Personal tools

UBERON:0005174: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0005174
|alt_id=
|name=back organ
|namespace=
|def="An organ that is part of a back [Obol]." [OBOL:automatic]
|xref=MA:0001901
|is_a=UBERON:0000062
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An organ that is part of a back [Obol]." [OBOL:automatic]
|subset=organ_slim
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005174
|is_a=UBERON:0000062
|is_obsolete=
|located_in=
|located_in=
|name=back organ
|namespace=
|obo_creation_date=
|part_of=UBERON:0001137
|part_of=UBERON:0001137
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=organ_slim
|preceded_by=
|synonym=
|union_of=
|xref=MA:0001901
}}
}}

Revision as of 11:34, 12 September 2014

Name:back organ
Definition:"An organ that is part of a back [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0001901
Subset: organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000062(organ)
part_of:UBERON:0001137(dorsum)



Children

is a:UBERON:0002240 (spinal cord)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005174 (back organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
8.98e-131FFCP PHASE1:Hg19::chr8:131864839..131864841,+#_b314b229517c1661016074638026fc07p@chr8:131864839..131864841, +
8.98e-131FFCP PHASE2:Hg19::chr8:131864839..131864841,+#_b314b229517c1661016074638026fc07p@chr8:131864839..131864841, +
3.04e-85FFCP PHASE1:Hg19::chr17:42993851..42993858,-#_b987726ea365bf1ad8164a3fff73a378p@chr17:42993851..42993858, -
3.04e-85FFCP PHASE2:Hg19::chr17:42993851..42993858,-#_b987726ea365bf1ad8164a3fff73a378p@chr17:42993851..42993858, -
4.06e-85FFCP PHASE2:Hg19::chr17:42993904..42993912,-#_656c1d066c497821deb1a98dbe921f16p@chr17:42993904..42993912, -
4.06e-85FFCP PHASE1:Hg19::chr17:42993904..42993912,-#_656c1d066c497821deb1a98dbe921f16p@chr17:42993904..42993912, -
4.03e-84FFCP PHASE1:Hg19::chr13:109248336..109248343,+#_13c91baf63a1de82ae71a6a623be6637p7@MYO16
4.03e-84FFCP PHASE2:Hg19::chr13:109248336..109248343,+#_13c91baf63a1de82ae71a6a623be6637p7@MYO16
4.55e-74FFCP PHASE1:Hg19::chr1:161274636..161274641,-#_bf299c5d88dda1752977a0cc528cf1c8p@chr1:161274636..161274641, -
4.55e-74FFCP PHASE2:Hg19::chr1:161274636..161274641,-#_bf299c5d88dda1752977a0cc528cf1c8p@chr1:161274636..161274641, -
2.48e-72FFCP PHASE2:Mm9::chr18:84268738..84268777,-#_1bbde9f40932d6215a0c1b011a8e5444p@chr18:84268738..84268777, -
2.48e-72FFCP PHASE2:Mm9::chr11:96608388..96608420,+#_1bbde9f40932d6215a0c1b011a8e5444p@chr11:96608388..96608420, +
2.48e-72FFCP PHASE1:Mm9::chr11:96608388..96608420,+#_1bbde9f40932d6215a0c1b011a8e5444p@chr11:96608388..96608420, +
2.48e-72FFCP PHASE1:Mm9::chr18:84268738..84268777,-#_1bbde9f40932d6215a0c1b011a8e5444p@chr18:84268738..84268777, -
2.48e-72FFCP PHASE1:Mm9::chr2:70053872..70053879,+#_1bbde9f40932d6215a0c1b011a8e5444p@chr2:70053872..70053879, +
2.48e-72FFCP PHASE2:Mm9::chr14:33413108..33413118,+#_1bbde9f40932d6215a0c1b011a8e5444p3@Prrxl1
2.48e-72FFCP PHASE1:Mm9::chr14:33413108..33413118,+#_1bbde9f40932d6215a0c1b011a8e5444p3@Prrxl1
2.48e-72FFCP PHASE2:Mm9::chr2:70053872..70053879,+#_1bbde9f40932d6215a0c1b011a8e5444p@chr2:70053872..70053879, +
9.82e-67FFCP PHASE1:Hg19::chrX:100489588..100489605,+#_22c040860e826e325e6ffb682c68d540p@chrX:100489588..100489605, +
9.82e-67FFCP PHASE2:Hg19::chrX:100489588..100489605,+#_22c040860e826e325e6ffb682c68d540p@chrX:100489588..100489605, +
9.82e-67FFCP PHASE1:Hg19::chr16:19800150..19800179,+#_22c040860e826e325e6ffb682c68d540p@chr16:19800150..19800179, +
9.82e-67FFCP PHASE2:Hg19::chr16:19800150..19800179,+#_22c040860e826e325e6ffb682c68d540p@chr16:19800150..19800179, +
1.54e-66FFCP PHASE1:Hg19::chr11:58390160..58390175,+#_c5adbb46d1b8f1f59e695f94c1ad010fp2@CNTF
1.54e-66FFCP PHASE2:Hg19::chr11:58390160..58390175,+#_c5adbb46d1b8f1f59e695f94c1ad010fp2@CNTF
1.71e-66FFCP PHASE2:Hg19::chr15:46702462..46702465,+#_0e211efbe32974ecdad524a3e664ce7fp@chr15:46702462..46702465, +
1.71e-66FFCP PHASE2:Hg19::chr1:161275096..161275109,-#_0e211efbe32974ecdad524a3e664ce7fp@chr1:161275096..161275109, -
1.71e-66FFCP PHASE1:Hg19::chr1:161275096..161275109,-#_0e211efbe32974ecdad524a3e664ce7fp@chr1:161275096..161275109, -
1.71e-66FFCP PHASE1:Hg19::chr15:46702462..46702465,+#_0e211efbe32974ecdad524a3e664ce7fp@chr15:46702462..46702465, +
2.4e-66FFCP PHASE2:Hg19::chr1:60460743..60460750,+#_55a9c066e247aca47cb988605b694497p@chr1:60460743..60460750, +
2.4e-66FFCP PHASE1:Hg19::chr17:42984119..42984130,-#_55a9c066e247aca47cb988605b694497p43@GFAP
2.4e-66FFCP PHASE1:Hg19::chr1:60460743..60460750,+#_55a9c066e247aca47cb988605b694497p@chr1:60460743..60460750, +
2.4e-66FFCP PHASE2:Hg19::chr17:42984119..42984130,-#_55a9c066e247aca47cb988605b694497p43@GFAP
3.35e-66FFCP PHASE2:Hg19::chr17:42983263..42983264,-#_c66670520ed7a19ca2a151460f2c7d27p@chr17:42983263..42983264, -
3.35e-66FFCP PHASE1:Hg19::chr17:42983263..42983264,-#_c66670520ed7a19ca2a151460f2c7d27p@chr17:42983263..42983264, -
1.35e-65FFCP PHASE1:Mm9::chr11:96132456..96132467,+#_6d9aab03e6f9c997b0b4a7be84d4aa42p4@Hoxb9
1.35e-65FFCP PHASE2:Mm9::chr11:96132456..96132467,+#_6d9aab03e6f9c997b0b4a7be84d4aa42p4@Hoxb9
1.71e-64FFCP PHASE2:Mm9::chr7:57165602..57165612,+#_0f7e2a949aa89086542107634879e64cp6@Slc6a5
1.71e-64FFCP PHASE1:Mm9::chr7:57165602..57165612,+#_0f7e2a949aa89086542107634879e64cp6@Slc6a5
2.34e-60FFCP PHASE1:Mm9::chr11:96143545..96143556,+#_52b3db527fd5305eadaa1b3ce40b434ep6@Hoxb8
2.34e-60FFCP PHASE2:Mm9::chr11:96143545..96143556,+#_52b3db527fd5305eadaa1b3ce40b434ep6@Hoxb8
9.99e-60FFCP PHASE2:Hg19::chr18:77014816..77014819,-#_a3d50eaf82bf9df66412a0fa961fadb2p@chr18:77014816..77014819, -
9.99e-60FFCP PHASE1:Hg19::chr18:77014816..77014819,-#_a3d50eaf82bf9df66412a0fa961fadb2p@chr18:77014816..77014819, -
4.07e-59FFCP PHASE2:Hg19::chr16:74808506..74808519,-#_7a4e6fec3e79f894e73b5fcafdf797bep4@FA2H
4.07e-59FFCP PHASE1:Hg19::chr16:74808506..74808519,-#_7a4e6fec3e79f894e73b5fcafdf797bep4@FA2H
6.9e-59FFCP PHASE2:Mm9::chr11:33103589..33103599,-#_0979982f03a69b652b7d3d12e683473ap3@Tlx3
6.9e-59FFCP PHASE1:Mm9::chr11:33103589..33103599,-#_0979982f03a69b652b7d3d12e683473ap3@Tlx3
1.09e-58FFCP PHASE1:Mm9::chr4:150371190..150371197,+#_8b7df3627ca237edf6acd47124f833c4p1@Uts2
1.09e-58FFCP PHASE2:Mm9::chr4:150371190..150371197,+#_8b7df3627ca237edf6acd47124f833c4p1@Uts2
1.36e-58FFCP PHASE1:Mm9::chr11:96146541..96146544,+#_51c08a211a144a71473ed83bf841f7d9p@chr11:96146541..96146544, +
1.36e-58FFCP PHASE2:Mm9::chr11:96146541..96146544,+#_51c08a211a144a71473ed83bf841f7d9p@chr11:96146541..96146544, +
3.91e-58FFCP PHASE1:Mm9::chr11:96148092..96148105,+#_91647eebd5ac2fae6d31824e84b13f24p@chr11:96148092..96148105, +
3.91e-58FFCP PHASE2:Mm9::chr11:96148092..96148105,+#_91647eebd5ac2fae6d31824e84b13f24p@chr11:96148092..96148105, +
3.91e-58FFCP PHASE2:Mm9::chr7:94732458..94732467,+#_91647eebd5ac2fae6d31824e84b13f24p13@Grm5
3.91e-58FFCP PHASE1:Mm9::chr7:94732458..94732467,+#_91647eebd5ac2fae6d31824e84b13f24p13@Grm5
2.88e-55FFCP PHASE2:Hg19::chr6:133424178..133424190,-#_11ff90c3062b533d9fff87b75186daf4p@chr6:133424178..133424190, -
2.88e-55FFCP PHASE1:Hg19::chr6:133424178..133424190,-#_11ff90c3062b533d9fff87b75186daf4p@chr6:133424178..133424190, -
4.17e-55FFCP PHASE2:Hg19::chrX:100489564..100489583,+#_e4074e9043cc41fb501c0cd7bbd13933p@chrX:100489564..100489583, +
4.17e-55FFCP PHASE1:Hg19::chrX:100489564..100489583,+#_e4074e9043cc41fb501c0cd7bbd13933p@chrX:100489564..100489583, +
4.17e-55FFCP PHASE2:Hg19::chr1:161275189..161275203,-#_e4074e9043cc41fb501c0cd7bbd13933p@chr1:161275189..161275203, -
4.17e-55FFCP PHASE1:Hg19::chr1:161275189..161275203,-#_e4074e9043cc41fb501c0cd7bbd13933p@chr1:161275189..161275203, -
7.24e-55FFCP PHASE1:Hg19::chr17:42983316..42983326,-#_96f1386155829162fc93c6f8e8e5714bp@chr17:42983316..42983326, -
7.24e-55FFCP PHASE2:Hg19::chr17:42983316..42983326,-#_96f1386155829162fc93c6f8e8e5714bp@chr17:42983316..42983326, -
1.81e-54FFCP PHASE1:Hg19::chr1:161275111..161275127,-#_ecb66784ad8baccbcf42fd02a851d641p@chr1:161275111..161275127, -
1.81e-54FFCP PHASE2:Hg19::chr2:27073036..27073042,-#_ecb66784ad8baccbcf42fd02a851d641p@chr2:27073036..27073042, -
1.81e-54FFCP PHASE1:Hg19::chr2:27073036..27073042,-#_ecb66784ad8baccbcf42fd02a851d641p@chr2:27073036..27073042, -
1.81e-54FFCP PHASE2:Hg19::chr1:161275111..161275127,-#_ecb66784ad8baccbcf42fd02a851d641p@chr1:161275111..161275127, -
2.19e-53FFCP PHASE2:Hg19::chr14:36367955..36367964,+#_3081f302aff9f98df26e9b02a839dc23p@chr14:36367955..36367964, +
2.19e-53FFCP PHASE1:Hg19::chr14:36367955..36367964,+#_3081f302aff9f98df26e9b02a839dc23p@chr14:36367955..36367964, +
2.97e-53FFCP PHASE1:Mm9::chr5:24032551..24032557,-#_e8a213fc550135cdb1fe9bb1ae0b172cp1@Gbx1
2.97e-53FFCP PHASE2:Mm9::chr5:24032551..24032557,-#_e8a213fc550135cdb1fe9bb1ae0b172cp1@Gbx1
3.75e-53FFCP PHASE2:Hg19::chr11:114146042..114146050,-#_4a4c496de3215ef53602c51b8dccfbe5p@chr11:114146042..114146050, -
3.75e-53FFCP PHASE1:Hg19::chr11:114146042..114146050,-#_4a4c496de3215ef53602c51b8dccfbe5p@chr11:114146042..114146050, -
4.89e-53FFCP PHASE1:Hg19::chr16:7137754..7137799,+#_7e71889ceda8c42f4f8abe5c842b36e0p@chr16:7137754..7137799, +
4.89e-53FFCP PHASE2:Hg19::chr16:7137754..7137799,+#_7e71889ceda8c42f4f8abe5c842b36e0p@chr16:7137754..7137799, +
4.89e-53FFCP PHASE2:Hg19::chr1:167905363..167905364,-#_7e71889ceda8c42f4f8abe5c842b36e0p12@BRP44
4.89e-53FFCP PHASE1:Hg19::chr1:167905363..167905364,-#_7e71889ceda8c42f4f8abe5c842b36e0p12@BRP44
6.39e-53FFCP PHASE2:Hg19::chr11:119999153..119999163,-#_6785e421238da353b9644ce531eea1fdp24@TRIM29
6.39e-53FFCP PHASE1:Hg19::chr11:119999153..119999163,-#_6785e421238da353b9644ce531eea1fdp24@TRIM29
6.39e-53FFCP PHASE1:Hg19::chr6:151054827..151054836,+#_6785e421238da353b9644ce531eea1fdp23@PLEKHG1
6.39e-53FFCP PHASE2:Hg19::chr6:151054827..151054836,+#_6785e421238da353b9644ce531eea1fdp23@PLEKHG1
1.99e-52FFCP PHASE2:Mm9::chr2:74530108..74530131,+#_6a8af3b983821ab0a3a5f4a67147c64cp@chr2:74530108..74530131, +
1.99e-52FFCP PHASE2:Mm9::chr11:96160098..96160112,+#_6a8af3b983821ab0a3a5f4a67147c64cp8@Hoxb6
1.99e-52FFCP PHASE1:Mm9::chr2:74530108..74530131,+#_6a8af3b983821ab0a3a5f4a67147c64cp@chr2:74530108..74530131, +
1.99e-52FFCP PHASE1:Mm9::chr11:96160098..96160112,+#_6a8af3b983821ab0a3a5f4a67147c64cp8@Hoxb6
2.3e-52FFCP PHASE1:Mm9::chr7:57165453..57165473,+#_94a9955e45e997a8487e506f605b349bp3@Slc6a5
2.3e-52FFCP PHASE2:Mm9::chr7:57165453..57165473,+#_94a9955e45e997a8487e506f605b349bp3@Slc6a5
4.11e-52FFCP PHASE2:Mm9::chr2:74529917..74529926,+#_cf9c4ebe4f27e927579b79923d6a229ep5@Hoxd10
4.11e-52FFCP PHASE1:Mm9::chr2:74529917..74529926,+#_cf9c4ebe4f27e927579b79923d6a229ep5@Hoxd10
8.11e-51FFCP PHASE2:Hg19::chr17:42989173..42989181,-#_c2c95a3f6f486ac740fe06998e9185a7p40@GFAP
8.11e-51FFCP PHASE1:Hg19::chr17:42989173..42989181,-#_c2c95a3f6f486ac740fe06998e9185a7p40@GFAP
1.89e-50FFCP PHASE2:Hg19::chr17:42983296..42983307,-#_896063dd723ba735319c85274491937bp@chr17:42983296..42983307, -
1.89e-50FFCP PHASE1:Hg19::chr17:42983296..42983307,-#_896063dd723ba735319c85274491937bp@chr17:42983296..42983307, -
2.23e-50FFCP PHASE1:Hg19::chrX:106692569..106692585,+#_60e775e1c6f9b8a9690eb6cb6bef6c32p@chrX:106692569..106692585, +
2.23e-50FFCP PHASE2:Hg19::chrX:106692569..106692585,+#_60e775e1c6f9b8a9690eb6cb6bef6c32p@chrX:106692569..106692585, +
2.23e-50FFCP PHASE1:Hg19::chrX:103046616..103046621,+#_60e775e1c6f9b8a9690eb6cb6bef6c32p@chrX:103046616..103046621, +
2.23e-50FFCP PHASE2:Hg19::chrX:103046616..103046621,+#_60e775e1c6f9b8a9690eb6cb6bef6c32p@chrX:103046616..103046621, +
1.47e-48FFCP PHASE2:Mm9::chr15:102355046..102355050,-#_247231b60b8c582d0fce54891f852c6ap1@Npff
1.47e-48FFCP PHASE1:Mm9::chr15:102355046..102355050,-#_247231b60b8c582d0fce54891f852c6ap1@Npff
2.57e-48FFCP PHASE1:Mm9::chr2:135883447..135883459,+#_7eb97f95ae0af7a4926886a1a2fb7fdep12@6330527O06Rik
2.57e-48FFCP PHASE2:Mm9::chr2:135883447..135883459,+#_7eb97f95ae0af7a4926886a1a2fb7fdep12@6330527O06Rik