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Revision as of 13:03, 27 June 2012

Name:endothelial cell of sinusoid
Namespace:cell
Definition:"An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256]
Xrefs:
links:
FMA:63134
Alt_id: CL:1000403
Created by:tmeehan
Creation date:2010-09-14T10:57:26Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000115(endothelial cell)
part_of:UBERON:0003909(sinusoid)



Children


is a:CL:1000398 (endothelial cell of hepatic sinusoid)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002262 (endothelial cell of sinusoid), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.99e-131FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_39a14e872ad16e53a4584126632e1c9fp2@ENST00000448698
8.99e-131FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_39a14e872ad16e53a4584126632e1c9fp2@ENST00000448698
3.07e-86FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:39513150..39513152, +
3.07e-86FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35093616..35093631, -
3.07e-86FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_f7085926695310bcdd36d5f7658fb7b6p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE1:Mm9::chr5:124112234..124112240,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE2:Mm9::chr15:82207617..82207621,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:82207617..82207621, +
3.07e-86FFCP PHASE1:Mm9::chr11:107196799..107196814,+#_f7085926695310bcdd36d5f7658fb7b6p@chr11:107196799..107196814, +
3.07e-86FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE1:Mm9::chr15:82207617..82207621,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:82207617..82207621, +
3.07e-86FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:54785454..54785456, -
3.07e-86FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35106749..35106752, -
3.07e-86FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_f7085926695310bcdd36d5f7658fb7b6p@chr2:169549462..169549477, +
3.07e-86FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE1:Mm9::chr4:137487112..137487117,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE2:Mm9::chr8:111108947..111108951,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:111108947..111108951, +
3.07e-86FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr13:5840965..5840966,+#_f7085926695310bcdd36d5f7658fb7b6p@chr13:5840965..5840966, +
3.07e-86FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_f7085926695310bcdd36d5f7658fb7b6p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE1:Mm9::chr13:96429602..96429605,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:96429602..96429605, -
3.07e-86FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_f7085926695310bcdd36d5f7658fb7b6p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_f7085926695310bcdd36d5f7658fb7b6p@chr3:104857794..104857802, -
3.07e-86FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:91441074..91441080, -
3.07e-86FFCP PHASE1:Mm9::chr16:85547242..85547252,+#_f7085926695310bcdd36d5f7658fb7b6p@chr16:85547242..85547252, +
3.07e-86FFCP PHASE1:Mm9::chr15:59435855..59435878,-#_f7085926695310bcdd36d5f7658fb7b6p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE1:Mm9::chr8:25530071..25530072,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE1:Mm9::chr9:42915185..42915192,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE1:Mm9::chr18:47491114..47491123,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:47491114..47491123, +
3.07e-86FFCP PHASE2:Mm9::chr11:48685851..48685860,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:48685851..48685860, -
3.07e-86FFCP PHASE1:Mm9::chr10:93499468..93499494,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_f7085926695310bcdd36d5f7658fb7b6p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_f7085926695310bcdd36d5f7658fb7b6p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_f7085926695310bcdd36d5f7658fb7b6p@chr3:104857794..104857802, -
3.07e-86FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:48685851..48685860, -
3.07e-86FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:85585991..85586025, -
3.07e-86FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:34796428..34796430, -
3.07e-86FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_f7085926695310bcdd36d5f7658fb7b6p@chr7:52781901..52781904, +
3.07e-86FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:186559285..186559288, +
3.07e-86FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:85585949..85585969, -
3.07e-86FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_f7085926695310bcdd36d5f7658fb7b6p@chr8:114250006..114250039, -
3.07e-86FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_f7085926695310bcdd36d5f7658fb7b6p@chr3:121593688..121593695, +
3.07e-86FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_f7085926695310bcdd36d5f7658fb7b6p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE2:Mm9::chr18:44793802..44793835,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:44793802..44793835, +
3.07e-86FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_f7085926695310bcdd36d5f7658fb7b6p6@Adamts1
3.07e-86FFCP PHASE2:Mm9::chr18:38831400..38831402,-#_f7085926695310bcdd36d5f7658fb7b6p@chr18:38831400..38831402, -
3.07e-86FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_f7085926695310bcdd36d5f7658fb7b6p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_f7085926695310bcdd36d5f7658fb7b6p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_f7085926695310bcdd36d5f7658fb7b6p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE2:Mm9::chr18:35881716..35881727,-#_f7085926695310bcdd36d5f7658fb7b6p@chr18:35881716..35881727, -
3.07e-86FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_f7085926695310bcdd36d5f7658fb7b6p@chr2:84756280..84756286, +
3.07e-86FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_f7085926695310bcdd36d5f7658fb7b6p@chr11:115280630..115280662, +
3.07e-86FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:12388232..12388237, +
3.07e-86FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:28107053..28107062, -
3.07e-86FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_f7085926695310bcdd36d5f7658fb7b6p4@Pag1
3.07e-86FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_f7085926695310bcdd36d5f7658fb7b6p8@Map3k8
3.07e-86FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_f7085926695310bcdd36d5f7658fb7b6p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr16:28911901..28911906,-#_f7085926695310bcdd36d5f7658fb7b6p@chr16:28911901..28911906, -
3.07e-86FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_f7085926695310bcdd36d5f7658fb7b6p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE2:Mm9::chr16:30944451..30944485,+#_f7085926695310bcdd36d5f7658fb7b6p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:82209805..82209851, +
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:82209805..82209851, +
3.07e-86FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_f7085926695310bcdd36d5f7658fb7b6p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_f7085926695310bcdd36d5f7658fb7b6p4@Gm4262
3.07e-86FFCP PHASE1:Mm9::chr8:89310639..89310641,-#_f7085926695310bcdd36d5f7658fb7b6p@chr8:89310639..89310641, -
3.07e-86FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:111108947..111108951, +
3.07e-86FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_f7085926695310bcdd36d5f7658fb7b6p4@Gm4262
3.07e-86FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:109223779..109223789, -
3.07e-86FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:34549876..34549892, -
3.07e-86FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:35900327..35900366, +
3.07e-86FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_f7085926695310bcdd36d5f7658fb7b6p@chr15:32178407..32178408, -
3.07e-86FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_f7085926695310bcdd36d5f7658fb7b6p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE2:Mm9::chr17:48822294..48822295,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr17:28107053..28107062,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:28107053..28107062, -
3.07e-86FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_f7085926695310bcdd36d5f7658fb7b6p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:5125608..5125613, +
3.07e-86FFCP PHASE2:Mm9::chr2:133323630..133323631,+#_f7085926695310bcdd36d5f7658fb7b6p@chr2:133323630..133323631, +
3.07e-86FFCP PHASE1:Mm9::chr16:85801525..85801529,-#_f7085926695310bcdd36d5f7658fb7b6p6@Adamts1
3.07e-86FFCP PHASE2:Mm9::chr8:114123814..114123821,-#_f7085926695310bcdd36d5f7658fb7b6p@chr8:114123814..114123821, -
3.07e-86FFCP PHASE2:Mm9::chr12:86691575..86691580,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:86691575..86691580, -

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