | p8@Gabrb3 |
| 9.51e-16 | FFCP PHASE2:Mm9::chr6:125661510..125661529,+#_d289c71326fe32940a60cef02859dd36 | p5@Ano2 |
| 9.51e-16 | FFCP PHASE1:Mm9::chr10:74787686..74787708,+#_d289c71326fe32940a60cef02859dd36 | p@chr10:74787686..74787708, + |
| 9.51e-16 | FFCP PHASE1:Mm9::chr6:125661510..125661529,+#_d289c71326fe32940a60cef02859dd36 | p5@Ano2 |
| 1.33e-15 | FFCP PHASE2:Mm9::chr17:49668379..49668388,-#_352f6fc597c067439db02a0de411fef5 | p@chr17:49668379..49668388, - |
| 1.33e-15 | FFCP PHASE1:Mm9::chr17:49668379..49668388,-#_352f6fc597c067439db02a0de411fef5 | p@chr17:49668379..49668388, - |
| 1.86e-15 | FFCP PHASE2:Mm9::chr2:67354526..67354533,-#_622f27da6cb9a982ced03f3e265951ea | p3@ENSMUST00000142314 |
| 1.86e-15 | FFCP PHASE2:Mm9::chr14:48268777..48268795,+#_622f27da6cb9a982ced03f3e265951ea | p3@Ktn1 |
| 1.86e-15 | FFCP PHASE2:Mm9::chr2:57219874..57219885,+#_622f27da6cb9a982ced03f3e265951ea | p@chr2:57219874..57219885, + |
| 1.86e-15 | FFCP PHASE2:Mm9::chr16:34223275..34223284,-#_622f27da6cb9a982ced03f3e265951ea | p@chr16:34223275..34223284, - |
| 1.86e-15 | FFCP PHASE1:Mm9::chr16:34223275..34223284,-#_622f27da6cb9a982ced03f3e265951ea | p@chr16:34223275..34223284, - |
| 1.86e-15 | FFCP PHASE1:Mm9::chr2:67354526..67354533,-#_622f27da6cb9a982ced03f3e265951ea | p3@ENSMUST00000142314 |
| 1.86e-15 | FFCP PHASE2:Mm9::chr3:65507480..65507484,+#_622f27da6cb9a982ced03f3e265951ea | p@chr3:65507480..65507484, + |
| 1.86e-15 | FFCP PHASE2:Mm9::chr1:155964760..155964772,-#_622f27da6cb9a982ced03f3e265951ea | p1@uc007das.1 |
| 1.86e-15 | FFCP PHASE2:Mm9::chr1:66743268..66743289,+#_622f27da6cb9a982ced03f3e265951ea | p@chr1:66743268..66743289, + |
| 1.86e-15 | FFCP PHASE1:Mm9::chr3:65507480..65507484,+#_622f27da6cb9a982ced03f3e265951ea | p@chr3:65507480..65507484, + |
| 1.86e-15 | FFCP PHASE1:Mm9::chr11:67466144..67466155,+#_622f27da6cb9a982ced03f3e265951ea | p19@Gas7 |
| 1.86e-15 | FFCP PHASE1:Mm9::chr9:62384753..62384758,-#_622f27da6cb9a982ced03f3e265951ea | p16@Coro2b |
