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UBERON:0007844: Difference between revisions

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Revision as of 13:43, 27 June 2012

Name:cartilaginous element
Definition:"Skeletal element that is composed of cartilage tissue and may be permanent or transient." [VSAO:curator]
Xrefs:
links:

AAO:0011130
FMA:55107
VSAO:0000000
XAO:0004013

ZFA:0001501
Synonyms: "cartilage" RELATED [VSAO:0000000]
"cartilage element" EXACT []
"cartilage organ" EXACT [FMA:55107]
"chondrogenic element" EXACT [VSAO:0000000]
Comments:AO notes: TAO still mixes tissue and element
Subset: organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004765(skeletal element)
develops_from:UBERON:0005863(cartilaginous condensation)



Children

is a:UBERON:0010885 (hindlimb cartilage element),UBERON:0011135 (intervertebral cartilage)
develops from:UBERON:0002513 (endochondral bone)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007844 (cartilaginous element), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data