UBERON:0007914: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0007914 | |||
|is_a=UBERON:0001474 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=head or neck bone | |||
|namespace= | |||
|obo_creation_date= | |||
|part_of=UBERON:0007811 | |part_of=UBERON:0007811 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref=MA:0000569 | |||
}} | }} | ||
Revision as of 11:45, 12 September 2014
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001474(bone element) |
|---|---|
| part_of: | UBERON:0007811(craniocervical region) |
Children
| is a: | UBERON:0003457 (head bone) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Mouse (Mus musculus)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007914 (head or neck bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_570e3aab45d7e47547f628ed89e9d81b | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_570e3aab45d7e47547f628ed89e9d81b | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_9012a5a077064ebfd5b6e162ce136ea6 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_9012a5a077064ebfd5b6e162ce136ea6 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_9012a5a077064ebfd5b6e162ce136ea6 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_9012a5a077064ebfd5b6e162ce136ea6 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_9012a5a077064ebfd5b6e162ce136ea6 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_9012a5a077064ebfd5b6e162ce136ea6 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_9012a5a077064ebfd5b6e162ce136ea6 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_9012a5a077064ebfd5b6e162ce136ea6 | p12@C17orf67 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_c7b014f591b3f452f653d0547dd682df | p1@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_c7b014f591b3f452f653d0547dd682df | p18@Trpm3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_c7b014f591b3f452f653d0547dd682df | p@chr18:81314626..81314636, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_c7b014f591b3f452f653d0547dd682df | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_c7b014f591b3f452f653d0547dd682df | p1@Strc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_c7b014f591b3f452f653d0547dd682df | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_c7b014f591b3f452f653d0547dd682df | p@chr2:170417150..170417155, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_c7b014f591b3f452f653d0547dd682df | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_c7b014f591b3f452f653d0547dd682df | p@chr18:66033526..66033539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_c7b014f591b3f452f653d0547dd682df | p@chr14:31283085..31283097, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_c7b014f591b3f452f653d0547dd682df | p@chr13:43699188..43699216, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_c7b014f591b3f452f653d0547dd682df | p@chr7:29733825..29733837, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_c7b014f591b3f452f653d0547dd682df | p1@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_c7b014f591b3f452f653d0547dd682df | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_c7b014f591b3f452f653d0547dd682df | p@chr12:13508015..13508019, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_c7b014f591b3f452f653d0547dd682df | p1@Tmprss7 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_c7b014f591b3f452f653d0547dd682df | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_c7b014f591b3f452f653d0547dd682df | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_c7b014f591b3f452f653d0547dd682df | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_c7b014f591b3f452f653d0547dd682df | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_c7b014f591b3f452f653d0547dd682df | p@chr3:154459231..154459240, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_c7b014f591b3f452f653d0547dd682df | p1@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_c7b014f591b3f452f653d0547dd682df | p6@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_c7b014f591b3f452f653d0547dd682df | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_c7b014f591b3f452f653d0547dd682df | p1@Espnl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_c7b014f591b3f452f653d0547dd682df | p3@Epyc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_c7b014f591b3f452f653d0547dd682df | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_c7b014f591b3f452f653d0547dd682df | p@chr8:13425469..13425503, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_c7b014f591b3f452f653d0547dd682df | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_c7b014f591b3f452f653d0547dd682df | p2@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_c7b014f591b3f452f653d0547dd682df | p@chr11:75421384..75421397, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_c7b014f591b3f452f653d0547dd682df | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_c7b014f591b3f452f653d0547dd682df | p@chr13:43699228..43699239, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_c7b014f591b3f452f653d0547dd682df | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_c7b014f591b3f452f653d0547dd682df | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_c7b014f591b3f452f653d0547dd682df | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_c7b014f591b3f452f653d0547dd682df | p@chrX:154140781..154140788, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_c7b014f591b3f452f653d0547dd682df | p@chr6:86745686..86745727, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_c7b014f591b3f452f653d0547dd682df | p@chr11:4689776..4689785, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_c7b014f591b3f452f653d0547dd682df | p5@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_c7b014f591b3f452f653d0547dd682df | p1@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_c7b014f591b3f452f653d0547dd682df | p@chr9:41495920..41495928, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_c7b014f591b3f452f653d0547dd682df | p4@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_c7b014f591b3f452f653d0547dd682df | p@chr4:133802857..133802884, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_c7b014f591b3f452f653d0547dd682df | p2@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_c7b014f591b3f452f653d0547dd682df | p@chr17:13983198..13983203, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_c7b014f591b3f452f653d0547dd682df | p2@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_c7b014f591b3f452f653d0547dd682df | p@chr1:182528388..182528403, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_c7b014f591b3f452f653d0547dd682df | p@chr13:48087761..48087775, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_c7b014f591b3f452f653d0547dd682df | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_c7b014f591b3f452f653d0547dd682df | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_c7b014f591b3f452f653d0547dd682df | p@chr8:13425469..13425503, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_c7b014f591b3f452f653d0547dd682df | p3@Gipc3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_c7b014f591b3f452f653d0547dd682df | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_c7b014f591b3f452f653d0547dd682df | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_c7b014f591b3f452f653d0547dd682df | p@chr9:42206730..42206739, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_c7b014f591b3f452f653d0547dd682df | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_c7b014f591b3f452f653d0547dd682df | p@chr3:154459246..154459253, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_c7b014f591b3f452f653d0547dd682df | p@chr14:20649897..20649907, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_c7b014f591b3f452f653d0547dd682df | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_c7b014f591b3f452f653d0547dd682df | p@chr11:89702580..89702593, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_c7b014f591b3f452f653d0547dd682df | p@chr14:63099970..63099980, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_c7b014f591b3f452f653d0547dd682df | p7@Pkn3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_c7b014f591b3f452f653d0547dd682df | p@chr19:10536767..10536777, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_c7b014f591b3f452f653d0547dd682df | p2@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_c7b014f591b3f452f653d0547dd682df | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:89215333..89215341, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_c7b014f591b3f452f653d0547dd682df | p@chr3:31585340..31585360, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:172843796..172843799, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_c7b014f591b3f452f653d0547dd682df | p9@Otof |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_c7b014f591b3f452f653d0547dd682df | p@chr3:35012397..35012405, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_c7b014f591b3f452f653d0547dd682df | p3@Kncn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_c7b014f591b3f452f653d0547dd682df | p@chr17:13983102..13983126, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_c7b014f591b3f452f653d0547dd682df | p@chr9:42206730..42206739, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_c7b014f591b3f452f653d0547dd682df | p4@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_c7b014f591b3f452f653d0547dd682df | p3@Fanca |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_c7b014f591b3f452f653d0547dd682df | p1@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_c7b014f591b3f452f653d0547dd682df | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_c7b014f591b3f452f653d0547dd682df | p2@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_c7b014f591b3f452f653d0547dd682df | p@chr18:81327205..81327211, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_c7b014f591b3f452f653d0547dd682df | p@chr11:11599532..11599539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_c7b014f591b3f452f653d0547dd682df | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_c7b014f591b3f452f653d0547dd682df | p2@Espnl |
