FFCP PHASE1:Hg19::chr15:90809334..90809354,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000624;2.58e-23;6!CL:0000791;2.11e-16;18!CL:0000789;2.11e-16;18!CL:0002419;2.11e-16;18!CL:0000623;5.60e-13;3!CL:0000898;2.72e-12;3!CL:0000226;2.93e-12;3!CL:0000842;2.93e-12;3!CL:0000767;3.41e-12;3!CL:0000084;2.62e-11;25!CL:0000542;7.99e-11;53!CL:0000815;1.08e-08;2!CL:0000792;1.08e-08;2!CL:0002677;1.08e-08;2!CL:0000236;4.04e-07;13 | |ontology_enrichment_celltype_v019=CL:0000624;2.58e-23;6!CL:0000791;2.11e-16;18!CL:0000789;2.11e-16;18!CL:0002419;2.11e-16;18!CL:0000623;5.60e-13;3!CL:0000898;2.72e-12;3!CL:0000226;2.93e-12;3!CL:0000842;2.93e-12;3!CL:0000767;3.41e-12;3!CL:0000084;2.62e-11;25!CL:0000542;7.99e-11;53!CL:0000815;1.08e-08;2!CL:0000792;1.08e-08;2!CL:0002677;1.08e-08;2!CL:0000236;4.04e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.26e-23,6;CL:0000838,8.24e-18,52;CL:0000542,2.15e-17,53;CL:0000051,2.15e-17,53;CL:0000791,2.34e-16,18;CL:0000789,2.34e-16,18;CL:0002420,2.34e-16,18;CL:0002419,2.34e-16,18;CL:0000790,2.34e-16,18;CL:0000623,5.73e-13,3;CL:0000825,5.73e-13,3;CL:0000738,1.15e-12,136;CL:0000226,3.36e-12,3;CL:0000898,3.36e-12,3;CL:0000842,3.36e-12,3;CL:0000767,3.62e-12,3;CL:0002087,5.28e-12,115;CL:0000084,2.81e-11,25;CL:0000827,2.81e-11,25;CL:0000037,4.37e-09,168;CL:0000815,1.38e-08,2;CL:0000792,1.38e-08,2;CL:0002677,1.38e-08,2;CL:0000988,2.55e-08,177;CL:0002031,5.29e-08,120;CL:0002032,4.66e-07,161;CL:0000837,4.66e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.11e-16;18!CL:0000051;7.99e-11;53 | |ontology_enrichment_development_v019=CL:0000790;2.11e-16;18!CL:0000051;7.99e-11;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.60e-11!34;UBERON:0003528!8.60e-11!34;UBERON:0001869!3.06e-10!32;UBERON:0001893!1.57e-09!34;UBERON:0002791!2.92e-09!33;UBERON:0003080!1.07e-08!42;UBERON:0001049!1.22e-08!57;UBERON:0005068!1.22e-08!57;UBERON:0006241!1.22e-08!57;UBERON:0007135!1.22e-08!57;UBERON:0001017!2.14e-08!82;UBERON:0002780!3.39e-08!41;UBERON:0001890!3.39e-08!41;UBERON:0006240!3.39e-08!41;UBERON:0005743!1.37e-07!86;UBERON:0002619!1.52e-07!22;UBERON:0000956!2.24e-07!25;UBERON:0000203!2.24e-07!25;UBERON:0002616!5.73e-07!59;UBERON:0000955!9.57e-07!69;UBERON:0006238!9.57e-07!69 | |ontology_enrichment_uberon=UBERON:0002020!8.60e-11!34;UBERON:0003528!8.60e-11!34;UBERON:0001869!3.06e-10!32;UBERON:0001893!1.57e-09!34;UBERON:0002791!2.92e-09!33;UBERON:0003080!1.07e-08!42;UBERON:0001049!1.22e-08!57;UBERON:0005068!1.22e-08!57;UBERON:0006241!1.22e-08!57;UBERON:0007135!1.22e-08!57;UBERON:0001017!2.14e-08!82;UBERON:0002780!3.39e-08!41;UBERON:0001890!3.39e-08!41;UBERON:0006240!3.39e-08!41;UBERON:0005743!1.37e-07!86;UBERON:0002619!1.52e-07!22;UBERON:0000956!2.24e-07!25;UBERON:0000203!2.24e-07!25;UBERON:0002616!5.73e-07!59;UBERON:0000955!9.57e-07!69;UBERON:0006238!9.57e-07!69 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@NGRN | |short_description=p7@NGRN | ||
}} | }} |
Revision as of 18:12, 18 November 2012
Short description: | p7@NGRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_NGRN_5end |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | 439bp_to_NR_028052, uc002bpg.1_5end |
EntrezGene: | NGRN |
HGNC: | 18077 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 3.26e-23 | 6 |
lymphoid lineage restricted progenitor cell | 8.24e-18 | 52 |
lymphocyte | 2.15e-17 | 53 |
common lymphoid progenitor | 2.15e-17 | 53 |
mature alpha-beta T cell | 2.34e-16 | 18 |
alpha-beta T cell | 2.34e-16 | 18 |
immature T cell | 2.34e-16 | 18 |
mature T cell | 2.34e-16 | 18 |
immature alpha-beta T cell | 2.34e-16 | 18 |
natural killer cell | 5.73e-13 | 3 |
pro-NK cell | 5.73e-13 | 3 |
leukocyte | 1.15e-12 | 136 |
single nucleate cell | 3.36e-12 | 3 |
naive T cell | 3.36e-12 | 3 |
mononuclear cell | 3.36e-12 | 3 |
basophil | 3.62e-12 | 3 |
nongranular leukocyte | 5.28e-12 | 115 |
T cell | 2.81e-11 | 25 |
pro-T cell | 2.81e-11 | 25 |
hematopoietic stem cell | 4.37e-09 | 168 |
regulatory T cell | 1.38e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.38e-08 | 2 |
naive regulatory T cell | 1.38e-08 | 2 |
hematopoietic cell | 2.55e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 5.29e-08 | 120 |
hematopoietic oligopotent progenitor cell | 4.66e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.66e-07 | 161 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.