UBERON:0004139: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 15: | Line 15: | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0003084 | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0000922 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:35, 27 June 2012
| Name: | cardiogenic plate | ||
|---|---|---|---|
| Definition: | "The first recognizable structure derived from the heart field" [GO:0003142] | ||
| Xrefs: |
| ||
| Synonyms: |
"cardiogenic crescent" RELATED [GO:0003142] "heart rudiment" RELATED [] "myocardial plate" EXACT [EHDAA2:0000215] | ||
| Comments: | TODO - check plate vs rudiment vs primordium vs endocardial tube. See XAO |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| develops_from: | UBERON:0003084(heart primordium) |
| part_of: | UBERON:0000922(embryo) |
Children
| develops from: | UBERON:0004291 (heart rudiment) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004139 (cardiogenic plate), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.09e-81 | FFCP PHASE2:Mm9::chr9:24549775..24549776,-#_e33304ad35cc77872abc2b5c6f8c31c5 | p@chr9:24549775..24549776, - |
| 1.09e-81 | FFCP PHASE1:Mm9::chr4:147375434..147375447,+#_e33304ad35cc77872abc2b5c6f8c31c5 | p@chr4:147375434..147375447, + |
| 1.09e-81 | FFCP PHASE2:Mm9::chr1:137747392..137747402,-#_e33304ad35cc77872abc2b5c6f8c31c5 | p@chr1:137747392..137747402, - |
| 1.09e-81 | FFCP PHASE1:Mm9::chr1:137747392..137747402,-#_e33304ad35cc77872abc2b5c6f8c31c5 | p@chr1:137747392..137747402, - |
| 1.09e-81 | FFCP PHASE2:Mm9::chr4:147375434..147375447,+#_e33304ad35cc77872abc2b5c6f8c31c5 | p@chr4:147375434..147375447, + |
| 1.09e-81 | FFCP PHASE1:Mm9::chr9:24549775..24549776,-#_e33304ad35cc77872abc2b5c6f8c31c5 | p@chr9:24549775..24549776, - |
| 1.88e-78 | FFCP PHASE1:Mm9::chr4:140980456..140980463,+#_8e22d1030c5ae49756d104e6ea9d844a | p@chr4:140980456..140980463, + |
| 1.88e-78 | FFCP PHASE2:Mm9::chr4:140980456..140980463,+#_8e22d1030c5ae49756d104e6ea9d844a | p@chr4:140980456..140980463, + |
| 1.92e-77 | FFCP PHASE1:Mm9::chr12:113728951..113728965,+#_454a59e0ab45ae3b8a8a89074936aa6b | p@chr12:113728951..113728965, + |
| 1.92e-77 | FFCP PHASE2:Mm9::chr12:113728951..113728965,+#_454a59e0ab45ae3b8a8a89074936aa6b | p@chr12:113728951..113728965, + |
| 1.92e-77 | FFCP PHASE1:Mm9::chr1:137737483..137737497,-#_454a59e0ab45ae3b8a8a89074936aa6b | p@chr1:137737483..137737497, - |
| 1.92e-77 | FFCP PHASE2:Mm9::chr1:137737483..137737497,-#_454a59e0ab45ae3b8a8a89074936aa6b | p@chr1:137737483..137737497, - |
| 2.14e-77 | FFCP PHASE1:Mm9::chr4:147375200..147375220,+#_43ba11150388c3844f59ce18695c0d75 | p@chr4:147375200..147375220, + |
| 2.14e-77 | FFCP PHASE2:Mm9::chr4:147375200..147375220,+#_43ba11150388c3844f59ce18695c0d75 | p@chr4:147375200..147375220, + |
| 2.14e-77 | FFCP PHASE1:Mm9::chr19:36187511..36187515,-#_43ba11150388c3844f59ce18695c0d75 | p@chr19:36187511..36187515, - |
| 2.14e-77 | FFCP PHASE2:Mm9::chr19:36187511..36187515,-#_43ba11150388c3844f59ce18695c0d75 | p@chr19:36187511..36187515, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55586837..55586880,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55586837..55586880, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137744668..137744681,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137744668..137744681, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55568937..55568988,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55568937..55568988, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137744611..137744621,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137744611..137744621, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137744550..137744565,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137744550..137744565, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr5:120286706..120286736,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr5:120286706..120286736, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55579265..55579297,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55579265..55579297, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137747953..137747967,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137747953..137747967, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55572120..55572173,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55572120..55572173, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr19:36193772..36193793,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr19:36193772..36193793, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55586837..55586880,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55586837..55586880, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr4:147375901..147375913,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr4:147375901..147375913, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr15:88850827..88850850,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p2@Mov10l1 |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55568790..55568803,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55568790..55568803, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137744333..137744352,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137744333..137744352, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137747953..137747967,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137747953..137747967, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55584272..55584298,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55584272..55584298, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55572120..55572173,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55572120..55572173, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr11:65461897..65461929,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr11:65461897..65461929, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137744636..137744654,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137744636..137744654, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55584197..55584239,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55584197..55584239, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55565785..55565833,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55565785..55565833, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137747382..137747385,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137747382..137747385, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137745434..137745445,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137745434..137745445, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55584663..55584731,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55584663..55584731, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55581579..55581620,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55581579..55581620, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137743272..137743307,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137743272..137743307, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137744550..137744565,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137744550..137744565, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137747382..137747385,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137747382..137747385, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55584663..55584731,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55584663..55584731, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55581579..55581620,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55581579..55581620, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55571909..55571953,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55571909..55571953, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137744636..137744654,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137744636..137744654, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr19:36193772..36193793,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr19:36193772..36193793, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr11:65461897..65461929,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr11:65461897..65461929, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55565785..55565833,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55565785..55565833, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr4:147375901..147375913,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr4:147375901..147375913, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55568737..55568746,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55568737..55568746, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55568790..55568803,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55568790..55568803, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137745434..137745445,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137745434..137745445, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr15:88850827..88850850,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p2@Mov10l1 |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55571909..55571953,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55571909..55571953, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55568937..55568988,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55568937..55568988, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr11:58815923..58815951,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr11:58815923..58815951, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55563577..55563611,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55563577..55563611, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137747289..137747313,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137747289..137747313, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137744668..137744681,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137744668..137744681, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137744611..137744621,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137744611..137744621, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55579265..55579297,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55579265..55579297, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137743272..137743307,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137743272..137743307, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr1:137747289..137747313,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137747289..137747313, + |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55584272..55584298,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55584272..55584298, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55584197..55584239,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55584197..55584239, - |
| 8.14e-77 | FFCP PHASE2:Mm9::chr1:137744333..137744352,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr1:137744333..137744352, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr5:120286706..120286736,+#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr5:120286706..120286736, + |
| 8.14e-77 | FFCP PHASE2:Mm9::chr14:55563577..55563611,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55563577..55563611, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr14:55568737..55568746,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr14:55568737..55568746, - |
| 8.14e-77 | FFCP PHASE1:Mm9::chr11:58815923..58815951,-#_337c7082c8c2ac7ecc4ba79deffa1ca1 | p@chr11:58815923..58815951, - |
| 1.2e-73 | FFCP PHASE2:Mm9::chr1:137742152..137742184,-#_92bb60a5d4125ed7abb10711d0799325 | p@chr1:137742152..137742184, - |
| 1.2e-73 | FFCP PHASE1:Mm9::chr1:137742152..137742184,-#_92bb60a5d4125ed7abb10711d0799325 | p@chr1:137742152..137742184, - |
| 1.46e-72 | FFCP PHASE2:Mm9::chr14:55577329..55577367,-#_f2e11997b831a153006a1cb69a2ed4f1 | p@chr14:55577329..55577367, - |
| 1.46e-72 | FFCP PHASE1:Mm9::chr7:4473478..4473505,-#_f2e11997b831a153006a1cb69a2ed4f1 | p2@Tnni3 |
| 1.46e-72 | FFCP PHASE2:Mm9::chr1:137742470..137742481,+#_f2e11997b831a153006a1cb69a2ed4f1 | p@chr1:137742470..137742481, + |
| 1.46e-72 | FFCP PHASE2:Mm9::chr16:5431481..5431510,+#_f2e11997b831a153006a1cb69a2ed4f1 | p@chr16:5431481..5431510, + |
| 1.46e-72 | FFCP PHASE1:Mm9::chr1:137742470..137742481,+#_f2e11997b831a153006a1cb69a2ed4f1 | p@chr1:137742470..137742481, + |
| 1.46e-72 | FFCP PHASE1:Mm9::chr14:55577329..55577367,-#_f2e11997b831a153006a1cb69a2ed4f1 | p@chr14:55577329..55577367, - |
| 1.46e-72 | FFCP PHASE1:Mm9::chr16:5431481..5431510,+#_f2e11997b831a153006a1cb69a2ed4f1 | p@chr16:5431481..5431510, + |
| 1.46e-72 | FFCP PHASE2:Mm9::chr7:4473478..4473505,-#_f2e11997b831a153006a1cb69a2ed4f1 | p2@Tnni3 |
| 1.63e-72 | FFCP PHASE2:Mm9::chr16:38713504..38713520,-#_a157c5def70328c63e09d872a6247fd5 | p11@Arhgap31 |
| 1.63e-72 | FFCP PHASE1:Mm9::chr2:17382210..17382221,-#_a157c5def70328c63e09d872a6247fd5 | p5@Nebl |
| 1.63e-72 | FFCP PHASE2:Mm9::chr2:17382210..17382221,-#_a157c5def70328c63e09d872a6247fd5 | p5@Nebl |
| 1.63e-72 | FFCP PHASE1:Mm9::chr19:36193739..36193752,-#_a157c5def70328c63e09d872a6247fd5 | p@chr19:36193739..36193752, - |
| 1.63e-72 | FFCP PHASE2:Mm9::chr2:113880065..113880076,+#_a157c5def70328c63e09d872a6247fd5 | p1@ENSMUST00000154140 |
| 1.63e-72 | FFCP PHASE1:Mm9::chr5:58108164..58108178,+#_a157c5def70328c63e09d872a6247fd5 | p@chr5:58108164..58108178, + |
| 1.63e-72 | FFCP PHASE1:Mm9::chr16:38713504..38713520,-#_a157c5def70328c63e09d872a6247fd5 | p11@Arhgap31 |
| 1.63e-72 | FFCP PHASE2:Mm9::chr19:36193739..36193752,-#_a157c5def70328c63e09d872a6247fd5 | p@chr19:36193739..36193752, - |
| 1.63e-72 | FFCP PHASE1:Mm9::chr10:53062244..53062249,+#_a157c5def70328c63e09d872a6247fd5 | p@chr10:53062244..53062249, + |
| 1.63e-72 | FFCP PHASE1:Mm9::chr2:113880065..113880076,+#_a157c5def70328c63e09d872a6247fd5 | p1@ENSMUST00000154140 |
| 1.63e-72 | FFCP PHASE2:Mm9::chr5:58108164..58108178,+#_a157c5def70328c63e09d872a6247fd5 | p@chr5:58108164..58108178, + |
| 1.63e-72 | FFCP PHASE2:Mm9::chr10:53062244..53062249,+#_a157c5def70328c63e09d872a6247fd5 | p@chr10:53062244..53062249, + |
| 1.82e-72 | FFCP PHASE2:Mm9::chr9:24529233..24529237,-#_01790abf9a716b15a3826fe2ea3fd98c | p@chr9:24529233..24529237, - |
| 1.82e-72 | FFCP PHASE1:Mm9::chr9:24529233..24529237,-#_01790abf9a716b15a3826fe2ea3fd98c | p@chr9:24529233..24529237, - |
| 2.03e-72 | FFCP PHASE1:Mm9::chr2:30851059..30851089,+#_0ebfd5d6acc017fc79382df0de8d65c1 | p6@Usp20 |
| 2.03e-72 | FFCP PHASE2:Mm9::chr2:30851059..30851089,+#_0ebfd5d6acc017fc79382df0de8d65c1 | p6@Usp20 |
