FFCP PHASE1:Hg19::chr17:29485994..29486011,+: Difference between revisions
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|ontology_enrichment_development_v019=CL:0000790;1.36e-29;18!CL:0000051;1.70e-08;53 | |ontology_enrichment_development_v019=CL:0000790;1.36e-29;18!CL:0000051;1.70e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.59e-08!15;UBERON:0000179!1.59e-08!15;UBERON:0000463!1.59e-08!15;UBERON:0004177!5.33e-08!7;UBERON:0002370!6.65e-07!4;UBERON:0005058!6.65e-07!4;UBERON:0009113!6.65e-07!4;UBERON:0003295!6.65e-07!4;UBERON:0005562!6.65e-07!4 | |ontology_enrichment_uberon=UBERON:0000178!1.59e-08!15;UBERON:0000179!1.59e-08!15;UBERON:0000463!1.59e-08!15;UBERON:0004177!5.33e-08!7;UBERON:0002370!6.65e-07!4;UBERON:0005058!6.65e-07!4;UBERON:0009113!6.65e-07!4;UBERON:0003295!6.65e-07!4;UBERON:0005562!6.65e-07!4 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p8@NF1 | |short_description=p8@NF1 | ||
}} | }} |
Revision as of 18:24, 19 November 2012
Short description: | p8@NF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_NF1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -71bp_to_ENST00000490416_5end |
EntrezGene: | NF1 |
HGNC: | 7765 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.04e-29 | 18 |
alpha-beta T cell | 2.04e-29 | 18 |
immature T cell | 2.04e-29 | 18 |
mature T cell | 2.04e-29 | 18 |
immature alpha-beta T cell | 2.04e-29 | 18 |
CD8-positive, alpha-beta T cell | 1.73e-24 | 11 |
T cell | 1.12e-20 | 25 |
pro-T cell | 1.12e-20 | 25 |
natural killer cell | 1.94e-18 | 3 |
pro-NK cell | 1.94e-18 | 3 |
lymphoid lineage restricted progenitor cell | 8.68e-16 | 52 |
lymphocyte | 1.93e-15 | 53 |
common lymphoid progenitor | 1.93e-15 | 53 |
regulatory T cell | 3.13e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.13e-12 | 2 |
naive regulatory T cell | 3.13e-12 | 2 |
leukocyte | 1.98e-09 | 136 |
nongranular leukocyte | 5.33e-09 | 115 |
CD4-positive, alpha-beta T cell | 8.03e-09 | 6 |
naive T cell | 1.93e-08 | 3 |
single nucleate cell | 3.90e-08 | 3 |
mononuclear cell | 3.90e-08 | 3 |
hematopoietic stem cell | 6.03e-07 | 168 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.