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MacroAPE 1083:CNhs11882 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;206.61770913214423;153.98362116964336;816.9163309396616;310.0908785631619!2;3.392917035447506;3.392917035447506;1339.571724763637;141.250980...")
 
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2!10455-106G5;0.0352326!10534-107G3;0.0731087!10429-106D6;0.0733952!10464-106H5;0.0583804!10827-111C8;0.0747842!10789-110H6;0.104903!10828-111C9;0.0395314!10788-110H5;0.0746689!10792-110H9;0.042907!10765-110E9;0.154529!10829-111D1;0.0883379!10830-111D2;0.148971!10831-111D3;0.116423!10832-111D4;0.128769!10833-111D5;0.080825!10764-110E8;0.074052!10770-110F5;0.0559368!10399-106A3;0.110414!10400-106A4;0.0374362!10405-106A9;0.0235328!10834-111D6;0.0259892!10835-111D7;0.126948!10836-111D8;0.110155!10837-111D9;0.0362847!10699-109G6;0.0663372!10802-111A1;0.103499!10796-110I4;0.0815789!10010-101C1;0.0203357!10810-111A9;0.0302891!10421-106C7;0.0622576!10708-109H6;0.0672755!12235-129G3;0.0174115!12236-129G4;0.63526!12237-129G5;0.149861!10167-103B5;0.580582!10151-102I7;0.00998775!10428-106D5;0.0120719!10795-110I3;0.547221!10805-111A4;0.054357!10052-101G7;0.045191!10189-103D9;0.0809509!10589-108D4;0.0871324!10425-106D2;0.153013!10427-106D4;0.878186!10702-109G9;0.102709!10432-106D9;0.182077!10496-107C1;0.0202044!10718-109I7;0.111007!10011-101C2;0.0340925!10053-101G8;0.0366845!10686-109F2;0.0848141!10084-102B3;0.410662!10012-101C3;0.0133761!10085-102B4;0.00701911!10482-107A5;0.0511086!10419-106C5;0.0465392!10080-102A8;0.0685843!10760-110E4;0.170811!10709-109H7;0.0333246!10710-109H8;0.0057834!10703-109H1;0.034528!10719-109I8;0.42202!10642-109A3;0.692238!10177-103C6;0.994518!10164-103B2;0.00927001!10173-103C2;0.0164409!10166-103B4;0.0481255!10083-102B2;0.0354319!10188-103D8;0.0340177!10552-107I3;0.00913487!10553-107I4;0.0572339!10013-101C4;0.1372!10536-107G5;0.0438835!10618-108G6;0.272147!10423-106C9;0.0516595!10785-110H2;0.0797717!12238-129G6;0.0135461!12239-129G7;0.432736!12240-129G8;0.383614!10416-106C2;0.369256!10801-110I9;0.162569!10766-110F1;0.0416898!10824-111C5;0.0320699!10825-111C6;0.0566824!10826-111C7;0.0478019!10454-106G4;0.0552496!10409-106B4;0.133297!10638-108I8;0.0454196!10636-108I6;0.0074154!10513-107D9;0.0251438!10420-106C6;0.0288023!10082-102B1;0.2853!10014-101C5;0.147459!10070-101I7;0.0520738!10452-106G2;0.099198!10453-106G3;0.175634!10449-106F8;0.183328!10042-101F6;0.169438!10069-101I6;0.00813376!10193-103E4;0.0467202!10631-108I1;0.00518879!10438-106E6;0.130994!10488-107B2;0.0468942!10196-103E7;0.0108696!10071-101I8;0.0646912!10071-101I8;0.0519236!10041-101F5;0.0234282!10451-106G1;0.0401695!10450-106F9;0.0607326!10604-108F1;0.131579!10605-108F2;0.010523!10606-108F3;0.00160758!10603-108E9;0.0084128!10497-107C2;0.00716811!10448-106F7;0.0713409!10643-109A4;0.205793!10426-106D3;0.0289314!10431-106D8;0.0210089!10197-103E8;0.0439921!10443-106F2;0.0355512!10815-111B5;0.0520603!10816-111B6;0.0515887!10817-111B7;0.039832!10015-101C6;0.0435841!10410-106B5;0.0542539!10054-101G9;0.120831!10758-110E2;0.0146641!10711-109H9;0.470007!10040-101F4;0.142444!10470-106I2;0.00905195!10415-106C1;0.0319764!10198-103E9;0.0284255!10614-108G2;0.0943232!10612-108F9;0.0148407!10549-107H9;0.0224097!10615-108G3;0.104851!10487-107B1;0.351373!10433-106E1;0.0949756!10688-109F4;0.000672877!10444-106F3;0.0295323!10444-106F3;0.540674!10485-107A8;0.729609!10413-106B8;0.147179!10175-103C4;0.124559!10161-103A8;0.0115547!12131-128D7;0.0109554!10624-108H3;0.0772515!10712-109I1;0.903102!10205-103F7;0.138297!10206-103F8;0.0278131!10207-103F9;0.0235805!10050-101G5;0.076534!10051-101G6;0.154103!10016-101C7;0.0546781!10046-101G1;0.0663807!10778-110G4;0.0598086!10633-108I3;0.0755349!10818-111B8;0.122239!10819-111B9;0.0487894!10820-111C1;0.0567687!10484-107A7;0.0590946!10808-111A7;0.0353683!10169-103B7;0.190913!10153-102I9;0.0114245!13425-144D5;0.0116408!13433-144E4;0.342204!13437-144E8;0.410669!11904-125F5;0.304227!11905-125F6;0.0870738!10039-101F3;0.0482261!10791-110H8;0.00970032!10017-101C8;0.0275757!10045-101F9;0.239379!10509-107D5;0.256047!10839-111E2;0.00739807!10692-109F8;0.157278!10079-102A7;0.0473153!10078-102A6;0.0284867!10721-110A1;0.0633007!10569-108B2;0.0502219!10570-108B3;0.0601381!10571-108B4;0.134068!10647-109A8;0.0195762!10752-110D5;0.0609571!10782-110G8;0.0681246!10726-110A6;0.418239!10018-101C9;0.00510534!10086-102B5;0.752194!10182-103D2;0.969062!10165-103B3;0.0119842!10499-107C4;0.00984277!10408-106B3;0.0633717!10019-101D1;0.0131956!10068-101I5;0.144881!10075-102A3;0.0644382!10077-102A5;0.172686!10727-110A7;0.274927!10775-110G1;0.0737221!10412-106B7;0.100542!12231-129F8;0.29839!12232-129F9;0.0976869!12233-129G1;0.0421173!12234-129G2;0.0401465!10414-106B9;0.0829683!10170-103B8;0.181132!10183-103D3;0.0122015!10150-102I6;0.00728427!10174-103C3;0.0122818!10155-103A2;0.00581455!10038-101F2;0.0067027!10838-111E1;0.00794063!10759-110E3;0.475159!10514-107E1;0.18112!10465-106H6;0.0687682!10691-109F7;0.034946!10843-111E6;0.00495743!10844-111E7;0.368439!11747-123G1;0.822268!11748-123G2;0.364079!11749-123G3;0.511399!11750-123G4;0.368922!11751-123G5;0.154919!11840-124H4;0.053493!11752-123G6;0.0402359!11753-123G7;0.59246!11754-123G8;0.117529!11755-123G9;0.117871!11756-123H1;0.200235!11833-124G6;0.114859!11760-123H5;0.907378!11836-124G9;0.166525!11758-123H3;0.0169393!11835-124G8;0.0819498!11762-123H7;0.258749!11838-124H2;0.922481!11757-123H2;0.411912!11759-123H4;0.117581!11761-123H6;0.0913326!11842-124H6;0.481588!11837-124H1;0.0378358!10568-108B1;0.166994!13230-141I8;0.287088!13231-141I9;0.0385806!10696-109G3;0.0497264!10493-107B7;0.189053!10494-107B8;0.0277514!10850-111F4;0.00331824!10851-111F5;0.00421998!10852-111F6;0.0572381!10853-111F7;0.0440173!10854-111F8;0.0219801!10855-111F9;0.0556144!10856-111G1;0.493379!10847-111F1;0.00681058!10846-111E9;0.593596!10848-111F2;0.00165652!10845-111E8;0.0153136!10857-111G2;0.0697167!10858-111G3;0.0415894!10156-103A3;0.101214!11901-125F2;0.00937616!11902-125F3;0.0581305!11903-125F4;0.0182865!10689-109F5;0.0424268!10648-109A9;0.00636338!10784-110H1;0.294563!10744-110C6;0.00941243!10772-110F7;0.171478!10474-106I6;0.0145003!10600-108E6;0.225398!10684-109E9;0.292654!12226-129F3;0.914403!12227-129F4;0.0357353!10508-107D4;0.0284591!10539-107G8;0.726497!10607-108F4;0.719996!10555-107I6;0.305559!10774-110F9;0.556388!10637-108I7;0.0916597!10663-109C6;0.704468!10728-110A8;0.192516!10729-110A9;0.259321!10430-106D7;0.145177!10730-110B1;0.0439292!10813-111B3;0.582708!10812-111B2;0.54623!10037-101F1;0.421862!10172-103C1;0.00905503!10163-103B1;0.00975004!10076-102A4;0.0157146!10073-102A1;0.0105779!10036-101E9;0.0430849!10195-103E6;0.0170117!10277-104E7;0.00885125!10434-106E2;0.0194365!10550-107I1;0.0222351!10545-107H5;0.0645082!10544-107H4;0.24713!10704-109H2;0.0486934!10510-107D6;0.754248!10558-107I9;0.316555!10020-101D2;0.447247!10732-110B3;0.0721071!10049-101G4;0.533741!10698-109G5;0.241075!10437-106E5;0.0710031!10417-106C3;0.0743463!10035-101E8;0.000485327!10171-103B9;0.0109151!10157-103A4;0.0100352!10034-101E7;0.0109871!10072-101I9;0.012631!10199-103F1;0.0323714!10200-103F2;0.0717289!10697-109G4;0.0262131!10723-110A3;0.492526!10179-103C8;0.068681!10160-103A7;0.00470294!10180-103C9;0.00594548!10162-103A9;0.018389!10021-101D3;0.0125165!10840-111E3;0.0967912!10706-109H4;0.144081!10033-101E6;0.491889!10032-101E5;0.00620528!10490-107B4;0.0122134!10439-106E7;0.0145266!10022-101D4;0.0287498!10176-103C5;0.0462716!10469-106I1;0.0172813!10067-101I4;0.0184907!10411-106B6;0.0839319!10471-106I3;0.291458!10030-101E3;0.0171948!10475-106I7;0.0386243!10787-110H4;0.194992!10477-106I9;0.258678!10695-109G2;0.922053!11771-123I7;0.299266!11772-123I8;0.0854799!11773-123I9;0.369824!10093-102C3;0.841303!10442-106F1;0.0323524!10442-106F1;0.0969952!10201-103F3;0.134035!10639-108I9;0.0721662!11843-124H7;0.0248858!11841-124H5;0.0197388!10693-109F9;0.0439645!10436-106E4;0.0301528!10483-107A6;0.0194101!10282-104F3;0.0260118!10023-101D5;0.0227679!10066-101I3;0.0254931!10065-101I2;0.139563!10800-110I8;0.0294172!10610-108F7;0.216224!10841-111E4;0.215116!10541-107H1;0.410291!10842-111E5;0.390512!10562-108A4;0.751084!10024-101D6;0.328271!10064-101I1;0.0567714!10609-108F6;0.0726528!10048-101G3;0.137141!10781-110G7;0.0399209!10181-103D1;0.402628!10159-103A6;0.00651753!10056-101H2;0.00426596!10737-110B8;0.0110273!10025-101D7;0.318694!10044-101F8;0.26309!10424-106D1;0.309768!10463-106H4;0.0839497!10616-108G4;0.0261847!10486-107A9;0.154179!10062-101H8;0.0843194!10202-103F4;0.141891!10158-103A5;0.0353594!10441-106E9;0.00820549!10031-101E4;0.356891!10063-101H9;0.0148372!10063-101H9;0.0505388!11763-123H8;0.0122006!11765-123I1;0.0670073!11768-123I4;0.163119!10807-111A6;0.156888!10790-110H7;0.238244!10798-110I6;0.106741!10786-110H3;0.678536!10591-108D6;0.0641284!10593-108D8;0.108093!10590-108D5;0.172128!10026-101D8;0.0345267!10096-102C6;0.200947!10168-103B6;0.736541!10154-103A1;0.00580228!10209-103G2;0.00703124!10061-101H7;0.0555337!10027-101D9;0.0452421!10043-101F7;0.474232!10783-110G9;0.196577!10028-101E1;0.853162!10060-101H6;0.264499!10203-103F5;0.222115!10059-101H5;0.0373359!10047-101G2;0.0435758!10029-101E2;0.161297!10058-101H4;0.131646!10418-106C4;0.0384813!10492-107B6;0.0729674!10694-109G1;0.0538512!10797-110I5;0.51126!10057-101H3;0.00105783!10100-102D1;0.0724254!10055-101H1;0.0314052!10204-103F6;0.0679174!10191-103E2;0.108703!10563-108A5;0.0388957
|name=CNhs11882_bu_f2
|name=CNhs11882_bu_f2
|tomtom_result=ACE2#MA0267.1;0;0.00239557;1.14029;1;7;GGCTGCC;TGCTGGT;-!GCR1#MA0304.1;0;0.00423471;2.01572;1;7;GGCTGCC;GGCTTCCA;-!Hand1::Tcfe2a#MA0092.1;1;0.00859489;4.09117;1;7;GGCTGCC;GGTCTGGCAT;+!Mafb#MA0117.1;-1;0.00930438;4.42889;1;6;GGCTGCC;GCTGACGG;+!Myf#MA0055.1;4;0.00963149;4.58459;1;7;GGCTGCC;CAGCAGCTGCTG;-!RFX1#MA0365.1;0;0.0114615;5.45565;1;7;GGCTGCC;GGTTGCTA;+!TLX1::NFIC#MA0119.1;6;0.0124456;5.92408;1;7;GGCTGCC;TTGGCATGGTGCCA;-!PHD1#MA0355.1;0;0.0132505;6.30722;1;7;GGCTGCC;TGCTGCAGGT;-!SWI5#MA0402.1;0;0.0172936;8.23177;1;7;GGCTGCC;TGCTGGTT;+!GCR2#MA0305.1;-1;0.0208376;9.91869;1;6;GGCTGCC;GCTTCCT;+
}}
}}

Latest revision as of 12:43, 7 September 2012

Full Name: CNhs11882_bu_f2

Motif matrix
POACGT
1206.61770913214423153.98362116964336816.9163309396616310.0908785631619
23.3929170354475063.3929170354475061339.571724763637141.25098097007998
30.01487.60853980461160.00.0
40.00.00.01487.6085398046116
50.00.01487.60853980461160.0
63.010110360538573875.2450542992566520.542189078238588.8111860665784
7372.35724449597791014.08715798183196.52373888065933994.64039844614314

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ACE2#MA0267.100.002395571.1402917GGCTGCCTGCTGGT-
GCR1#MA0304.100.004234712.0157217GGCTGCCGGCTTCCA-
Hand1::Tcfe2a#MA0092.110.008594894.0911717GGCTGCCGGTCTGGCAT+
Mafb#MA0117.1-10.009304384.4288916GGCTGCCGCTGACGG+
Myf#MA0055.140.009631494.5845917GGCTGCCCAGCAGCTGCTG-
RFX1#MA0365.100.01146155.4556517GGCTGCCGGTTGCTA+
TLX1::NFIC#MA0119.160.01244565.9240817GGCTGCCTTGGCATGGTGCCA-
PHD1#MA0355.100.01325056.3072217GGCTGCCTGCTGCAGGT-
SWI5#MA0402.100.01729368.2317717GGCTGCCTGCTGGTT+
GCR2#MA0305.1-10.02083769.9186916GGCTGCCGCTTCCT+
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