Personal tools

CL:0000375: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 15: Line 15:
|subset=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=CL:0000335
|has_quality=
|has_quality=
|located_in=
|located_in=

Latest revision as of 13:01, 27 June 2012

Name:osteoprogenitor cell
Namespace:cell
Xrefs:
links:
BTO:0002051


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000035(single fate stem cell)
develops_from:CL:0000335(mesenchyme condensation cell)



Children


NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000375 (osteoprogenitor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
6.65e-72FFCP PHASE1:Hg19::chr8:38470503..38470508,+#_ba18ba579cb866f125cb31c887537be1p@chr8:38470503..38470508, +
6.65e-72FFCP PHASE2:Hg19::chr8:38470503..38470508,+#_ba18ba579cb866f125cb31c887537be1p@chr8:38470503..38470508, +
6.65e-72FFCP PHASE1:Hg19::chr12:53729525..53729541,-#_ba18ba579cb866f125cb31c887537be1p5@SP7
6.65e-72FFCP PHASE2:Hg19::chr12:53729525..53729541,-#_ba18ba579cb866f125cb31c887537be1p5@SP7
2.16e-54FFCP PHASE1:Hg19::chr11:124481361..124481366,+#_7fa312f75b3aab51e580e6ff548f3161p2@PANX3
2.16e-54FFCP PHASE2:Hg19::chr6:45295874..45295877,+#_7fa312f75b3aab51e580e6ff548f3161p47@RUNX2
2.16e-54FFCP PHASE1:Hg19::chr9:116398779..116398800,+#_7fa312f75b3aab51e580e6ff548f3161p@chr9:116398779..116398800, +
2.16e-54FFCP PHASE1:Hg19::chr6:155427848..155427862,+#_7fa312f75b3aab51e580e6ff548f3161p@chr6:155427848..155427862, +
2.16e-54FFCP PHASE2:Hg19::chr1:199050926..199050944,-#_7fa312f75b3aab51e580e6ff548f3161p@chr1:199050926..199050944, -
2.16e-54FFCP PHASE2:Hg19::chr12:53729546..53729565,-#_7fa312f75b3aab51e580e6ff548f3161p4@SP7
2.16e-54FFCP PHASE2:Hg19::chr1:62392630..62392651,+#_7fa312f75b3aab51e580e6ff548f3161p@chr1:62392630..62392651, +
2.16e-54FFCP PHASE2:Hg19::chr6:45296266..45296277,+#_7fa312f75b3aab51e580e6ff548f3161p34@RUNX2
2.16e-54FFCP PHASE2:Hg19::chr6:155427848..155427862,+#_7fa312f75b3aab51e580e6ff548f3161p@chr6:155427848..155427862, +
2.16e-54FFCP PHASE1:Hg19::chr6:36733583..36733590,-#_7fa312f75b3aab51e580e6ff548f3161p@chr6:36733583..36733590, -
2.16e-54FFCP PHASE1:Hg19::chr11:124479851..124479862,-#_7fa312f75b3aab51e580e6ff548f3161p@chr11:124479851..124479862, -
2.16e-54FFCP PHASE2:Hg19::chr9:116398779..116398800,+#_7fa312f75b3aab51e580e6ff548f3161p@chr9:116398779..116398800, +
2.16e-54FFCP PHASE1:Hg19::chr6:45296391..45296400,+#_7fa312f75b3aab51e580e6ff548f3161p52@RUNX2
2.16e-54FFCP PHASE2:Hg19::chr11:124481361..124481366,+#_7fa312f75b3aab51e580e6ff548f3161p2@PANX3
2.16e-54FFCP PHASE1:Hg19::chr11:124482705..124482719,+#_7fa312f75b3aab51e580e6ff548f3161p@chr11:124482705..124482719, +
2.16e-54FFCP PHASE2:Hg19::chr6:36733583..36733590,-#_7fa312f75b3aab51e580e6ff548f3161p@chr6:36733583..36733590, -
2.16e-54FFCP PHASE2:Hg19::chr11:124479851..124479862,-#_7fa312f75b3aab51e580e6ff548f3161p@chr11:124479851..124479862, -
2.16e-54FFCP PHASE2:Hg19::chr6:45296391..45296400,+#_7fa312f75b3aab51e580e6ff548f3161p52@RUNX2
2.16e-54FFCP PHASE1:Hg19::chr11:124480065..124480072,-#_7fa312f75b3aab51e580e6ff548f3161p@chr11:124480065..124480072, -
2.16e-54FFCP PHASE1:Hg19::chr12:91395963..91395968,-#_7fa312f75b3aab51e580e6ff548f3161p@chr12:91395963..91395968, -
2.16e-54FFCP PHASE2:Hg19::chr11:124482705..124482719,+#_7fa312f75b3aab51e580e6ff548f3161p@chr11:124482705..124482719, +
2.16e-54FFCP PHASE1:Hg19::chr1:77864109..77864116,+#_7fa312f75b3aab51e580e6ff548f3161p@chr1:77864109..77864116, +
2.16e-54FFCP PHASE2:Hg19::chr12:91395963..91395968,-#_7fa312f75b3aab51e580e6ff548f3161p@chr12:91395963..91395968, -
2.16e-54FFCP PHASE2:Hg19::chr1:77864109..77864116,+#_7fa312f75b3aab51e580e6ff548f3161p@chr1:77864109..77864116, +
2.16e-54FFCP PHASE2:Hg19::chr11:124480065..124480072,-#_7fa312f75b3aab51e580e6ff548f3161p@chr11:124480065..124480072, -
2.16e-54FFCP PHASE1:Hg19::chr11:124480073..124480086,-#_7fa312f75b3aab51e580e6ff548f3161p@chr11:124480073..124480086, -
2.16e-54FFCP PHASE1:Hg19::chr2:37593656..37593667,+#_7fa312f75b3aab51e580e6ff548f3161p@chr2:37593656..37593667, +
2.16e-54FFCP PHASE1:Hg19::chr6:36733547..36733556,-#_7fa312f75b3aab51e580e6ff548f3161p@chr6:36733547..36733556, -
2.16e-54FFCP PHASE2:Hg19::chr4:88731810..88731821,+#_7fa312f75b3aab51e580e6ff548f3161p@chr4:88731810..88731821, +
2.16e-54FFCP PHASE1:Hg19::chr4:88731810..88731821,+#_7fa312f75b3aab51e580e6ff548f3161p@chr4:88731810..88731821, +
2.16e-54FFCP PHASE1:Hg19::chr9:72436290..72436302,-#_7fa312f75b3aab51e580e6ff548f3161p@chr9:72436290..72436302, -
2.16e-54FFCP PHASE2:Hg19::chr11:124480073..124480086,-#_7fa312f75b3aab51e580e6ff548f3161p@chr11:124480073..124480086, -
2.16e-54FFCP PHASE1:Hg19::chr1:62392583..62392613,+#_7fa312f75b3aab51e580e6ff548f3161p@chr1:62392583..62392613, +
2.16e-54FFCP PHASE1:Hg19::chr11:124481316..124481334,+#_7fa312f75b3aab51e580e6ff548f3161p1@PANX3
2.16e-54FFCP PHASE2:Hg19::chr2:37593656..37593667,+#_7fa312f75b3aab51e580e6ff548f3161p@chr2:37593656..37593667, +
2.16e-54FFCP PHASE2:Hg19::chr6:36733547..36733556,-#_7fa312f75b3aab51e580e6ff548f3161p@chr6:36733547..36733556, -
2.16e-54FFCP PHASE2:Hg19::chr9:72436290..72436302,-#_7fa312f75b3aab51e580e6ff548f3161p@chr9:72436290..72436302, -
2.16e-54FFCP PHASE2:Hg19::chr1:62392583..62392613,+#_7fa312f75b3aab51e580e6ff548f3161p@chr1:62392583..62392613, +
2.16e-54FFCP PHASE1:Hg19::chr6:45295874..45295877,+#_7fa312f75b3aab51e580e6ff548f3161p47@RUNX2
2.16e-54FFCP PHASE1:Hg19::chr1:199050926..199050944,-#_7fa312f75b3aab51e580e6ff548f3161p@chr1:199050926..199050944, -
2.16e-54FFCP PHASE1:Hg19::chr12:53729546..53729565,-#_7fa312f75b3aab51e580e6ff548f3161p4@SP7
2.16e-54FFCP PHASE1:Hg19::chr6:45296266..45296277,+#_7fa312f75b3aab51e580e6ff548f3161p34@RUNX2
2.16e-54FFCP PHASE2:Hg19::chr11:124481316..124481334,+#_7fa312f75b3aab51e580e6ff548f3161p1@PANX3
2.16e-54FFCP PHASE1:Hg19::chr1:62392630..62392651,+#_7fa312f75b3aab51e580e6ff548f3161p@chr1:62392630..62392651, +
1.03e-43FFCP PHASE2:Hg19::chr7:96654015..96654018,-#_e02b19a7345c75eea7d8da724a0a2e73p3@DLX5
1.03e-43FFCP PHASE1:Hg19::chr7:96654015..96654018,-#_e02b19a7345c75eea7d8da724a0a2e73p3@DLX5
4.07e-41FFCP PHASE1:Hg19::chr6:143447228..143447237,+#_8dd6083aee5a647fa7b2658e1455bc20p16@AIG1
4.07e-41FFCP PHASE2:Hg19::chr6:143447228..143447237,+#_8dd6083aee5a647fa7b2658e1455bc20p16@AIG1
4.07e-41FFCP PHASE1:Hg19::chr6:36733594..36733607,-#_8dd6083aee5a647fa7b2658e1455bc20p@chr6:36733594..36733607, -
4.07e-41FFCP PHASE2:Hg19::chr6:36733594..36733607,-#_8dd6083aee5a647fa7b2658e1455bc20p@chr6:36733594..36733607, -
4.07e-41FFCP PHASE1:Hg19::chr12:53721918..53721923,-#_8dd6083aee5a647fa7b2658e1455bc20p@chr12:53721918..53721923, -
4.07e-41FFCP PHASE2:Hg19::chr12:53721918..53721923,-#_8dd6083aee5a647fa7b2658e1455bc20p@chr12:53721918..53721923, -
4.07e-41FFCP PHASE1:Hg19::chr16:53707116..53707125,-#_8dd6083aee5a647fa7b2658e1455bc20p@chr16:53707116..53707125, -
4.07e-41FFCP PHASE2:Hg19::chr16:53707116..53707125,-#_8dd6083aee5a647fa7b2658e1455bc20p@chr16:53707116..53707125, -
4.67e-41FFCP PHASE2:Hg19::chr4:88732513..88732528,+#_b65bf11483877fe46e62017db92226c7p@chr4:88732513..88732528, +
4.67e-41FFCP PHASE1:Hg19::chr4:88732513..88732528,+#_b65bf11483877fe46e62017db92226c7p@chr4:88732513..88732528, +
4.67e-41FFCP PHASE1:Hg19::chr17:1932231..1932269,+#_b65bf11483877fe46e62017db92226c7p@chr17:1932231..1932269, +
4.67e-41FFCP PHASE2:Hg19::chr17:1932231..1932269,+#_b65bf11483877fe46e62017db92226c7p@chr17:1932231..1932269, +
5.35e-41FFCP PHASE1:Hg19::chr2:53859899..53859908,-#_839a5c4dbcfd524cf2d83833ae3f45c6p@chr2:53859899..53859908, -
5.35e-41FFCP PHASE2:Hg19::chr2:53859899..53859908,-#_839a5c4dbcfd524cf2d83833ae3f45c6p@chr2:53859899..53859908, -
6.8e-37FFCP PHASE2:Hg19::chr8:104215580..104215589,-#_53d1f4b52522e8c1638c7ca24c7536aap1@ENST00000523915
6.8e-37FFCP PHASE1:Hg19::chr11:85416548..85416560,-#_53d1f4b52522e8c1638c7ca24c7536aap18@SYTL2
6.8e-37FFCP PHASE1:Hg19::chr7:48078148..48078160,-#_53d1f4b52522e8c1638c7ca24c7536aap@chr7:48078148..48078160, -
6.8e-37FFCP PHASE2:Hg19::chr1:52116793..52116805,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr1:52116793..52116805, +
6.8e-37FFCP PHASE1:Hg19::chr8:104215580..104215589,-#_53d1f4b52522e8c1638c7ca24c7536aap1@ENST00000523915
6.8e-37FFCP PHASE2:Hg19::chr12:67914694..67914707,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr12:67914694..67914707, +
6.8e-37FFCP PHASE2:Hg19::chr17:79968448..79968454,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr17:79968448..79968454, +
6.8e-37FFCP PHASE2:Hg19::chr11:30911556..30911574,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr11:30911556..30911574, +
6.8e-37FFCP PHASE2:Hg19::chr1:39992756..39992784,-#_53d1f4b52522e8c1638c7ca24c7536aap@chr1:39992756..39992784, -
6.8e-37FFCP PHASE1:Hg19::chr17:79968448..79968454,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr17:79968448..79968454, +
6.8e-37FFCP PHASE2:Hg19::chr8:134021151..134021176,-#_53d1f4b52522e8c1638c7ca24c7536aap@chr8:134021151..134021176, -
6.8e-37FFCP PHASE2:Hg19::chr3:55016721..55016732,-#_53d1f4b52522e8c1638c7ca24c7536aap@chr3:55016721..55016732, -
6.8e-37FFCP PHASE2:Hg19::chr2:121684363..121684405,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr2:121684363..121684405, +
6.8e-37FFCP PHASE1:Hg19::chr4:16027038..16027047,-#_53d1f4b52522e8c1638c7ca24c7536aap@chr4:16027038..16027047, -
6.8e-37FFCP PHASE1:Hg19::chr19:28202519..28202528,-#_53d1f4b52522e8c1638c7ca24c7536aap@chr19:28202519..28202528, -
6.8e-37FFCP PHASE1:Hg19::chr9:29942099..29942136,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr9:29942099..29942136, +
6.8e-37FFCP PHASE1:Hg19::chr2:71791188..71791195,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr2:71791188..71791195, +
6.8e-37FFCP PHASE2:Hg19::chr19:28248054..28248062,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr19:28248054..28248062, +
6.8e-37FFCP PHASE1:Hg19::chr8:134021151..134021176,-#_53d1f4b52522e8c1638c7ca24c7536aap@chr8:134021151..134021176, -
6.8e-37FFCP PHASE1:Hg19::chr2:121684363..121684405,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr2:121684363..121684405, +
6.8e-37FFCP PHASE1:Hg19::chr11:131213225..131213274,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr11:131213225..131213274, +
6.8e-37FFCP PHASE2:Hg19::chrX:58169111..58169120,-#_53d1f4b52522e8c1638c7ca24c7536aap@chrX:58169111..58169120, -
6.8e-37FFCP PHASE1:Hg19::chr19:28145289..28145296,-#_53d1f4b52522e8c1638c7ca24c7536aap@chr19:28145289..28145296, -
6.8e-37FFCP PHASE1:Hg19::chr7:25370183..25370193,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr7:25370183..25370193, +
6.8e-37FFCP PHASE1:Hg19::chr11:93129900..93129911,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr11:93129900..93129911, +
6.8e-37FFCP PHASE2:Hg19::chr19:28198009..28198037,-#_53d1f4b52522e8c1638c7ca24c7536aap@chr19:28198009..28198037, -
6.8e-37FFCP PHASE1:Hg19::chr1:105493789..105493826,-#_53d1f4b52522e8c1638c7ca24c7536aap@chr1:105493789..105493826, -
6.8e-37FFCP PHASE2:Hg19::chr4:188536806..188536817,-#_53d1f4b52522e8c1638c7ca24c7536aap@chr4:188536806..188536817, -
6.8e-37FFCP PHASE2:Hg19::chr11:85416548..85416560,-#_53d1f4b52522e8c1638c7ca24c7536aap18@SYTL2
6.8e-37FFCP PHASE1:Hg19::chr1:21912937..21912944,+#_53d1f4b52522e8c1638c7ca24c7536aap2@ENST00000457706
6.8e-37FFCP PHASE1:Hg19::chr19:28260754..28260759,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr19:28260754..28260759, +
6.8e-37FFCP PHASE1:Hg19::chr4:188536806..188536817,-#_53d1f4b52522e8c1638c7ca24c7536aap@chr4:188536806..188536817, -
6.8e-37FFCP PHASE2:Hg19::chr9:29942099..29942136,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr9:29942099..29942136, +
6.8e-37FFCP PHASE2:Hg19::chr2:71791188..71791195,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr2:71791188..71791195, +
6.8e-37FFCP PHASE1:Hg19::chrX:58230080..58230084,-#_53d1f4b52522e8c1638c7ca24c7536aap@chrX:58230080..58230084, -
6.8e-37FFCP PHASE1:Hg19::chr19:28198123..28198149,+#_53d1f4b52522e8c1638c7ca24c7536aap@chr19:28198123..28198149, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000375&oldid=1837007"