FFCP PHASE1:Hg19::chr15:39883501..39883528,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002371!2.81e-19!591;CL:0000055!9.98e-19!180;CL:0000057!3.68e-18!75;CL:0000144!1.43e-16!625;CL:0000548!2.24e-15!679;CL:0000004!2.24e-15!679;CL:0000255!2.24e-15!679;CL:0000012!4.97e-15!682;CL:0000003!1.03e-10!722;CL:0002620!5.95e-09!23;CL:0000723!2.88e-08!436;CL:0000063!5.03e-08!578;CL:0000048!7.29e-08!430;CL:0002334!1.44e-07!12;CL:0000034!1.61e-07!444;CL:0000222!2.81e-07!119;CL:0000220!4.89e-07!246;CL:0002321!8.08e-07!248 | |ontology_enrichment_celltype=CL:0002371!2.81e-19!591;CL:0000055!9.98e-19!180;CL:0000057!3.68e-18!75;CL:0000144!1.43e-16!625;CL:0000548!2.24e-15!679;CL:0000004!2.24e-15!679;CL:0000255!2.24e-15!679;CL:0000012!4.97e-15!682;CL:0000003!1.03e-10!722;CL:0002620!5.95e-09!23;CL:0000723!2.88e-08!436;CL:0000063!5.03e-08!578;CL:0000048!7.29e-08!430;CL:0002334!1.44e-07!12;CL:0000034!1.61e-07!444;CL:0000222!2.81e-07!119;CL:0000220!4.89e-07!246;CL:0002321!8.08e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002580;2.58e-09;3!CL:0000197;5.11e-08;6!CL:0000098;5.11e-08;6!CL:0002167;5.11e-08;6!CL:0000135;7.96e-08;3!CL:0000388;7.96e-08;3!CL:0002139;2.40e-07;24!CL:0000136;3.18e-07;13!CL:0000057;8.45e-07;73 | |ontology_enrichment_celltype_v019=CL:0002580;2.58e-09;3!CL:0000197;5.11e-08;6!CL:0000098;5.11e-08;6!CL:0002167;5.11e-08;6!CL:0000135;7.96e-08;3!CL:0000388;7.96e-08;3!CL:0002139;2.40e-07;24!CL:0000136;3.18e-07;13!CL:0000057;8.45e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.61e-18,76;CL:0002580,2.78e-09,3;CL:0000135,4.17e-08,3;CL:0000388,4.17e-08,3;CL:0000136,4.31e-08,15;CL:0000197,5.82e-08,6;CL:0000098,5.82e-08,6;CL:0002167,5.82e-08,6;CL:0002139,2.22e-07,24;CL:0002561,9.86e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;5.29e-09;5!DOID:450;5.29e-09;5!DOID:66;5.29e-09;5!DOID:423;5.29e-09;5!DOID:0080000;5.29e-09;5!DOID:11722;5.29e-09;5 | |ontology_enrichment_disease_v019=DOID:17;5.29e-09;5!DOID:450;5.29e-09;5!DOID:66;5.29e-09;5!DOID:423;5.29e-09;5!DOID:0080000;5.29e-09;5!DOID:11722;5.29e-09;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,7.04e-09,5;DOID:450,7.04e-09,5;DOID:66,7.04e-09,5;DOID:423,7.04e-09,5;DOID:0080000,7.04e-09,5;DOID:11722,7.04e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.46e-09!95;UBERON:0004872!1.74e-09!84;UBERON:0002199!2.26e-09!45;UBERON:0002416!2.26e-09!45;UBERON:0001981!4.26e-09!60;UBERON:0007500!4.26e-09!60;UBERON:0004537!4.26e-09!60;UBERON:0006965!4.26e-09!60;UBERON:0000055!5.37e-09!69;UBERON:0001637!1.23e-08!42;UBERON:0003509!1.23e-08!42;UBERON:0004572!1.23e-08!42;UBERON:0000486!2.27e-08!82;UBERON:0002049!1.19e-07!79;UBERON:0007798!1.19e-07!79;UBERON:0002097!1.33e-07!40;UBERON:0000914!3.17e-07!83;UBERON:0002329!3.17e-07!83;UBERON:0003077!3.17e-07!83;UBERON:0003059!3.17e-07!83;UBERON:0007282!3.17e-07!83;UBERON:0009618!3.17e-07!83;UBERON:0007285!3.17e-07!83 | |ontology_enrichment_uberon=UBERON:0003102!1.46e-09!95;UBERON:0004872!1.74e-09!84;UBERON:0002199!2.26e-09!45;UBERON:0002416!2.26e-09!45;UBERON:0001981!4.26e-09!60;UBERON:0007500!4.26e-09!60;UBERON:0004537!4.26e-09!60;UBERON:0006965!4.26e-09!60;UBERON:0000055!5.37e-09!69;UBERON:0001637!1.23e-08!42;UBERON:0003509!1.23e-08!42;UBERON:0004572!1.23e-08!42;UBERON:0000486!2.27e-08!82;UBERON:0002049!1.19e-07!79;UBERON:0007798!1.19e-07!79;UBERON:0002097!1.33e-07!40;UBERON:0000914!3.17e-07!83;UBERON:0002329!3.17e-07!83;UBERON:0003077!3.17e-07!83;UBERON:0003059!3.17e-07!83;UBERON:0007282!3.17e-07!83;UBERON:0009618!3.17e-07!83;UBERON:0007285!3.17e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0000947;1.85e-08;21!UBERON:0010191;1.85e-08;21!UBERON:0007846;7.96e-08;3!UBERON:0000043;7.96e-08;3!UBERON:0007845;7.96e-08;3!UBERON:0004573;2.35e-07;33!UBERON:0004571;2.35e-07;33!UBERON:0001637;4.06e-07;42!UBERON:0003509;4.06e-07;42!UBERON:0004572;4.06e-07;42!UBERON:0005406;4.81e-07;2!UBERON:0000310;7.60e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0000947;1.85e-08;21!UBERON:0010191;1.85e-08;21!UBERON:0007846;7.96e-08;3!UBERON:0000043;7.96e-08;3!UBERON:0007845;7.96e-08;3!UBERON:0004573;2.35e-07;33!UBERON:0004571;2.35e-07;33!UBERON:0001637;4.06e-07;42!UBERON:0003509;4.06e-07;42!UBERON:0004572;4.06e-07;42!UBERON:0005406;4.81e-07;2!UBERON:0000310;7.60e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.70e-09,68;UBERON:0001637,5.62e-09,42;UBERON:0003509,5.62e-09,42;UBERON:0004572,5.62e-09,42;UBERON:0000947,1.54e-08,21;UBERON:0010191,1.54e-08,21;UBERON:0002199,2.52e-08,46;UBERON:0002416,2.52e-08,46;UBERON:0002097,2.74e-08,41;UBERON:0007846,4.17e-08,3;UBERON:0000043,4.17e-08,3;UBERON:0007845,4.17e-08,3;UBERON:0007500,1.74e-07,59;UBERON:0001981,1.74e-07,59;UBERON:0004537,1.74e-07,59;UBERON:0006965,1.74e-07,59;UBERON:0002049,2.53e-07,78;UBERON:0007798,2.53e-07,78;UBERON:0004573,3.42e-07,33;UBERON:0004571,3.42e-07,33;UBERON:0005406,4.89e-07,2;UBERON:0000310,8.02e-07,10;UBERON:0005933,9.86e-07,2;UBERON:0005942,9.86e-07,2;UBERON:0005932,9.86e-07,2 | |||
|phase1_expression=3.81524596468169,2.14100523890983,0.704772020479856,10.007329835313,2.68176656656373,6.10636966870258,2.53299878168311,0.631719873426831,0,0,0,0.436882744260345,0.263766978228454,0.247532705920093,0.331397375727916,2.01697543935533,1.80808358407193,3.65155045193687,4.39139518911456,0,0.408001382488506,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0.6024118375565,0,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376484679085209,0,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0.502497330513487,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,1.44575660953827,0,0.579386075843295,0,1.94653948121054,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,3.35599548967925,3.85165258716094,0.417989933073621,0,0,0,2.01414658554573,0,2.19655851793353,1.83831540172934,3.24056779152704,0.267899184852239,0.22452937262617,0,0,0,0.916008719652036,0,0,0,3.47880366186723,1.39293562831038,1.32409180813219,0.860509862246441,0,0,1.06748995729705,3.94668077467456,0,0,0.490385709340376,0,0.576175924479999,0,0,0,0.597794722207204,0.117434498643765,0.323745888736263,0,0.61246251376468,0,0.103325781175765,2.37600571456411,1.48360157567134,0,0,0,0,0,0.877955241761676,3.98434134538726,1.05166641234618,2.94923676216055,6.45802688479903,2.56268866582281,1.05965950579781,3.00091096084402,0.515262646192195,4.89517026086695,0.744467425326359,0.675105328965065,0.779496041289589,4.79624171063818,0.644349290496095,0,3.55009592516614,0.10075209822764,1.52604533079439,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,7.71889125831462,0,3.71494342425583,3.60939740834793,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.402115889646523,0.277765335475589,0,1.03993478527958,0,0.115930404975077,0,1.44366447761074,2.77791307545966,2.28304982681518,0.790204397959275,0,0,0,0,0,0,0.567100388969546,3.13454829459969,0.290633938513962,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0,0,0,0,1.19812427745791,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0.542530047399471,6.23912584592421,9.8135943838439,4.73107245101804,2.10854546986884,0,0,1.03473071292505,1.32845119707087,0.368738337083406,1.39013783148933,0,0,0,0,0,0.303127571446259,3.32870879020994,0.604780586659361,2.23297027036899,4.75732117192994,5.05188169979532,0.384417447767103,0.511707249066704,2.2519548960105,5.93672265779964,0.771048469013278,0.532685175939381,0,0,0.697262270759755,0,0.40101294060657,0.184161977871793,0.34444334449382,0,0.393373244878272,0,0,0,0,0,1.13733384070897,0.850468526382578,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,1.95018073810956,0,0.193341436584244,0.154048617114644,0.15350367472613,0.827019434907183,0,0.290033387828457,0,0.356128142586949,0.495854746082934,0.768760269460425,0.255225424989168,0.10115778085555,0,2.83331112147576,0,0.308033580176089,0,0,0.74129687641568,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,1.26377536871694,0,1.46228093778771,0,0,0.424216295861138,0,0,0.66343897524122,0,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0.717056761020258,0.392996164052485,0.7133421029625,0,1.05553817648832,0.329294892959902,0,0,0.0962221127255121,0,0,0,1.72202149068492,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,2.15012491469462,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,1.55519793830904,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,1.44119953416961,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0.447764408660622,0.233713309847224,0.554805861502613,0,1.0062716070103,0,0.228840068396924,0,0,0.73927574994817,0.159296767163702,0,0.465788870628778,0,0.797525143673985,0.521745061811734,0.300515217994437,0,0,0.363697318405119,0,0.464033759878494,1.19428766609585,2.40016658797892,1.37358282073117,0,0,0,0,0,0.906823702049089,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0.352675943690684,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0,0.327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| ||
|short_description=p@chr15:39883501..39883528,- | |short_description=p@chr15:39883501..39883528,- | ||
}} | }} |
Revision as of 03:46, 18 November 2012
Short description: | p@chr15:39883501..39883528, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:39883501..39883528, - |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.61e-18 | 76 |
preadipocyte of the breast | 2.78e-09 | 3 |
fibrocyte | 4.17e-08 | 3 |
tendon cell | 4.17e-08 | 3 |
fat cell | 4.31e-08 | 15 |
receptor cell | 5.82e-08 | 6 |
sensory epithelial cell | 5.82e-08 | 6 |
olfactory epithelial cell | 5.82e-08 | 6 |
endothelial cell of vascular tree | 2.22e-07 | 24 |
outer root sheath cell | 9.86e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vessel | 4.70e-09 | 68 |
artery | 5.62e-09 | 42 |
arterial blood vessel | 5.62e-09 | 42 |
arterial system | 5.62e-09 | 42 |
aorta | 1.54e-08 | 21 |
aortic system | 1.54e-08 | 21 |
integument | 2.52e-08 | 46 |
integumental system | 2.52e-08 | 46 |
skin of body | 2.74e-08 | 41 |
dense regular connective tissue | 4.17e-08 | 3 |
tendon | 4.17e-08 | 3 |
regular connective tissue | 4.17e-08 | 3 |
epithelial tube open at both ends | 1.74e-07 | 59 |
blood vessel | 1.74e-07 | 59 |
blood vasculature | 1.74e-07 | 59 |
vascular cord | 1.74e-07 | 59 |
vasculature | 2.53e-07 | 78 |
vascular system | 2.53e-07 | 78 |
systemic artery | 3.42e-07 | 33 |
systemic arterial system | 3.42e-07 | 33 |
perirenal fat | 4.89e-07 | 2 |
breast | 8.02e-07 | 10 |
hair root sheath | 9.86e-07 | 2 |
hair outer root sheath | 9.86e-07 | 2 |
bulb of hair follicle | 9.86e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.04e-09 | 5 |
myotonic disease | 7.04e-09 | 5 |
muscle tissue disease | 7.04e-09 | 5 |
myopathy | 7.04e-09 | 5 |
muscular disease | 7.04e-09 | 5 |
myotonic dystrophy | 7.04e-09 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.