CL:0002368: Difference between revisions
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{{CL | {{CL | ||
|id=CL:0002368 | |id=CL:0002368 | ||
|name=respiratory epithelial cell | |name=airway epithelial cell;;respiratory epithelial cell | ||
|namespace=efo | |namespace=cell;;efo | ||
|def="An endo-epithelial cell of the respiratory tract." [GOC:tfm] | |def="An endo-epithelial cell of the respiratory tract." [GOC:tfm] | ||
|xref=BTO:0004533 | |xref=BTO:0004533 | ||
|is_a= | |is_a=CL:0002076 | ||
|synonym="airway epithelial cell" EXACT [] | |synonym="airway epithelial cell" EXACT [] | ||
|comment= | |comment= | ||
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|obo_creation_date=2010-09-23T04:38:49Z | |obo_creation_date=2010-09-23T04:38:49Z | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} |
Revision as of 17:27, 26 June 2012
Name: | airway epithelial cell;;respiratory epithelial cell | |
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Namespace: | cell;;efo | |
Definition: | "An endo-epithelial cell of the respiratory tract." [GOC:tfm] | |
Xrefs: |
| |
Synonyms: | "airway epithelial cell" EXACT [] | |
Created by: | tmeehan | |
Creation date: | 2010-09-23T04:38:49Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0002076(endo-epithelial cell) |
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Children
is a: | CL:0002632 (epithelial cell of lower respiratory tract) |
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derives from: | FF:0000166 (human small airway epithelial cell sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
- 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
- 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)
- 11256-116F5 (Small Airway Epithelial Cells, donor1)
- 11292-117A5 (Tracheal Epithelial Cells, donor1)
- 11334-117F2 (Small Airway Epithelial Cells, donor2)
- 11369-118A1 (Tracheal Epithelial Cells, donor2)
- 11406-118E2 (Small Airway Epithelial Cells, donor3)
- 11441-118I1 (Tracheal Epithelial Cells, donor3)
- 11453-119A4 (Bronchial Epithelial Cell, donor4)
... further results Mouse (Mus musculus)
- 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
- 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
- 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)
- 11256-116F5 (Small Airway Epithelial Cells, donor1)
- 11292-117A5 (Tracheal Epithelial Cells, donor1)
- 11334-117F2 (Small Airway Epithelial Cells, donor2)
- 11369-118A1 (Tracheal Epithelial Cells, donor2)
- 11406-118E2 (Small Airway Epithelial Cells, donor3)
- 11441-118I1 (Tracheal Epithelial Cells, donor3)
- 11453-119A4 (Bronchial Epithelial Cell, donor4)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002368 (airway epithelial cell;;respiratory epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data