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MacroAPE 1083:TGACGAA,motif9: Difference between revisions

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.573778!12181-129A3;0.738783!12176-128I7;0.426202!12177-128I8;0.756531!12182-129A4;0.648203!12183-129A5;0.341635!12184-129A6;0.455162!10809-111A8;0.372584!10597-108E3;0.10368!10717-109I6;0.428574!10455-106G5;0.725284!10534-107G3;0.470543!10429-106D6;0.128803!10464-106H5;0.538038!10827-111C8;0.100429!10789-110H6;0.0766396!10828-111C9;0.283348!10788-110H5;0.563909!10792-110H9;0.177441!10765-110E9;0.105214!10829-111D1;0.366319!10830-111D2;0.335909!10831-111D3;0.0701249!10832-111D4;0.377824!10833-111D5;0.431796!10764-110E8;0.188983!10770-110F5;0.528857!10399-106A3;0.564295!10400-106A4;0.197919!10405-106A9;0.253743!10834-111D6;0.444699!10835-111D7;0.0429677!10836-111D8;0.552588!10837-111D9;0.281281!10699-109G6;0.0240695!10802-111A1;0.117899!10796-110I4;0.329889!10010-101C1;0.297843!10810-111A9;0.84651!10421-106C7;0.0407059!10708-109H6;0.511971!12235-129G3;0.643405!12236-129G4;0.0416148!12237-129G5;0.436712!10167-103B5;0.051193!10151-102I7;0.482764!10428-106D5;0.540043!10795-110I3;0.988468!10805-111A4;0.369763!10052-101G7;0.917113!10189-103D9;0.877707!10589-108D4;0.988978!10425-106D2;0.168431!10427-106D4;0.691502!10702-109G9;0.139855!10432-106D9;0.368726!10496-107C1;0.660613!10718-109I7;0.0647143!10011-101C2;0.720101!10053-101G8;0.469643!10686-109F2;0.00802194!10084-102B3;0.751444!10012-101C3;0.948755!10085-102B4;0.766099!10482-107A5;0.25894!10419-106C5;0.837935!10080-102A8;0.883839!10760-110E4;0.871195!10709-109H7;0.963038!10710-109H8;0.617045!10703-109H1;0.317261!10719-109I8;0.309313!10642-109A3;0.934894!10177-103C6;0.313378!10164-103B2;0.638148!10173-103C2;0.848318!10166-103B4;0.560748!10083-102B2;0.296235!10188-103D8;0.497528!10552-107I3;0.36163!10553-107I4;0.473888!10013-101C4;0.0968379!10536-107G5;0.697068!10618-108G6;0.496275!10423-106C9;0.385368!10785-110H2;0.349601!12238-129G6;0.402701!12239-129G7;0.0545938!12240-129G8;0.102945!10416-106C2;0.555767!10801-110I9;0.12081!10766-110F1;0.804336!10824-111C5;0.195091!10825-111C6;0.158871!10826-111C7;0.254153!10454-106G4;0.339956!10409-106B4;0.10395!10638-108I8;0.162443!10636-108I6;0.903671!10513-107D9;0.976528!10420-106C6;0.0815824!10082-102B1;0.00171187!10014-101C5;0.198598!10070-101I7;0.397403!10452-106G2;0.824323!10453-106G3;0.0587005!10449-106F8;0.47369!10042-101F6;0.83699!10069-101I6;0.593668!10193-103E4;0.484666!10631-108I1;0.998368!10438-106E6;0.312099!10488-107B2;0.074366!10196-103E7;0.525087!10071-101I8;0.263266!10071-101I8;0.446553!10041-101F5;0.259059!10451-106G1;0.791301!10450-106F9;0.541831!10604-108F1;0.0127478!10605-108F2;0.029429!10606-108F3;0.145428!10603-108E9;0.0175315!10497-107C2;0.192509!10448-106F7;0.991654!10643-109A4;0.595333!10426-106D3;0.759564!10431-106D8;0.0124426!10197-103E8;0.882676!10443-106F2;0.287054!10815-111B5;0.385006!10816-111B6;0.812616!10817-111B7;0.288534!10015-101C6;0.783128!10410-106B5;0.950108!10054-101G9;0.735324!10758-110E2;0.408676!10711-109H9;0.870199!10040-101F4;0.682884!10470-106I2;0.839863!10415-106C1;0.65746!10198-103E9;0.528299!10614-108G2;0.723198!10612-108F9;0.678442!10549-107H9;0.993625!10615-108G3;0.0748716!10487-107B1;0.676684!10433-106E1;0.00871436!10688-109F4;0.00785496!10444-106F3;0.00960075!10444-106F3;0.579759!10485-107A8;0.557457!10413-106B8;0.113698!10175-103C4;0.528989!10161-103A8;0.383563!12131-128D7;0.56437!10624-108H3;0.0535894!10712-109I1;0.84311!10205-103F7;0.245332!10206-103F8;0.423648!10207-103F9;0.53789!10050-101G5;0.181712!10051-101G6;0.984066!10016-101C7;0.868931!10046-101G1;0.837315!10778-110G4;0.560817!10633-108I3;0.265028!10818-111B8;0.461503!10819-111B9;0.119248!10820-111C1;0.141817!10484-107A7;0.143992!10808-111A7;0.64836!10169-103B7;0.765881!10153-102I9;0.982138!13425-144D5;0.462767!13433-144E4;0.0302021!13437-144E8;0.0596392!11904-125F5;0.0350992!11905-125F6;8.65339e-05!10039-101F3;7.09822e-08!10791-110H8;0.824795!10017-101C8;0.777911!10045-101F9;0.069669!10509-107D5;0.0453951!10839-111E2;0.218591!10692-109F8;0.146171!10079-102A7;0.642247!10078-102A6;0.519283!10721-110A1;0.919095!10569-108B2;0.40506!10570-108B3;0.469011!10571-108B4;0.130938!10647-109A8;0.467551!10752-110D5;0.990969!10782-110G8;0.812458!10726-110A6;0.179583!10018-101C9;0.668416!10086-102B5;0.268422!10182-103D2;0.985241!10165-103B3;0.431776!10499-107C4;0.970965!10408-106B3;0.00288422!10019-101D1;0.711865!10068-101I5;0.860396!10075-102A3;0.697413!10077-102A5;0.69336!10727-110A7;0.771415!10775-110G1;0.0838409!10412-106B7;0.460277!12231-129F8;0.00970989!12232-129F9;0.00498749!12233-129G1;0.0420197!12234-129G2;0.0270037!10414-106B9;0.0198895!10170-103B8;0.619488!10183-103D3;0.491994!10150-102I6;0.629171!10174-103C3;0.871696!10155-103A2;0.692285!10038-101F2;0.617931!10838-111E1;0.947401!10759-110E3;0.211141!10514-107E1;0.628315!10465-106H6;0.637453!10691-109F7;0.40643!10843-111E6;0.368865!10844-111E7;0.13305!11747-123G1;0.14611!11748-123G2;0.433142!11749-123G3;0.693801!11750-123G4;0.30737!11751-123G5;0.670249!11840-124H4;0.370217!11752-123G6;0.343884!11753-123G7;0.479337!11754-123G8;0.975681!11755-123G9;0.772053!11756-123H1;0.927866!11833-124G6;0.781244!11760-123H5;0.89614!11836-124G9;0.481825!11758-123H3;0.939599!11835-124G8;0.137876!11762-123H7;0.342351!11838-124H2;0.577274!11757-123H2;0.245632!11759-123H4;0.537905!11761-123H6;0.801995!11842-124H6;0.87859!11837-124H1;0.92697!10568-108B1;0.474372!13230-141I8;0.0546886!13231-141I9;0.176489!10696-109G3;0.206212!10493-107B7;0.824375!10494-107B8;0.14816!10850-111F4;0.375804!10851-111F5;0.296862!10852-111F6;0.00553204!10853-111F7;0.000313576!10854-111F8;0.0581615!10855-111F9;0.0824435!10856-111G1;0.78201!10847-111F1;0.0438006!10846-111E9;0.00984406!10848-111F2;0.100974!10845-111E8;0.0471152!10857-111G2;0.329808!10858-111G3;0.210582!10156-103A3;0.175862!11901-125F2;0.755066!11902-125F3;0.0815539!11903-125F4;0.019784!10689-109F5;0.0875044!10648-109A9;0.0294775!10784-110H1;0.0757196!10744-110C6;0.0923556!10772-110F7;0.00014429!10474-106I6;0.160842!10600-108E6;0.467506!10684-109E9;0.681512!12226-129F3;0.0263634!12227-129F4;0.00839158!10508-107D4;0.324952!10539-107G8;0.51235!10607-108F4;0.550661!10555-107I6;0.0951361!10774-110F9;0.330114!10637-108I7;0.0667087!10663-109C6;0.79064!10728-110A8;0.594798!10729-110A9;0.871293!10430-106D7;0.565682!10730-110B1;0.34399!10813-111B3;0.737459!10812-111B2;0.227794!10037-101F1;0.338263!10172-103C1;0.962275!10163-103B1;0.642145!10076-102A4;0.808615!10073-102A1;0.658551!10036-101E9;0.245563!10195-103E6;0.959035!10277-104E7;0.7187!10434-106E2;0.402015!10550-107I1;0.386669!10545-107H5;0.914345!10544-107H4;0.114352!10704-109H2;0.398554!10510-107D6;0.732616!10558-107I9;0.281485!10020-101D2;0.00864645!10732-110B3;0.753297!10049-101G4;0.256135!10698-109G5;0.668848!10437-106E5;0.985311!10417-106C3;0.555161!10035-101E8;0.100045!10171-103B9;0.962461!10157-103A4;0.707515!10034-101E7;0.931277!10072-101I9;0.97255!10199-103F1;0.167893!10200-103F2;0.211863!10697-109G4;0.771221!10723-110A3;0.25564!10179-103C8;0.879794!10160-103A7;0.285841!10180-103C9;0.37777!10162-103A9;0.349589!10021-101D3;0.685062!10840-111E3;0.97245!10706-109H4;0.586108!10033-101E6;0.68479!10032-101E5;0.959196!10490-107B4;0.936512!10439-106E7;0.220583!10022-101D4;0.0773563!10176-103C5;0.622148!10469-106I1;0.582119!10067-101I4;0.515115!10411-106B6;0.129429!10471-106I3;0.497715!10030-101E3;0.687513!10475-106I7;0.291804!10787-110H4;0.00593897!10477-106I9;0.233869!10695-109G2;0.010598!11771-123I7;0.188349!11772-123I8;0.13895!11773-123I9;0.043217!10093-102C3;0.0276112!10442-106F1;0.0654226!10442-106F1;0.574436!10201-103F3;0.510038!10639-108I9;0.875218!11843-124H7;0.179829!11841-124H5;0.195351!10693-109F9;0.130757!10436-106E4;0.0595116!10483-107A6;0.16245!10282-104F3;0.86537!10023-101D5;0.930606!10066-101I3;0.695143!10065-101I2;0.189856!10800-110I8;0.386729!10610-108F7;0.223389!10841-111E4;0.2327!10541-107H1;0.228265!10842-111E5;0.531228!10562-108A4;0.0649606!10024-101D6;0.841424!10064-101I1;0.881729!10609-108F6;0.0190497!10048-101G3;0.813922!10781-110G7;0.987048!10181-103D1;0.104761!10159-103A6;0.709729!10056-101H2;0.874449!10737-110B8;0.366126!10025-101D7;0.664227!10044-101F8;0.668588!10424-106D1;0.286661!10463-106H4;0.883095!10616-108G4;0.0587542!10486-107A9;0.00407378!10062-101H8;0.111468!10202-103F4;0.903061!10158-103A5;0.200934!10441-106E9;0.453429!10031-101E4;0.00371338!10063-101H9;0.908246!10063-101H9;0.181416!11763-123H8;0.159329!11765-123I1;0.124092!11768-123I4;0.364733!10807-111A6;0.0955083!10790-110H7;0.0519923!10798-110I6;0.026412!10786-110H3;0.000937434!10591-108D6;0.167796!10593-108D8;0.153448!10590-108D5;0.027886!10026-101D8;0.132074!10096-102C6;0.734029!10168-103B6;0.539206!10154-103A1;0.795437!10209-103G2;0.62564!10061-101H7;0.892305!10027-101D9;0.135388!10043-101F7;0.717719!10783-110G9;0.859391!10028-101E1;0.00364023!10060-101H6;0.221979!10203-103F5;0.622824!10059-101H5;0.64987!10047-101G2;0.666219!10029-101E2;0.975532!10058-101H4;0.980354!10418-106C4;0.446065!10492-107B6;0.429544!10694-109G1;0.0238709!10797-110I5;0.340022!10057-101H3;0.948744!10100-102D1;0.359429!10055-101H1;0.423346!10204-103F6;0.0666518!10191-103E2;0.959382!10563-108A5;0.778579
|name=TGACGAA,motif9,CNhs13471,T:1511.0(27.85%),B:11378.7(14.12%),P:1e-151
|name=TGACGAA,motif9,CNhs13471,T:1511.0(27.85%),B:11378.7(14.12%),P:1e-151
|tomtom_result=TGA1A#MA0129.1;0;0.00140348;0.668058;1;7;TGACGAA;TGACGTA;-!Deaf1#MA0185.1;-1;0.00249657;1.18837;1;6;TGACGAA;CACGAA;-!CST6#MA0286.1;1;0.00424731;2.02172;1;7;TGACGAA;ATGACGTAA;+!NFE2L2#MA0150.1;1;0.0100882;4.80198;1;7;TGACGAA;ATGACTCAGCA;+!ttx-3::ceh-10#MA0263.1;1;0.0106515;5.07011;1;7;TGACGAA;TTAACGAAGCCAAT;-!CREB1#MA0018.2;5;0.0106727;5.08018;1;7;TGACGAA;CCTGGTGACGTC;+!SPIB#MA0081.1;0;0.0132384;6.30148;1;7;TGACGAA;AGAGGAA;+!AP1#MA0099.2;0;0.0132384;6.30148;1;7;TGACGAA;TGACTCA;+!bZIP910#MA0096.1;1;0.0138073;6.57229;1;6;TGACGAA;CTGACGT;+!SPT2#MA0387.1;3;0.0141765;6.748;1;7;TGACGAA;AATTAAAGAA;+!FHL1#MA0295.1;-1;0.0161981;7.71029;1;6;TGACGAA;GACGCAAA;+!CREB1#MA0018.2;0;0.0168039;7.99864;1;7;TGACGAA;TGACGTCA;+
}}
}}

Latest revision as of 12:52, 7 September 2012

Full Name: TGACGAA,motif9,CNhs13471,T:1511.0(27.85%),B:11378.7(14.12%),P:1e-151

Motif matrix
POACGT
11.5111.5111.5111506.467
21.5111.5111506.4671.511
31506.4671.5111.5111.511
41.5111506.4671.5111.511
51.5111.5111335.724172.254
61358.389149.5891.5111.511
71506.4671.5111.5111.511

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
TGA1A#MA0129.100.001403480.66805817TGACGAATGACGTA-
Deaf1#MA0185.1-10.002496571.1883716TGACGAACACGAA-
CST6#MA0286.110.004247312.0217217TGACGAAATGACGTAA+
NFE2L2#MA0150.110.01008824.8019817TGACGAAATGACTCAGCA+
ttx-3::ceh-10#MA0263.110.01065155.0701117TGACGAATTAACGAAGCCAAT-
CREB1#MA0018.250.01067275.0801817TGACGAACCTGGTGACGTC+
SPIB#MA0081.100.01323846.3014817TGACGAAAGAGGAA+
AP1#MA0099.200.01323846.3014817TGACGAATGACTCA+
bZIP910#MA0096.110.01380736.5722916TGACGAACTGACGT+
SPT2#MA0387.130.01417656.74817TGACGAAAATTAAAGAA+
FHL1#MA0295.1-10.01619817.7102916TGACGAAGACGCAAA+
CREB1#MA0018.200.01680397.9986417TGACGAATGACGTCA+
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