CL:0000622: Difference between revisions
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|id=CL:0000622 | |id=CL:0000622 | ||
|name=acinar cell | |name=acinar cell | ||
|namespace=efo | |namespace=cell;;efo | ||
|def="A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus)." [GOC:tfm, http://www.copewithcytokines.de] | |def="A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus)." [GOC:tfm, http://www.copewithcytokines.de] | ||
|xref=FMA:83625 | |xref=FMA:83625 | ||
|is_a=CL:0000150 | |is_a=CL:0000150;;CL:0000154;;EFO:0002966 | ||
|synonym="acinic cell" EXACT [];;"acinous cell" EXACT [] | |synonym="acinic cell" EXACT [];;"acinous cell" EXACT [] | ||
|comment= | |comment= | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
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|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:25, 26 June 2012
| Name: | acinar cell | ||
|---|---|---|---|
| Namespace: | cell;;efo | ||
| Definition: | "A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus)." [GOC:tfm, http://www.copewithcytokines.de] | ||
| Xrefs: |
| ||
| Synonyms: |
"acinic cell" EXACT [] "acinous cell" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000150(glandular epithelial cell),CL:0000154(protein secreting cell),EFO:0002966() |
|---|
Children
| is a: | CL:0002140 (acinar cell of sebaceous gland),CL:0002623 (acinar cell of salivary gland) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11220-116B5 (Sebocyte, donor1)
- 11301-117B5 (Sebocyte, donor2)
- 11378-118B1 (Sebocyte, donor3)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
Mouse (Mus musculus)
- 11220-116B5 (Sebocyte, donor1)
- 11301-117B5 (Sebocyte, donor2)
- 11378-118B1 (Sebocyte, donor3)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000622 (acinar cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.76e-118 | FFCP PHASE2:Hg19::chr5:66942627..66942643,-#_3aeb0903a8426315e200e65fc06af76f | p1@ENST00000507298 |
| 7.76e-118 | FFCP PHASE2:Hg19::chr6:25004699..25004706,-#_3aeb0903a8426315e200e65fc06af76f | p@chr6:25004699..25004706, - |
| 7.76e-118 | FFCP PHASE1:Hg19::chr5:66942627..66942643,-#_3aeb0903a8426315e200e65fc06af76f | p1@ENST00000507298 |
| 7.76e-118 | FFCP PHASE1:Hg19::chr6:25004699..25004706,-#_3aeb0903a8426315e200e65fc06af76f | p@chr6:25004699..25004706, - |
| 6.64e-89 | FFCP PHASE1:Hg19::chr6:25004760..25004769,-#_3aa59dc2b2caffaaa7c4544013fe9e02 | p@chr6:25004760..25004769, - |
| 6.64e-89 | FFCP PHASE2:Hg19::chr6:25004888..25004899,-#_3aa59dc2b2caffaaa7c4544013fe9e02 | p@chr6:25004888..25004899, - |
| 6.64e-89 | FFCP PHASE2:Hg19::chr6:25004760..25004769,-#_3aa59dc2b2caffaaa7c4544013fe9e02 | p@chr6:25004760..25004769, - |
| 6.64e-89 | FFCP PHASE1:Hg19::chr6:25004888..25004899,-#_3aa59dc2b2caffaaa7c4544013fe9e02 | p@chr6:25004888..25004899, - |
| 1.64e-88 | FFCP PHASE2:Hg19::chr12:966094..966103,+#_0dfcb820e9dd29d5cb24b88cabb1d24f | p@chr12:966094..966103, + |
| 1.64e-88 | FFCP PHASE1:Hg19::chr12:966094..966103,+#_0dfcb820e9dd29d5cb24b88cabb1d24f | p@chr12:966094..966103, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr3:48471830..48471839,-#_cfd9904b1e70c7ca3b6c91a117e37db0 | p27@PLXNB1 |
| 3.49e-79 | FFCP PHASE1:Hg19::chr3:48471830..48471839,-#_cfd9904b1e70c7ca3b6c91a117e37db0 | p27@PLXNB1 |
| 1.56e-71 | FFCP PHASE2:Hg19::chr6:25004791..25004799,-#_5bfe441feb19a7c4e5da38f06c888c48 | p@chr6:25004791..25004799, - |
| 1.56e-71 | FFCP PHASE1:Hg19::chr6:25004791..25004799,-#_5bfe441feb19a7c4e5da38f06c888c48 | p@chr6:25004791..25004799, - |
| 3.1e-70 | FFCP PHASE2:Hg19::chr15:95334390..95334402,-#_f3866eea505da2b22cae47baa1b1e630 | p@chr15:95334390..95334402, - |
| 3.1e-70 | FFCP PHASE1:Hg19::chr15:95334390..95334402,-#_f3866eea505da2b22cae47baa1b1e630 | p@chr15:95334390..95334402, - |
| 5.29e-70 | FFCP PHASE1:Hg19::chr10:47740297..47740299,+#_310b35c9379eee5d134a30ac2bf67255 | p1@FAM25HP |
| 5.29e-70 | FFCP PHASE2:Hg19::chr10:47740297..47740299,+#_310b35c9379eee5d134a30ac2bf67255 | p1@FAM25HP |
| 2.17e-63 | FFCP PHASE1:Hg19::chr17:38978586..38978620,-#_5d0c56e07ca6783574d85a03b065667c | p5@KRT10 |
| 2.17e-63 | FFCP PHASE2:Hg19::chr17:38978586..38978620,-#_5d0c56e07ca6783574d85a03b065667c | p5@KRT10 |
| 6.03e-60 | FFCP PHASE2:Hg19::chr6:25004678..25004688,-#_35ad16902effc7812ee94135d1b29015 | p@chr6:25004678..25004688, - |
| 6.03e-60 | FFCP PHASE1:Hg19::chr6:25004678..25004688,-#_35ad16902effc7812ee94135d1b29015 | p@chr6:25004678..25004688, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:52912957..52912973,-#_bfbe8eff7edca4d94531bb60c57f5902 | p17@KRT5 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr12:52912957..52912973,-#_bfbe8eff7edca4d94531bb60c57f5902 | p17@KRT5 |
| 8.66e-58 | FFCP PHASE1:Hg19::chr17:38978257..38978272,-#_51f46807c751ce657f259c66bfd5ff58 | p6@KRT10 |
| 8.66e-58 | FFCP PHASE2:Hg19::chr17:38978257..38978272,-#_51f46807c751ce657f259c66bfd5ff58 | p6@KRT10 |
| 1.16e-57 | FFCP PHASE1:Hg19::chr17:38976838..38976861,-#_fd5fa5a957f42ddaf34faeee2a681a1e | p@chr17:38976838..38976861, - |
| 1.16e-57 | FFCP PHASE2:Hg19::chr17:38976838..38976861,-#_fd5fa5a957f42ddaf34faeee2a681a1e | p@chr17:38976838..38976861, - |
| 2.19e-53 | FFCP PHASE2:Hg19::chr7:7604061..7604072,-#_7fee23b4cee9e44033f3008794b1976c | p@chr7:7604061..7604072, - |
| 2.19e-53 | FFCP PHASE1:Hg19::chr7:7604061..7604072,-#_7fee23b4cee9e44033f3008794b1976c | p@chr7:7604061..7604072, - |
| 4.63e-53 | FFCP PHASE1:Hg19::chr10:105830210..105830215,-#_be0f6f144b2916ce389ed6686ba62768 | p@chr10:105830210..105830215, - |
| 4.63e-53 | FFCP PHASE2:Hg19::chr10:105830210..105830215,-#_be0f6f144b2916ce389ed6686ba62768 | p@chr10:105830210..105830215, - |
| 1.37e-51 | FFCP PHASE2:Hg19::chr20:3295706..3295717,-#_59ed437f260fbbba35bf616ff7cbffc5 | p@chr20:3295706..3295717, - |
| 1.37e-51 | FFCP PHASE2:Hg19::chr6:56488575..56488587,-#_59ed437f260fbbba35bf616ff7cbffc5 | p@chr6:56488575..56488587, - |
| 1.37e-51 | FFCP PHASE1:Hg19::chr20:3295706..3295717,-#_59ed437f260fbbba35bf616ff7cbffc5 | p@chr20:3295706..3295717, - |
| 1.37e-51 | FFCP PHASE1:Hg19::chr6:56488575..56488587,-#_59ed437f260fbbba35bf616ff7cbffc5 | p@chr6:56488575..56488587, - |
| 1.94e-51 | FFCP PHASE1:Hg19::chr17:38978519..38978529,-#_9dddf8becce29017fad09cfd0f78370a | p9@KRT10 |
| 1.94e-51 | FFCP PHASE2:Hg19::chr17:38978519..38978529,-#_9dddf8becce29017fad09cfd0f78370a | p9@KRT10 |
| 2.73e-51 | FFCP PHASE2:Hg19::chr17:38978422..38978432,-#_9dbb99458bca03cbe22ef45aeb3b7f77 | p12@KRT10 |
| 2.73e-51 | FFCP PHASE1:Hg19::chr17:38978422..38978432,-#_9dbb99458bca03cbe22ef45aeb3b7f77 | p12@KRT10 |
| 9.94e-45 | FFCP PHASE1:Hg19::chr2:19428508..19428522,-#_21e0296c8febc711ce551d652863dc00 | p@chr2:19428508..19428522, - |
| 9.94e-45 | FFCP PHASE2:Hg19::chr2:19428508..19428522,-#_21e0296c8febc711ce551d652863dc00 | p@chr2:19428508..19428522, - |
| 1.31e-43 | FFCP PHASE1:Hg19::chr10:118187381..118187397,+#_d1bad2fa7c54d7909354457be015ad17 | p3@PNLIPRP3 |
| 1.31e-43 | FFCP PHASE2:Hg19::chr10:118187381..118187397,+#_d1bad2fa7c54d7909354457be015ad17 | p3@PNLIPRP3 |
| 8.62e-43 | FFCP PHASE2:Hg19::chr1:153044083..153044088,-#_2a56d14602196b68b958c37dff06ebf0 | p1@SPRR2B |
| 8.62e-43 | FFCP PHASE1:Hg19::chr1:153044083..153044088,-#_2a56d14602196b68b958c37dff06ebf0 | p1@SPRR2B |
| 1.32e-42 | FFCP PHASE1:Hg19::chr10:102981544..102981563,+#_d2c962a99da13b363805cdf23da45a25 | p@chr10:102981544..102981563, + |
| 1.32e-42 | FFCP PHASE2:Hg19::chr10:102981544..102981563,+#_d2c962a99da13b363805cdf23da45a25 | p@chr10:102981544..102981563, + |
| 1.3e-40 | FFCP PHASE1:Hg19::chr13:43059605..43059611,+#_91bbee9e4beb7e500f2f2d7062963e3b | p@chr13:43059605..43059611, + |
| 1.3e-40 | FFCP PHASE2:Hg19::chr13:43059605..43059611,+#_91bbee9e4beb7e500f2f2d7062963e3b | p@chr13:43059605..43059611, + |
| 1.3e-40 | FFCP PHASE1:Hg19::chr6:25004775..25004790,-#_91bbee9e4beb7e500f2f2d7062963e3b | p@chr6:25004775..25004790, - |
| 1.3e-40 | FFCP PHASE2:Hg19::chr6:25004775..25004790,-#_91bbee9e4beb7e500f2f2d7062963e3b | p@chr6:25004775..25004790, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr17:38975839..38975846,-#_79a27503c8b9ee93c473e83d7e1ad66a | p14@KRT10 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr17:38978288..38978293,-#_79a27503c8b9ee93c473e83d7e1ad66a | p21@KRT10 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr11:86285462..86285463,-#_79a27503c8b9ee93c473e83d7e1ad66a | p@chr11:86285462..86285463, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr17:38977367..38977371,-#_79a27503c8b9ee93c473e83d7e1ad66a | p@chr17:38977367..38977371, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr20:3295742..3295749,-#_79a27503c8b9ee93c473e83d7e1ad66a | p@chr20:3295742..3295749, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr11:86285462..86285463,-#_79a27503c8b9ee93c473e83d7e1ad66a | p@chr11:86285462..86285463, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr17:38977367..38977371,-#_79a27503c8b9ee93c473e83d7e1ad66a | p@chr17:38977367..38977371, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr17:38975839..38975846,-#_79a27503c8b9ee93c473e83d7e1ad66a | p14@KRT10 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr17:38978288..38978293,-#_79a27503c8b9ee93c473e83d7e1ad66a | p21@KRT10 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr20:3295742..3295749,-#_79a27503c8b9ee93c473e83d7e1ad66a | p@chr20:3295742..3295749, - |
| 1.95e-40 | FFCP PHASE1:Hg19::chr12:3600112..3600125,+#_59b2094f3a15385bb30b1efe0244f43b | p6@PRMT8 |
| 1.95e-40 | FFCP PHASE2:Hg19::chr12:3600112..3600125,+#_59b2094f3a15385bb30b1efe0244f43b | p6@PRMT8 |
| 2.23e-40 | FFCP PHASE2:Hg19::chr17:38976601..38976615,-#_8857bc329530913739eb31768fd971ed | p@chr17:38976601..38976615, - |
| 2.23e-40 | FFCP PHASE1:Hg19::chr17:38976601..38976615,-#_8857bc329530913739eb31768fd971ed | p@chr17:38976601..38976615, - |
| 2.71e-40 | FFCP PHASE2:Hg19::chr17:38976882..38976895,-#_68015ee5fc0faa07a256312ba76ab382 | p@chr17:38976882..38976895, - |
| 2.71e-40 | FFCP PHASE1:Hg19::chr1:153321274..153321283,-#_68015ee5fc0faa07a256312ba76ab382 | p2@PGLYRP4 |
| 2.71e-40 | FFCP PHASE1:Hg19::chr3:140961094..140961103,+#_68015ee5fc0faa07a256312ba76ab382 | p@chr3:140961094..140961103, + |
| 2.71e-40 | FFCP PHASE1:Hg19::chr17:38976882..38976895,-#_68015ee5fc0faa07a256312ba76ab382 | p@chr17:38976882..38976895, - |
| 2.71e-40 | FFCP PHASE2:Hg19::chr1:153321274..153321283,-#_68015ee5fc0faa07a256312ba76ab382 | p2@PGLYRP4 |
| 2.71e-40 | FFCP PHASE2:Hg19::chr3:140961094..140961103,+#_68015ee5fc0faa07a256312ba76ab382 | p@chr3:140961094..140961103, + |
| 3.31e-40 | FFCP PHASE1:Hg19::chrY:7671916..7671924,-#_95ee9a3d8709ab914eefea770e3af7ab | p@chrY:7671916..7671924, - |
| 3.31e-40 | FFCP PHASE2:Hg19::chrY:7671916..7671924,-#_95ee9a3d8709ab914eefea770e3af7ab | p@chrY:7671916..7671924, - |
| 3.33e-40 | FFCP PHASE2:Hg19::chr17:38978621..38978636,-#_78fe83f89bb42cc173d501ebbc9e3a30 | p8@KRT10 |
| 3.33e-40 | FFCP PHASE1:Hg19::chr17:38978621..38978636,-#_78fe83f89bb42cc173d501ebbc9e3a30 | p8@KRT10 |
| 4.98e-40 | FFCP PHASE1:Hg19::chr17:38976811..38976823,-#_3a361658ae03511a3a99effcde38fd88 | p@chr17:38976811..38976823, - |
| 4.98e-40 | FFCP PHASE2:Hg19::chr17:38976811..38976823,-#_3a361658ae03511a3a99effcde38fd88 | p@chr17:38976811..38976823, - |
| 9.66e-40 | FFCP PHASE1:Hg19::chr1:152943122..152943128,+#_4fdfaec3117b7b62a795a8f0062b6087 | p1@SPRR4 |
| 9.66e-40 | FFCP PHASE2:Hg19::chr1:152943122..152943128,+#_4fdfaec3117b7b62a795a8f0062b6087 | p1@SPRR4 |
| 1.27e-39 | FFCP PHASE2:Hg19::chr17:38984452..38984467,+#_0f0c5f8d5594b7d6304ce9d45e3b8aca | p@chr17:38984452..38984467, + |
| 1.27e-39 | FFCP PHASE1:Hg19::chr17:38984452..38984467,+#_0f0c5f8d5594b7d6304ce9d45e3b8aca | p@chr17:38984452..38984467, + |
| 1.58e-39 | FFCP PHASE2:Hg19::chr2:131669765..131669776,+#_418b1e3e7760017af729f388a514dfb1 | p@chr2:131669765..131669776, + |
| 1.58e-39 | FFCP PHASE1:Hg19::chr2:131669765..131669776,+#_418b1e3e7760017af729f388a514dfb1 | p@chr2:131669765..131669776, + |
| 1.98e-38 | FFCP PHASE2:Hg19::chr17:39742637..39742657,-#_1c8da2154f8fa2015659edc7896b03f9 | p3@BC127260 |
| 1.98e-38 | FFCP PHASE1:Hg19::chr17:39742637..39742657,-#_1c8da2154f8fa2015659edc7896b03f9 | p3@BC127260 |
| 2.23e-37 | FFCP PHASE2:Hg19::chr17:73753308..73753323,+#_731de084cffffa683d0bf2e9d4642593 | p@chr17:73753308..73753323, + |
| 2.23e-37 | FFCP PHASE1:Hg19::chr17:73753308..73753323,+#_731de084cffffa683d0bf2e9d4642593 | p@chr17:73753308..73753323, + |
| 4.68e-37 | FFCP PHASE1:Hg19::chr5:159849211..159849231,+#_f79d220aad18bc68800d390bde724350 | p5@PTTG1 |
| 4.68e-37 | FFCP PHASE2:Hg19::chr5:159849211..159849231,+#_f79d220aad18bc68800d390bde724350 | p5@PTTG1 |
| 1.57e-36 | FFCP PHASE2:Hg19::chr1:197657822..197657832,+#_49dab3b70c9f47c6efa461f7bd3c4694 | p1@EEF1A1P32 |
| 1.57e-36 | FFCP PHASE1:Hg19::chr1:197657822..197657832,+#_49dab3b70c9f47c6efa461f7bd3c4694 | p1@EEF1A1P32 |
| 1.66e-36 | FFCP PHASE1:Hg19::chr1:2360073..2360082,+#_ccef37d6070609de6f592eaab974a40b | p@chr1:2360073..2360082, + |
| 1.66e-36 | FFCP PHASE2:Hg19::chr1:2360073..2360082,+#_ccef37d6070609de6f592eaab974a40b | p@chr1:2360073..2360082, + |
| 2.88e-36 | FFCP PHASE1:Hg19::chr1:152769195..152769200,+#_857c99a923b19c309cb435ba1d8d55c1 | p1@LCE1D |
| 2.88e-36 | FFCP PHASE2:Hg19::chr1:152769195..152769200,+#_857c99a923b19c309cb435ba1d8d55c1 | p1@LCE1D |
| 3.66e-36 | FFCP PHASE2:Hg19::chr17:38652332..38652344,-#_d2504a56bc9002a35cd63e62158b3676 | p18@TNS4 |
| 3.66e-36 | FFCP PHASE1:Hg19::chr17:38652332..38652344,-#_d2504a56bc9002a35cd63e62158b3676 | p18@TNS4 |
| 8.06e-36 | FFCP PHASE2:Hg19::chr1:152798501..152798507,+#_29ea003e39c20297cf16fa681a2f0090 | p1@LCE1A |
| 8.06e-36 | FFCP PHASE1:Hg19::chr1:152798501..152798507,+#_29ea003e39c20297cf16fa681a2f0090 | p1@LCE1A |
