Personal tools

FFCP PHASE1:Hg19::chr5:43412425..43412499,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 9: Line 9:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0006595;1.85e-09;86
|ontology_enrichment_development_v019=UBERON:0006595;1.85e-09;86
|ontology_enrichment_disease=DOID:305!1.13e-15!106;DOID:0050687!3.17e-10!143
|ontology_enrichment_disease=DOID:305!1.13e-15!106;DOID:0050687!3.17e-10!143
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004921!7.79e-24!129;UBERON:0004185!7.79e-24!129;UBERON:0001007!1.29e-23!155;UBERON:0001555!1.29e-23!155;UBERON:0007026!1.29e-23!155;UBERON:0004119!3.62e-22!169;UBERON:0000925!3.62e-22!169;UBERON:0006595!3.62e-22!169;UBERON:0000077!1.22e-18!130;UBERON:0001041!1.12e-16!98;UBERON:0001737!2.31e-13!9;UBERON:0001004!6.43e-12!72;UBERON:0000466!7.96e-11!126;UBERON:0008947!9.62e-11!38;UBERON:0003258!9.62e-11!38;UBERON:0001044!1.21e-10!6;UBERON:0003293!1.21e-10!6;UBERON:0003294!1.21e-10!6;UBERON:0010047!1.21e-10!6;UBERON:0000167!1.21e-10!6;UBERON:0001557!1.66e-10!19;UBERON:0000464!5.52e-10!104;UBERON:0000160!6.12e-10!27;UBERON:0000065!1.48e-09!53;UBERON:0000062!6.32e-09!511;UBERON:0002294!8.91e-09!7;UBERON:0001173!8.91e-09!7;UBERON:0004912!8.91e-09!7;UBERON:0000072!2.46e-08!46;UBERON:0007023!2.80e-08!115;UBERON:0005409!4.61e-08!35;UBERON:0003104!1.06e-07!238;UBERON:0009142!1.06e-07!238;UBERON:0002553!1.98e-07!70;UBERON:0001048!3.61e-07!168;UBERON:0000166!6.78e-07!21;UBERON:0000078!8.00e-07!18
|ontology_enrichment_uberon=UBERON:0004921!7.79e-24!129;UBERON:0004185!7.79e-24!129;UBERON:0001007!1.29e-23!155;UBERON:0001555!1.29e-23!155;UBERON:0007026!1.29e-23!155;UBERON:0004119!3.62e-22!169;UBERON:0000925!3.62e-22!169;UBERON:0006595!3.62e-22!169;UBERON:0000077!1.22e-18!130;UBERON:0001041!1.12e-16!98;UBERON:0001737!2.31e-13!9;UBERON:0001004!6.43e-12!72;UBERON:0000466!7.96e-11!126;UBERON:0008947!9.62e-11!38;UBERON:0003258!9.62e-11!38;UBERON:0001044!1.21e-10!6;UBERON:0003293!1.21e-10!6;UBERON:0003294!1.21e-10!6;UBERON:0010047!1.21e-10!6;UBERON:0000167!1.21e-10!6;UBERON:0001557!1.66e-10!19;UBERON:0000464!5.52e-10!104;UBERON:0000160!6.12e-10!27;UBERON:0000065!1.48e-09!53;UBERON:0000062!6.32e-09!511;UBERON:0002294!8.91e-09!7;UBERON:0001173!8.91e-09!7;UBERON:0004912!8.91e-09!7;UBERON:0000072!2.46e-08!46;UBERON:0007023!2.80e-08!115;UBERON:0005409!4.61e-08!35;UBERON:0003104!1.06e-07!238;UBERON:0009142!1.06e-07!238;UBERON:0002553!1.98e-07!70;UBERON:0001048!3.61e-07!168;UBERON:0000166!6.78e-07!21;UBERON:0000078!8.00e-07!18
|ontology_enrichment_uberon_v019=UBERON:0004921;2.80e-16;33!UBERON:0000160;8.63e-12;17!UBERON:0005409;7.68e-11;22!UBERON:0001555;6.18e-08;54!UBERON:0001829;1.27e-07;2!UBERON:0003127;1.63e-07;2!UBERON:0001007;1.78e-07;81!UBERON:0000341;3.28e-07;2!UBERON:0006562;3.39e-07;2
|ontology_enrichment_uberon_v019=UBERON:0004921;2.80e-16;33!UBERON:0000160;8.63e-12;17!UBERON:0005409;7.68e-11;22!UBERON:0001555;6.18e-08;54!UBERON:0001829;1.27e-07;2!UBERON:0003127;1.63e-07;2!UBERON:0001007;1.78e-07;81!UBERON:0000341;3.28e-07;2!UBERON:0006562;3.39e-07;2
|ontology_enrichment_uberon_v019_2=UBERON:0001007,3.02e-17,145;UBERON:0001555,3.02e-17,145;UBERON:0007026,3.02e-17,145;UBERON:0004921,3.00e-16,118;UBERON:0004119,9.31e-15,160;UBERON:0000925,9.31e-15,160;UBERON:0006595,9.31e-15,160;UBERON:0000160,8.24e-12,17;UBERON:0005409,2.27e-09,25;UBERON:0001041,5.11e-09,87;UBERON:0007023,1.31e-08,114;UBERON:0001829,1.27e-07,2;UBERON:0003127,1.63e-07,2;UBERON:0000341,3.19e-07,2
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.6863920421339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,1.65629520055781,0.337169380156203,0.964044119533928,1.32352767278873,1.74303555273925,0.949082476444386,0.808987848960987,0.392442930250692,1.15424147083917,0,0,0,0,1.26755034821831,0,0,0,4.79654910318143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48793738648926,4.32359860250884,5.0496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.616122696835318,0,2.92278449306521,22.060290438611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,1.50630081242847,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.307160702099232,0,0,0,0,0,17.9323189425963,24.0367006512098,0,0,0,0,6.91986303834417,1.61119057208048,0,0.0986434056369336,0,0,0,0,0,0.7812832832557,0.174919999992391,39.8749766489136,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,3.53971189117467,0,0,13.7329195946951,1.52106320690811,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,42.4405301213784,0,0,45.7820488296112,43.3442066066362,28.1073866669468,0,0,0,0,0,0,0,2.15231080825299,0,0,19.3585145677862,0,0,0,0,0,0,0,1.19472429772959,355.477322991211,0,7.63662848674576,2.93977192243133,5.74590763430657,0,0,0.19351266257817,0.219267951258557,0.410577285266046,1.35784623083787,0,31.411322968494,0,0,0,10.1686719022098,0.561111741760736,21.3452994739353,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,1.19807400299395,0,0,0,0,0,0,0,0,0.0984274815147488,0.338693328263138,0,0,0,0,0,0,0,0,0,1.02447419488958,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,0,0,0,0,2.11444506695002,3.31040978959853,4.55892484789031,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38457178078183,0,0,0,0,0.300841313397029,0,151.61371817922,29.3335497819193,0,0.887136517302272,0.0675375846183947,0,0,0,0,1025.79028178979,6.45074531906083,0,57.1098051548991,0,0,0,0.91064876540519,0.887023701626388,0,0,0,0,0,0.111231401892069,1.02041020705668,0,0,3.65263488203798,0,0,0.0714765441766563,0,0,0,0,0.62164849248911,0.17071847709395,0.691259661814092,1417.16891995399,0,0,0,16.2665876666276,0,0,0,0,1.21917924982269,0,0,0,6.31424290976881,0.233939463462106,0,0,0,0,0,24.1555114877867,2.84127428655144,0,0,0,0,0,0,0,0,0,0,47.6739016077106,0,0,2.92134555298607,1007.36950635637,0,0,0,0,20.6320467801006,0,0,0,0,0,0,0.61193297845189,0,0.0918948995348449,0,0.303114792872958,0,0,0,60.3452168779776,16.9025746339256,0,0,0,12.729431655633,3.63810940124795,43.9787830751862,52.7039283671333,16.4339009355594,108.659141169905,89.1529755543316,0.0814032686109745,0,0,0,4.69281884806909,0.366724332548599,0.406896178315738,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.6863920421339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,1.65629520055781,0.337169380156203,0.964044119533928,1.32352767278873,1.74303555273925,0.949082476444386,0.808987848960987,0.392442930250692,1.15424147083917,0,0,0,0,1.26755034821831,0,0,0,4.79654910318143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48793738648926,4.32359860250884,5.0496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.616122696835318,0,2.92278449306521,22.060290438611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,1.50630081242847,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.307160702099232,0,0,0,0,0,17.9323189425963,24.0367006512098,0,0,0,0,6.91986303834417,1.61119057208048,0,0.0986434056369336,0,0,0,0,0,0.7812832832557,0.174919999992391,39.8749766489136,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,3.53971189117467,0,0,13.7329195946951,1.52106320690811,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,42.4405301213784,0,0,45.7820488296112,43.3442066066362,28.1073866669468,0,0,0,0,0,0,0,2.15231080825299,0,0,19.3585145677862,0,0,0,0,0,0,0,1.19472429772959,355.477322991211,0,7.63662848674576,2.93977192243133,5.74590763430657,0,0,0.19351266257817,0.219267951258557,0.410577285266046,1.35784623083787,0,31.411322968494,0,0,0,10.1686719022098,0.561111741760736,21.3452994739353,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,1.19807400299395,0,0,0,0,0,0,0,0,0.0984274815147488,0.338693328263138,0,0,0,0,0,0,0,0,0,1.02447419488958,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,0,0,0,0,2.11444506695002,3.31040978959853,4.55892484789031,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38457178078183,0,0,0,0,0.300841313397029,0,151.61371817922,29.3335497819193,0,0.887136517302272,0.0675375846183947,0,0,0,0,1025.79028178979,6.45074531906083,0,57.1098051548991,0,0,0,0.91064876540519,0.887023701626388,0,0,0,0,0,0.111231401892069,1.02041020705668,0,0,3.65263488203798,0,0,0.0714765441766563,0,0,0,0,0.62164849248911,0.17071847709395,0.691259661814092,1417.16891995399,0,0,0,16.2665876666276,0,0,0,0,1.21917924982269,0,0,0,6.31424290976881,0.233939463462106,0,0,0,0,0,24.1555114877867,2.84127428655144,0,0,0,0,0,0,0,0,0,0,47.6739016077106,0,0,2.92134555298607,1007.36950635637,0,0,0,0,20.6320467801006,0,0,0,0,0,0,0.61193297845189,0,0.0918948995348449,0,0.303114792872958,0,0,0,60.3452168779776,16.9025746339256,0,0,0,12.729431655633,3.63810940124795,43.9787830751862,52.7039283671333,16.4339009355594,108.659141169905,89.1529755543316,0.0814032686109745,0,0,0,4.69281884806909,0.366724332548599,0.406896178315738,0,0,0
|short_description=p2@CCL28
|short_description=p2@CCL28
}}
}}

Revision as of 21:21, 17 November 2012

Short description:p2@CCL28
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_CCL28_5end
Coexpression cluster:C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea
Association with transcript: 0bp_to_ENST00000361115, ENST00000489442, ENST00000514421, NM_148672, uc003jns.2, uc003jnt.2, uc003jnu.2_5end
EntrezGene:CCL28
HGNC: 17700
UniProt: Q9NRJ3A0N0Q3
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
250
500
750
1000
1250
1500




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data








Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.