UBERON:0000383: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:BTO_0001485-FMA_72954 | ||
| | |anatomical_img_id=FMA:72954 | ||
|comment=AO notes: we place the MA term musculature here, rather than under uberon:musculature, as this seems more appropriate given the structure of MA | |comment=AO notes: we place the MA term musculature here, rather than under uberon:musculature, as this seems more appropriate given the structure of MA | ||
|created_by= | |created_by= | ||
| | |def="Anatomical system that consists of all the muscles of the body[VSAO, modified]." [VSAO:0000033] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0000383 | |||
|is_a=UBERON:0000467 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=musculature of body | |||
|namespace= | |||
|obo_creation_date= | |||
|part_of=UBERON:0002204 | |part_of=UBERON:0002204 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;RO:0002161 NCBITaxon:6040;;UBPROP:0000001 "Anatomical system that consists of the muscles of the body.[VSAO]" xsd:string | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;RO:0002161 NCBITaxon:6040;;UBPROP:0000001 "Anatomical system that consists of the muscles of the body.[VSAO]" xsd:string | ||
| | |subset= | ||
| | |synonym="muscle system" EXACT [];;"muscle system of body" EXACT [];;"muscular system" EXACT [FMA:72954];;"musculature system" EXACT [BILA:0000088];;"muskelsystem" RELATED [BTO:0001485];;"set of all muscles" EXACT [FMA:72954];;"Set of muscles of body" EXACT [FMA:72954];;"vertebrate muscular system" EXACT [BTO:0001369] | ||
|union_of= | |||
|xref=AAO:0000307;;BILA:0000088;;BTO:0001369;;BTO:0001485;;EFO:0000801;;FBbt:00005069;;FMA:72954;;MA:0002888;;MAT:0000025;;MIAA:0000025;;VSAO:0000033;;XAO:0004042 | |||
}} | }} | ||
Revision as of 18:36, 29 November 2012
| Name: | musculature of body | ||
|---|---|---|---|
| Definition: | "Anatomical system that consists of all the muscles of the body[VSAO, modified]." [VSAO:0000033] | ||
| Xrefs: |
| ||
| Synonyms: |
"muscle system" EXACT [] "muscle system of body" EXACT [] "muscular system" EXACT [FMA:72954] "musculature system" EXACT [BILA:0000088] "muskelsystem" RELATED [BTO:0001485] "set of all muscles" EXACT [FMA:72954] "Set of muscles of body" EXACT [FMA:72954] "vertebrate muscular system" EXACT [BTO:0001369] | ||
| Comments: | AO notes: we place the MA term musculature here, rather than under uberon:musculature, as this seems more appropriate given the structure of MA | ||
| Alt_id: | UBERON:BTO_0001485-FMA_72954 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000467(anatomical system) |
|---|---|
| part_of: | UBERON:0002204(musculoskeletal system) |
Children
| part of: | UBERON:0001015 (musculature),UBERON:0018254 (skeletal musculature) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10023-101D5 (skeletal muscle, adult, pool1)
- 10024-101D6 (small intestine, adult, pool1)
- 10048-101G3 (smooth muscle, adult, pool1)
- 10066-101I3 (skeletal muscle, fetal, donor1)
- 10069-101I6 (diaphragm, fetal, donor1)
- 10094-102C4
- 10264-104D3
- 10269-104D8
- 10270-104D9
- 10271-104E1
... further results Mouse (Mus musculus)
- 10023-101D5 (skeletal muscle, adult, pool1)
- 10024-101D6 (small intestine, adult, pool1)
- 10048-101G3 (smooth muscle, adult, pool1)
- 10066-101I3 (skeletal muscle, fetal, donor1)
- 10069-101I6 (diaphragm, fetal, donor1)
- 10094-102C4
- 10264-104D3
- 10269-104D8
- 10270-104D9
- 10271-104E1
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000383 (musculature of body), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.77e-52 | FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_02faa6ef25ad93a7a1fd81c4198bdf2c | p@chrX:160838683..160838694, + |
| 2.77e-52 | FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_02faa6ef25ad93a7a1fd81c4198bdf2c | p@chrX:160838683..160838694, + |
| 1.23e-45 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_2cad7a5cac4fe82662f0c7cdcdc94ddd | p@chr6:53359400..53359406, + |
| 1.23e-45 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_2cad7a5cac4fe82662f0c7cdcdc94ddd | p@chr6:53359400..53359406, + |
| 4.52e-45 | FFCP PHASE1:Mm9::chr12:105433069..105433075,-#_c7999e9d9e98ea3f2e13faf3d5f32c18 | p@chr12:105433069..105433075, - |
| 4.52e-45 | FFCP PHASE1:Mm9::chrX:65748600..65748616,+#_c7999e9d9e98ea3f2e13faf3d5f32c18 | p@chrX:65748600..65748616, + |
| 4.52e-45 | FFCP PHASE2:Mm9::chrX:65748600..65748616,+#_c7999e9d9e98ea3f2e13faf3d5f32c18 | p@chrX:65748600..65748616, + |
| 4.52e-45 | FFCP PHASE2:Mm9::chr12:105433069..105433075,-#_c7999e9d9e98ea3f2e13faf3d5f32c18 | p@chr12:105433069..105433075, - |
| 8.43e-44 | FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_dd25f4d0f1b483d744d5033043bfa1af | p@chrX:160838787..160838800, + |
| 8.43e-44 | FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_dd25f4d0f1b483d744d5033043bfa1af | p@chrX:160838787..160838800, + |
| 1.85e-39 | FFCP PHASE2:Mm9::chr11:81849982..81850000,+#_252892f8442ffd921f494a383ac5ee22 | p@chr11:81849982..81850000, + |
| 1.85e-39 | FFCP PHASE1:Mm9::chr11:81849982..81850000,+#_252892f8442ffd921f494a383ac5ee22 | p@chr11:81849982..81850000, + |
| 4.49e-37 | FFCP PHASE2:Hg19::chr7:102553470..102553487,+#_198f05ae8eef77baf914eaf089df204a | p2@LRRC17 |
| 4.49e-37 | FFCP PHASE1:Hg19::chr7:102553470..102553487,+#_198f05ae8eef77baf914eaf089df204a | p2@LRRC17 |
| 7.76e-37 | FFCP PHASE1:Hg19::chr9:35685631..35685657,+#_45796e117a7673fe498afd2e83c8cec9 | p@chr9:35685631..35685657, + |
| 7.76e-37 | FFCP PHASE2:Hg19::chr9:35685631..35685657,+#_45796e117a7673fe498afd2e83c8cec9 | p@chr9:35685631..35685657, + |
| 1.13e-36 | FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_c4af572aa1ace477db8c10a74f664626 | p@chr17:14813242..14813246, - |
| 1.13e-36 | FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_c4af572aa1ace477db8c10a74f664626 | p@chr17:14813242..14813246, - |
| 1.55e-35 | FFCP PHASE1:Hg19::chr10:49813077..49813087,-#_92bc6e2b09fa031f2d000a000beb3d34 | p8@ARHGAP22 |
| 1.55e-35 | FFCP PHASE2:Hg19::chr10:49813077..49813087,-#_92bc6e2b09fa031f2d000a000beb3d34 | p8@ARHGAP22 |
| 2.37e-35 | FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_54e869c91a505e36eefed68c16e03540 | p@chrX:160840048..160840057, + |
| 2.37e-35 | FFCP PHASE1:Mm9::chrX:160823859..160823870,+#_54e869c91a505e36eefed68c16e03540 | p@chrX:160823859..160823870, + |
| 2.37e-35 | FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_54e869c91a505e36eefed68c16e03540 | p@chrX:160840025..160840037, + |
| 2.37e-35 | FFCP PHASE2:Mm9::chrX:160823859..160823870,+#_54e869c91a505e36eefed68c16e03540 | p@chrX:160823859..160823870, + |
| 2.37e-35 | FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_54e869c91a505e36eefed68c16e03540 | p@chrX:160840025..160840037, + |
| 2.37e-35 | FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_54e869c91a505e36eefed68c16e03540 | p@chrX:160840048..160840057, + |
| 2.88e-35 | FFCP PHASE1:Mm9::chr1:127573795..127573810,+#_372731c28b8249fa25c193e1e143d882 | p4@Gpr39 |
| 2.88e-35 | FFCP PHASE2:Mm9::chr1:127573795..127573810,+#_372731c28b8249fa25c193e1e143d882 | p4@Gpr39 |
| 2.4e-34 | FFCP PHASE2:Hg19::chr10:49813051..49813064,-#_f0d499537b6813e28d0f6dcf82019bbe | p4@ARHGAP22 |
| 2.4e-34 | FFCP PHASE1:Hg19::chr10:49813051..49813064,-#_f0d499537b6813e28d0f6dcf82019bbe | p4@ARHGAP22 |
| 4.34e-34 | FFCP PHASE2:Hg19::chr7:102553430..102553456,+#_ce66297b235c1023564be4a6ec728937 | p1@LRRC17 |
| 4.34e-34 | FFCP PHASE1:Hg19::chr7:102553430..102553456,+#_ce66297b235c1023564be4a6ec728937 | p1@LRRC17 |
| 1.01e-33 | FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_961d047c16d564642778daea354e4143 | p@chr11:102661517..102661541, - |
| 1.01e-33 | FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_961d047c16d564642778daea354e4143 | p@chr11:102661517..102661541, - |
| 3.36e-33 | FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_191b46083c81ed3c1c353ecf8b53c29a | p@chr4:74703497..74703511, + |
| 3.36e-33 | FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_191b46083c81ed3c1c353ecf8b53c29a | p@chr4:74703497..74703511, + |
| 9.96e-33 | FFCP PHASE1:Hg19::chr9:35684475..35684520,+#_a05d58b1d394876b6fb5d4c5c2b99677 | p@chr9:35684475..35684520, + |
| 9.96e-33 | FFCP PHASE2:Hg19::chr9:35684475..35684520,+#_a05d58b1d394876b6fb5d4c5c2b99677 | p@chr9:35684475..35684520, + |
| 1.11e-32 | FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_5de766c051c714b3aec913c100253151 | p@chr4:7846444..7846449, - |
| 1.11e-32 | FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_5de766c051c714b3aec913c100253151 | p@chr4:7846444..7846449, - |
| 1.38e-32 | FFCP PHASE1:Hg19::chr9:35689148..35689192,+#_97dddb2f76eb2ed5fe9171fdd6c0ec59 | p@chr9:35689148..35689192, + |
| 1.38e-32 | FFCP PHASE2:Hg19::chr9:35689148..35689192,+#_97dddb2f76eb2ed5fe9171fdd6c0ec59 | p@chr9:35689148..35689192, + |
| 6.63e-32 | FFCP PHASE2:Hg19::chr7:102553382..102553397,+#_840eec54a1d613a8415693a177a1c369 | p3@LRRC17 |
| 6.63e-32 | FFCP PHASE1:Hg19::chr7:102553382..102553397,+#_840eec54a1d613a8415693a177a1c369 | p3@LRRC17 |
| 1.03e-31 | FFCP PHASE2:Hg19::chr6:148593425..148593498,+#_7417bc774656f1dc4a3cef29849009ad | p2@SASH1 |
| 1.03e-31 | FFCP PHASE1:Hg19::chr6:148593425..148593498,+#_7417bc774656f1dc4a3cef29849009ad | p2@SASH1 |
| 1.06e-31 | FFCP PHASE1:Mm9::chr1:127574253..127574264,+#_4dcf5a1b08f2d6e6fd93a6a921a9aa31 | p@chr1:127574253..127574264, + |
| 1.06e-31 | FFCP PHASE2:Mm9::chr1:127574253..127574264,+#_4dcf5a1b08f2d6e6fd93a6a921a9aa31 | p@chr1:127574253..127574264, + |
| 1.07e-31 | FFCP PHASE1:Mm9::chr3:79689074..79689090,+#_0b9275ac94f1d5dcab34f013d4087403 | p11@Fam198b |
| 1.07e-31 | FFCP PHASE2:Mm9::chr3:79689074..79689090,+#_0b9275ac94f1d5dcab34f013d4087403 | p11@Fam198b |
| 1.42e-31 | FFCP PHASE2:Mm9::chr1:127573733..127573745,+#_ad49ed6c782c114f6d0452f720483a1b | p7@Gpr39 |
| 1.42e-31 | FFCP PHASE1:Mm9::chr1:127573733..127573745,+#_ad49ed6c782c114f6d0452f720483a1b | p7@Gpr39 |
| 1.64e-31 | FFCP PHASE2:Mm9::chr1:127573690..127573699,+#_050adf0544360a26bfd2e1d2eda1857d | p11@Gpr39 |
| 1.64e-31 | FFCP PHASE1:Mm9::chr1:127573690..127573699,+#_050adf0544360a26bfd2e1d2eda1857d | p11@Gpr39 |
| 1.9e-31 | FFCP PHASE2:Mm9::chrX:160839768..160839780,+#_0057be580d0d74c80b621448675032bc | p@chrX:160839768..160839780, + |
| 1.9e-31 | FFCP PHASE1:Mm9::chrX:160839768..160839780,+#_0057be580d0d74c80b621448675032bc | p@chrX:160839768..160839780, + |
| 2.52e-31 | FFCP PHASE1:Hg19::chr9:35685445..35685517,+#_12f72b025dc228311b39e78c022cc0ee | p@chr9:35685445..35685517, + |
| 2.52e-31 | FFCP PHASE2:Hg19::chr9:35685445..35685517,+#_12f72b025dc228311b39e78c022cc0ee | p@chr9:35685445..35685517, + |
| 2.59e-31 | FFCP PHASE2:Mm9::chrX:65748571..65748595,+#_53a73be20fe7a01255d1bd1c9ceff25b | p@chrX:65748571..65748595, + |
| 2.59e-31 | FFCP PHASE1:Mm9::chrX:65748571..65748595,+#_53a73be20fe7a01255d1bd1c9ceff25b | p@chrX:65748571..65748595, + |
| 3.38e-31 | FFCP PHASE2:Mm9::chr1:127573462..127573472,+#_878cdea0fa36ed4c5f67e28135ffa931 | p8@Gpr39 |
| 3.38e-31 | FFCP PHASE1:Mm9::chr1:127573462..127573472,+#_878cdea0fa36ed4c5f67e28135ffa931 | p8@Gpr39 |
| 4.49e-31 | FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_7b1c90e2954c35208d5641bd8d73df88 | p@chr2:134548872..134548879, - |
| 4.49e-31 | FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_7b1c90e2954c35208d5641bd8d73df88 | p@chr2:134548872..134548879, - |
| 4.6e-31 | FFCP PHASE2:Hg19::chr4:74702338..74702349,+#_a1df5723df1b69c1effdfdb215e6a5cc | p2@CXCL6 |
| 4.6e-31 | FFCP PHASE1:Hg19::chr4:74702338..74702349,+#_a1df5723df1b69c1effdfdb215e6a5cc | p2@CXCL6 |
| 6.22e-31 | FFCP PHASE2:Hg19::chr4:169059590..169059615,+#_9825951304ba223422900a4491ce85a8 | p@chr4:169059590..169059615, + |
| 6.22e-31 | FFCP PHASE1:Hg19::chr4:169059590..169059615,+#_9825951304ba223422900a4491ce85a8 | p@chr4:169059590..169059615, + |
| 1.33e-30 | FFCP PHASE1:Hg19::chr14:96722539..96722555,+#_05237721aacd791abe7dca8523a20550 | p1@BDKRB1 |
| 1.33e-30 | FFCP PHASE2:Hg19::chr14:96722539..96722555,+#_05237721aacd791abe7dca8523a20550 | p1@BDKRB1 |
| 1.34e-30 | FFCP PHASE2:Hg19::chr14:94595800..94595811,-#_860094444000e4766c4c1c01d050348d | p3@IFI27L2 |
| 1.34e-30 | FFCP PHASE1:Hg19::chr14:94595800..94595811,-#_860094444000e4766c4c1c01d050348d | p3@IFI27L2 |
| 1.55e-30 | FFCP PHASE2:Hg19::chr7:93516035..93516056,+#_b84212c2ae08a3e1c1de8ec4c0fadb99 | p1@CU675118 |
| 1.55e-30 | FFCP PHASE1:Hg19::chr7:93516035..93516056,+#_b84212c2ae08a3e1c1de8ec4c0fadb99 | p1@CU675118 |
| 1.72e-30 | FFCP PHASE1:Hg19::chr1:79472477..79472510,-#_5e4f61e98273f36d2e5171168028d066 | p2@ELTD1 |
| 1.72e-30 | FFCP PHASE2:Hg19::chr1:79472477..79472510,-#_5e4f61e98273f36d2e5171168028d066 | p2@ELTD1 |
| 6.51e-30 | FFCP PHASE2:Hg19::chr4:74702666..74702694,+#_4f46d3971e7e7a542285bfc8597ff222 | p3@CXCL6 |
| 6.51e-30 | FFCP PHASE1:Hg19::chr4:74702666..74702694,+#_4f46d3971e7e7a542285bfc8597ff222 | p3@CXCL6 |
| 7.66e-30 | FFCP PHASE1:Hg19::chr9:35685273..35685313,+#_9790b7cd25140a2b0b2ae482556e11e5 | p@chr9:35685273..35685313, + |
| 7.66e-30 | FFCP PHASE2:Hg19::chr9:35685273..35685313,+#_9790b7cd25140a2b0b2ae482556e11e5 | p@chr9:35685273..35685313, + |
| 1.29e-29 | FFCP PHASE2:Hg19::chr9:118916063..118916077,+#_7c32b80b28e32e18df0d72e804ac12bb | p2@PAPPA |
| 1.29e-29 | FFCP PHASE1:Hg19::chr9:118916063..118916077,+#_7c32b80b28e32e18df0d72e804ac12bb | p2@PAPPA |
| 1.73e-29 | FFCP PHASE2:Hg19::chr4:74703963..74703975,+#_fea2e6b905367266139dde7853656201 | p@chr4:74703963..74703975, + |
| 1.73e-29 | FFCP PHASE1:Hg19::chr4:74703963..74703975,+#_fea2e6b905367266139dde7853656201 | p@chr4:74703963..74703975, + |
| 2.82e-29 | FFCP PHASE1:Hg19::chr19:50031567..50031632,+#_1dfbc9bee9aeadc76134396c5c1cef47 | p2@RCN3 |
| 2.82e-29 | FFCP PHASE2:Hg19::chr19:50031567..50031632,+#_1dfbc9bee9aeadc76134396c5c1cef47 | p2@RCN3 |
| 6.38e-29 | FFCP PHASE1:Mm9::chr7:96658543..96658553,-#_5816745a85ca9a757062b89e298b7c08 | p@chr7:96658543..96658553, - |
| 6.38e-29 | FFCP PHASE2:Mm9::chr7:96658543..96658553,-#_5816745a85ca9a757062b89e298b7c08 | p@chr7:96658543..96658553, - |
| 1.16e-28 | FFCP PHASE2:Hg19::chr1:219265603..219265617,-#_107aa8916dafd98af3a8f6e044250d68 | p@chr1:219265603..219265617, - |
| 1.16e-28 | FFCP PHASE1:Hg19::chr1:219265603..219265617,-#_107aa8916dafd98af3a8f6e044250d68 | p@chr1:219265603..219265617, - |
| 1.56e-28 | FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_f3f969c47e3bd5e9662973e6750266a9 | p@chr7:91081998..91082010, - |
| 1.56e-28 | FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_f3f969c47e3bd5e9662973e6750266a9 | p@chr7:91081998..91082010, - |
| 1.56e-28 | FFCP PHASE1:Mm9::chr5:30339923..30339935,+#_f3f969c47e3bd5e9662973e6750266a9 | p2@Il6 |
| 1.56e-28 | FFCP PHASE2:Mm9::chr5:30339923..30339935,+#_f3f969c47e3bd5e9662973e6750266a9 | p2@Il6 |
| 1.68e-28 | FFCP PHASE1:Hg19::chr7:93518473..93518503,+#_62a5c9954eb95faee43a282564862670 | p@chr7:93518473..93518503, + |
| 1.68e-28 | FFCP PHASE2:Hg19::chr7:93518473..93518503,+#_62a5c9954eb95faee43a282564862670 | p@chr7:93518473..93518503, + |
| 1.83e-28 | FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_98eb1378871f26eb8abd8c5f86344f1c | p@chr10:67598037..67598049, - |
| 1.83e-28 | FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_98eb1378871f26eb8abd8c5f86344f1c | p@chr10:67598037..67598049, - |
| 1.84e-28 | FFCP PHASE1:Hg19::chr3:106484411..106484418,+#_8776c7f499a68c3968b1177cd5bb7b3b | p@chr3:106484411..106484418, + |
| 1.84e-28 | FFCP PHASE2:Hg19::chr3:106484411..106484418,+#_8776c7f499a68c3968b1177cd5bb7b3b | p@chr3:106484411..106484418, + |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical system that consists of the muscles of the body.[VSAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
