CL:0002432: Difference between revisions
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|develops_from= | |develops_from=CL:0002433 | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
Revision as of 13:04, 27 June 2012
| Name: | CD24-positive, CD4 single-positive thymocyte |
|---|---|
| Namespace: | cell;;efo |
| Definition: | "A CD4-positive, CD8-negative thymocyte that is CD24-positive and expresses high levels of the alpha-beta T cell receptor." [GOC:tfm, http://www.immgen.org/index_content.html] |
| Synonyms: |
"CD24-positive, CD4 single-positive semimature thymocyte" EXACT [] "T.4SP24int.Th" EXACT [] |
| Comments: | Described in the immgene database as being CD24-intermediate. |
| Created by: | tmeehan |
| Creation date: | 2010-10-21T02:43:52Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000810(CD4-positive, alpha-beta thymocyte) |
|---|---|
| develops_from: | CL:0002433(CD69-positive, CD4-positive single-positive thymocyte) |
Children
| develops from: | CL:0002436 (mature CD4 single-positive thymocyte) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002432 (CD24-positive, CD4 single-positive thymocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:162762361..162762364,+#_8b9216f287d9ae16caf318fca0da76ef | p@chr2:162762361..162762364, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr1:183622379..183622388,-#_8b9216f287d9ae16caf318fca0da76ef | p4@APOBEC4 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr1:183622379..183622388,-#_8b9216f287d9ae16caf318fca0da76ef | p4@APOBEC4 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:162762361..162762364,+#_8b9216f287d9ae16caf318fca0da76ef | p@chr2:162762361..162762364, + |
| 1.36e-86 | FFCP PHASE2:Mm9::chr13:30878406..30878419,+#_edd105fca4446572439cec89cd861450 | p@chr13:30878406..30878419, + |
| 1.36e-86 | FFCP PHASE2:Mm9::chrX:54476786..54476810,+#_edd105fca4446572439cec89cd861450 | p@chrX:54476786..54476810, + |
| 1.36e-86 | FFCP PHASE1:Mm9::chr13:30878406..30878419,+#_edd105fca4446572439cec89cd861450 | p@chr13:30878406..30878419, + |
| 1.36e-86 | FFCP PHASE1:Mm9::chrX:54476786..54476810,+#_edd105fca4446572439cec89cd861450 | p@chrX:54476786..54476810, + |
| 1.01e-74 | FFCP PHASE1:Mm9::chr16:52032670..52032685,+#_6985fcf778f87a8a4c688153821fb99f | p@chr16:52032670..52032685, + |
| 1.01e-74 | FFCP PHASE2:Mm9::chr16:52032670..52032685,+#_6985fcf778f87a8a4c688153821fb99f | p@chr16:52032670..52032685, + |
| 2.41e-74 | FFCP PHASE2:Mm9::chr16:93777453..93777464,+#_fd1bda01ec75eb93832e3c46840940ea | p@chr16:93777453..93777464, + |
| 2.41e-74 | FFCP PHASE2:Mm9::chr14:54795946..54795960,+#_fd1bda01ec75eb93832e3c46840940ea | p1@ENSMUST00000103701 |
| 2.41e-74 | FFCP PHASE1:Mm9::chr14:54795946..54795960,+#_fd1bda01ec75eb93832e3c46840940ea | p1@ENSMUST00000103701 |
| 2.41e-74 | FFCP PHASE1:Mm9::chr16:93777453..93777464,+#_fd1bda01ec75eb93832e3c46840940ea | p@chr16:93777453..93777464, + |
| 2.48e-72 | FFCP PHASE2:Mm9::chr13:30853488..30853499,+#_059b98a511095131c5848959162cd533 | p@chr13:30853488..30853499, + |
| 2.48e-72 | FFCP PHASE1:Mm9::chr14:122362270..122362291,-#_059b98a511095131c5848959162cd533 | p@chr14:122362270..122362291, - |
| 2.48e-72 | FFCP PHASE2:Mm9::chr11:11592840..11592849,+#_059b98a511095131c5848959162cd533 | p@chr11:11592840..11592849, + |
| 2.48e-72 | FFCP PHASE1:Mm9::chr11:11587720..11587735,+#_059b98a511095131c5848959162cd533 | p@chr11:11587720..11587735, + |
| 2.48e-72 | FFCP PHASE1:Mm9::chr15:80403112..80403122,+#_059b98a511095131c5848959162cd533 | p12@Grap2 |
| 2.48e-72 | FFCP PHASE1:Mm9::chr11:11592840..11592849,+#_059b98a511095131c5848959162cd533 | p@chr11:11592840..11592849, + |
| 2.48e-72 | FFCP PHASE2:Mm9::chr15:80403112..80403122,+#_059b98a511095131c5848959162cd533 | p12@Grap2 |
| 2.48e-72 | FFCP PHASE1:Mm9::chr14:54827490..54827502,+#_059b98a511095131c5848959162cd533 | p@chr14:54827490..54827502, + |
| 2.48e-72 | FFCP PHASE2:Mm9::chr14:122362270..122362291,-#_059b98a511095131c5848959162cd533 | p@chr14:122362270..122362291, - |
| 2.48e-72 | FFCP PHASE2:Mm9::chr14:54827490..54827502,+#_059b98a511095131c5848959162cd533 | p@chr14:54827490..54827502, + |
| 2.48e-72 | FFCP PHASE1:Mm9::chr13:30853488..30853499,+#_059b98a511095131c5848959162cd533 | p@chr13:30853488..30853499, + |
| 2.48e-72 | FFCP PHASE2:Mm9::chr11:11587720..11587735,+#_059b98a511095131c5848959162cd533 | p@chr11:11587720..11587735, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr9:75772924..75772957,+#_9a81cdf323aecbc08781d9547a53bd44 | p17@ANXA1 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr9:75772924..75772957,+#_9a81cdf323aecbc08781d9547a53bd44 | p17@ANXA1 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr20:37493438..37493456,-#_7ea8c3bee702d073a5e6bc73ca99496b | p@chr20:37493438..37493456, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr20:37493438..37493456,-#_7ea8c3bee702d073a5e6bc73ca99496b | p@chr20:37493438..37493456, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr11:118209514..118209525,+#_7ea8c3bee702d073a5e6bc73ca99496b | p@chr11:118209514..118209525, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:204816181..204816219,-#_7ea8c3bee702d073a5e6bc73ca99496b | p@chr2:204816181..204816219, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:204816181..204816219,-#_7ea8c3bee702d073a5e6bc73ca99496b | p@chr2:204816181..204816219, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr11:118209514..118209525,+#_7ea8c3bee702d073a5e6bc73ca99496b | p@chr11:118209514..118209525, + |
| 1.05e-65 | FFCP PHASE1:Mm9::chr14:53242248..53242261,+#_8edd4fb6a56c5e8147903738a5dec7da | p@chr14:53242248..53242261, + |
| 1.05e-65 | FFCP PHASE2:Mm9::chr14:53242248..53242261,+#_8edd4fb6a56c5e8147903738a5dec7da | p@chr14:53242248..53242261, + |
| 1.74e-65 | FFCP PHASE1:Mm9::chr5:123439274..123439290,+#_4eac811c5e035f22e6874041cf59ad63 | p4@ENSMUST00000148466, p4@uc008zmw.1 |
| 1.74e-65 | FFCP PHASE2:Mm9::chr5:123439274..123439290,+#_4eac811c5e035f22e6874041cf59ad63 | p4@ENSMUST00000148466, p4@uc008zmw.1 |
| 2.25e-65 | FFCP PHASE1:Mm9::chr15:80403104..80403111,+#_df5be0fb771e3c380e33fe5b6715f7fd | p10@Grap2 |
| 2.25e-65 | FFCP PHASE1:Mm9::chr5:123465978..123465989,-#_df5be0fb771e3c380e33fe5b6715f7fd | p@chr5:123465978..123465989, - |
| 2.25e-65 | FFCP PHASE2:Mm9::chr5:123465978..123465989,-#_df5be0fb771e3c380e33fe5b6715f7fd | p@chr5:123465978..123465989, - |
| 2.25e-65 | FFCP PHASE2:Mm9::chr15:80403104..80403111,+#_df5be0fb771e3c380e33fe5b6715f7fd | p10@Grap2 |
| 2.25e-65 | FFCP PHASE1:Mm9::chr1:140069290..140069308,+#_df5be0fb771e3c380e33fe5b6715f7fd | p@chr1:140069290..140069308, + |
| 2.25e-65 | FFCP PHASE2:Mm9::chr1:140069290..140069308,+#_df5be0fb771e3c380e33fe5b6715f7fd | p@chr1:140069290..140069308, + |
| 2.9e-65 | FFCP PHASE2:Mm9::chr11:46200242..46200255,+#_d67395dacc164a39b05b2dccae661e42 | p@chr11:46200242..46200255, + |
| 2.9e-65 | FFCP PHASE1:Mm9::chr11:46200242..46200255,+#_d67395dacc164a39b05b2dccae661e42 | p@chr11:46200242..46200255, + |
| 2.9e-65 | FFCP PHASE1:Mm9::chr6:41504409..41504422,-#_d67395dacc164a39b05b2dccae661e42 | p@chr6:41504409..41504422, - |
| 2.9e-65 | FFCP PHASE2:Mm9::chr14:54817583..54817593,-#_d67395dacc164a39b05b2dccae661e42 | p@chr14:54817583..54817593, - |
| 2.9e-65 | FFCP PHASE1:Mm9::chr14:54817583..54817593,-#_d67395dacc164a39b05b2dccae661e42 | p@chr14:54817583..54817593, - |
| 2.9e-65 | FFCP PHASE2:Mm9::chr6:41504409..41504422,-#_d67395dacc164a39b05b2dccae661e42 | p@chr6:41504409..41504422, - |
| 3.74e-65 | FFCP PHASE2:Mm9::chr4:32328217..32328228,-#_d0422a2efc2ffc2dae6ca3fcc45f68a5 | p@chr4:32328217..32328228, - |
| 3.74e-65 | FFCP PHASE1:Mm9::chr4:32328217..32328228,-#_d0422a2efc2ffc2dae6ca3fcc45f68a5 | p@chr4:32328217..32328228, - |
| 6.21e-65 | FFCP PHASE1:Mm9::chr5:123465955..123465966,-#_c9021d28cf7c0d417e94b05c907492cd | p@chr5:123465955..123465966, - |
| 6.21e-65 | FFCP PHASE2:Mm9::chr13:105412781..105412798,+#_c9021d28cf7c0d417e94b05c907492cd | p@chr13:105412781..105412798, + |
| 6.21e-65 | FFCP PHASE1:Mm9::chr11:46200110..46200124,-#_c9021d28cf7c0d417e94b05c907492cd | p@chr11:46200110..46200124, - |
| 6.21e-65 | FFCP PHASE1:Mm9::chr13:105412781..105412798,+#_c9021d28cf7c0d417e94b05c907492cd | p@chr13:105412781..105412798, + |
| 6.21e-65 | FFCP PHASE2:Mm9::chr5:123465955..123465966,-#_c9021d28cf7c0d417e94b05c907492cd | p@chr5:123465955..123465966, - |
| 6.21e-65 | FFCP PHASE2:Mm9::chr11:46200110..46200124,-#_c9021d28cf7c0d417e94b05c907492cd | p@chr11:46200110..46200124, - |
| 1.0e-60 | FFCP PHASE1:Mm9::chr2:11097490..11097500,+#_a734ae7b5204b2a4fb6712376d05e1bb | p@chr2:11097490..11097500, + |
| 1.0e-60 | FFCP PHASE2:Mm9::chr2:11097490..11097500,+#_a734ae7b5204b2a4fb6712376d05e1bb | p@chr2:11097490..11097500, + |
| 1.33e-60 | FFCP PHASE1:Mm9::chr10:128157769..128157772,-#_4aaadb56cfe4507cd800f94adce5c9b4 | p@chr10:128157769..128157772, - |
| 1.33e-60 | FFCP PHASE2:Mm9::chr5:108160486..108160515,-#_4aaadb56cfe4507cd800f94adce5c9b4 | p@chr5:108160486..108160515, - |
| 1.33e-60 | FFCP PHASE1:Mm9::chr7:150943007..150943022,+#_4aaadb56cfe4507cd800f94adce5c9b4 | p@chr7:150943007..150943022, + |
| 1.33e-60 | FFCP PHASE2:Mm9::chr12:70398221..70398232,-#_4aaadb56cfe4507cd800f94adce5c9b4 | p@chr12:70398221..70398232, - |
| 1.33e-60 | FFCP PHASE2:Mm9::chr7:150943007..150943022,+#_4aaadb56cfe4507cd800f94adce5c9b4 | p@chr7:150943007..150943022, + |
| 1.33e-60 | FFCP PHASE1:Mm9::chr5:108160486..108160515,-#_4aaadb56cfe4507cd800f94adce5c9b4 | p@chr5:108160486..108160515, - |
| 1.33e-60 | FFCP PHASE1:Mm9::chr12:70398221..70398232,-#_4aaadb56cfe4507cd800f94adce5c9b4 | p@chr12:70398221..70398232, - |
| 1.33e-60 | FFCP PHASE2:Mm9::chr10:128157769..128157772,-#_4aaadb56cfe4507cd800f94adce5c9b4 | p@chr10:128157769..128157772, - |
| 1.77e-60 | FFCP PHASE1:Mm9::chr14:53414758..53414769,+#_1f8f644b8609084730aba78ce49e3b93 | p1@ENSMUST00000103582 |
| 1.77e-60 | FFCP PHASE2:Mm9::chr14:53414758..53414769,+#_1f8f644b8609084730aba78ce49e3b93 | p1@ENSMUST00000103582 |
| 2.34e-60 | FFCP PHASE2:Mm9::chr2:73290853..73290866,+#_ae28431bce7db9f03da0ddec4900cb77 | p@chr2:73290853..73290866, + |
| 2.34e-60 | FFCP PHASE1:Mm9::chr2:73290853..73290866,+#_ae28431bce7db9f03da0ddec4900cb77 | p@chr2:73290853..73290866, + |
| 4.1e-60 | FFCP PHASE2:Mm9::chr2:11181142..11181148,-#_a5366871066c9d4c04b1968780e5d443 | p@chr2:11181142..11181148, - |
| 4.1e-60 | FFCP PHASE1:Mm9::chr2:11181142..11181148,-#_a5366871066c9d4c04b1968780e5d443 | p@chr2:11181142..11181148, - |
| 4.1e-60 | FFCP PHASE2:Mm9::chr1:138476217..138476228,+#_a5366871066c9d4c04b1968780e5d443 | p@chr1:138476217..138476228, + |
| 4.1e-60 | FFCP PHASE2:Mm9::chr9:14708434..14708444,-#_a5366871066c9d4c04b1968780e5d443 | p8@Folr4 |
| 4.1e-60 | FFCP PHASE1:Mm9::chr9:14708434..14708444,-#_a5366871066c9d4c04b1968780e5d443 | p8@Folr4 |
| 4.1e-60 | FFCP PHASE1:Mm9::chr1:138476217..138476228,+#_a5366871066c9d4c04b1968780e5d443 | p@chr1:138476217..138476228, + |
| 6.9e-59 | FFCP PHASE2:Mm9::chrX:54477240..54477286,+#_01cf4161e86d706bdd48acc555beace5 | p@chrX:54477240..54477286, + |
| 6.9e-59 | FFCP PHASE1:Mm9::chr11:87558695..87558707,+#_01cf4161e86d706bdd48acc555beace5 | p@chr11:87558695..87558707, + |
| 6.9e-59 | FFCP PHASE1:Mm9::chrX:54465221..54465232,+#_01cf4161e86d706bdd48acc555beace5 | p4@Cd40lg |
| 6.9e-59 | FFCP PHASE1:Mm9::chrX:54477240..54477286,+#_01cf4161e86d706bdd48acc555beace5 | p@chrX:54477240..54477286, + |
| 6.9e-59 | FFCP PHASE2:Mm9::chr11:87558695..87558707,+#_01cf4161e86d706bdd48acc555beace5 | p@chr11:87558695..87558707, + |
| 6.9e-59 | FFCP PHASE2:Mm9::chrX:54465221..54465232,+#_01cf4161e86d706bdd48acc555beace5 | p4@Cd40lg |
| 1.09e-58 | FFCP PHASE1:Mm9::chr4:32339235..32339263,+#_ff2dc3d1aa9b41b139d36883f548b90e | p@chr4:32339235..32339263, + |
| 1.09e-58 | FFCP PHASE2:Mm9::chr4:32339235..32339263,+#_ff2dc3d1aa9b41b139d36883f548b90e | p@chr4:32339235..32339263, + |
| 1.71e-58 | FFCP PHASE1:Mm9::chr16:23175296..23175310,+#_b2bb048847c0143204bc5bb7da088893 | p3@uc007ytl.1 |
| 1.71e-58 | FFCP PHASE1:Mm9::chr19:10904395..10904400,-#_b2bb048847c0143204bc5bb7da088893 | p5@Cd6 |
| 1.71e-58 | FFCP PHASE2:Mm9::chr19:10904395..10904400,-#_b2bb048847c0143204bc5bb7da088893 | p5@Cd6 |
| 1.71e-58 | FFCP PHASE2:Mm9::chr16:23175296..23175310,+#_b2bb048847c0143204bc5bb7da088893 | p3@uc007ytl.1 |
| 2.15e-58 | FFCP PHASE1:Mm9::chr14:54831123..54831141,+#_029cea7931789ccd3137d05f92f75c11 | p1@ENSMUST00000103733 |
| 2.15e-58 | FFCP PHASE2:Mm9::chr14:54831123..54831141,+#_029cea7931789ccd3137d05f92f75c11 | p1@ENSMUST00000103733 |
| 2.69e-58 | FFCP PHASE2:Mm9::chr4:32339511..32339518,+#_421f2ccb8d30e8551eedf2dc2ab6a889 | p@chr4:32339511..32339518, + |
| 2.69e-58 | FFCP PHASE1:Mm9::chr4:32339511..32339518,+#_421f2ccb8d30e8551eedf2dc2ab6a889 | p@chr4:32339511..32339518, + |
| 2.69e-58 | FFCP PHASE2:Mm9::chr4:151490126..151490137,+#_421f2ccb8d30e8551eedf2dc2ab6a889 | p3@Tnfrsf25 |
| 2.69e-58 | FFCP PHASE1:Mm9::chr4:151490126..151490137,+#_421f2ccb8d30e8551eedf2dc2ab6a889 | p3@Tnfrsf25 |
| 3.38e-58 | FFCP PHASE1:Mm9::chr6:48656532..48656548,+#_1cf518f4f2c7a26e7ba4b0939d4e90c6 | p@chr6:48656532..48656548, + |
| 3.38e-58 | FFCP PHASE2:Mm9::chr6:48656532..48656548,+#_1cf518f4f2c7a26e7ba4b0939d4e90c6 | p@chr6:48656532..48656548, + |
| 3.91e-58 | FFCP PHASE1:Mm9::chr1:140038899..140038910,-#_a78a578b61b90fc086fa648dc287f2f3 | p@chr1:140038899..140038910, - |
| 3.91e-58 | FFCP PHASE1:Mm9::chr1:140063347..140063359,+#_a78a578b61b90fc086fa648dc287f2f3 | p@chr1:140063347..140063359, + |
