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MacroAPE 1083:CNhs11789 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;233.60016072609113;443.6357980933777;501.8108960544922;670.5936998213148!2;23.56807582475914;1714.4270518210444;13.781964067814666;97.863462...")
 
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!10455-106G5;0.0454082!10534-107G3;0.181628!10429-106D6;0.187888!10464-106H5;0.09577!10827-111C8;0.112787!10789-110H6;0.492693!10828-111C9;0.16328!10788-110H5;0.113238!10792-110H9;0.182847!10765-110E9;0.441788!10829-111D1;0.700086!10830-111D2;0.810187!10831-111D3;0.0521148!10832-111D4;0.167875!10833-111D5;0.166326!10764-110E8;0.278146!10770-110F5;0.132069!10399-106A3;0.59404!10400-106A4;0.342231!10405-106A9;0.309923!10834-111D6;0.26851!10835-111D7;0.555013!10836-111D8;0.449838!10837-111D9;0.401197!10699-109G6;0.442029!10802-111A1;0.190357!10796-110I4;0.11185!10010-101C1;0.277568!10810-111A9;0.00196773!10421-106C7;0.0762125!10708-109H6;0.407236!12235-129G3;0.13668!12236-129G4;0.23988!12237-129G5;0.846372!10167-103B5;0.41099!10151-102I7;0.650541!10428-106D5;0.579961!10795-110I3;0.12811!10805-111A4;0.277818!10052-101G7;0.00954529!10189-103D9;0.0329327!10589-108D4;0.0174973!10425-106D2;0.103588!10427-106D4;0.0437462!10702-109G9;0.133481!10432-106D9;0.250053!10496-107C1;0.0361232!10718-109I7;0.268599!10011-101C2;0.496247!10053-101G8;0.0252478!10686-109F2;0.75389!10084-102B3;0.94446!10012-101C3;0.276728!10085-102B4;0.354125!10482-107A5;0.912619!10419-106C5;0.0841606!10080-102A8;0.0194195!10760-110E4;0.0233877!10709-109H7;0.0470075!10710-109H8;0.0881267!10703-109H1;0.0260883!10719-109I8;0.0788557!10642-109A3;0.14896!10177-103C6;0.0357128!10164-103B2;0.391342!10173-103C2;0.475449!10166-103B4;0.961843!10083-102B2;0.811291!10188-103D8;0.748236!10552-107I3;0.347016!10553-107I4;0.0563603!10013-101C4;0.007558!10536-107G5;0.0645614!10618-108G6;0.0359889!10423-106C9;0.0356736!10785-110H2;0.0492153!12238-129G6;0.037246!12239-129G7;0.0220744!12240-129G8;0.678981!10416-106C2;0.243843!10801-110I9;0.441933!10766-110F1;0.418986!10824-111C5;0.309675!10825-111C6;0.219801!10826-111C7;0.252719!10454-106G4;0.225221!10409-106B4;0.364134!10638-108I8;0.321948!10636-108I6;0.0202078!10513-107D9;0.00125167!10420-106C6;0.0616063!10082-102B1;0.0414334!10014-101C5;0.0202175!10070-101I7;0.00915437!10452-106G2;0.0411535!10453-106G3;0.193225!10449-106F8;0.200219!10042-101F6;0.209766!10069-101I6;0.112559!10193-103E4;0.00660073!10631-108I1;0.27273!10438-106E6;0.233085!10488-107B2;0.0317539!10196-103E7;0.130264!10071-101I8;0.0461491!10071-101I8;0.026323!10041-101F5;0.763511!10451-106G1;0.0250754!10450-106F9;0.00820277!10604-108F1;0.0251066!10605-108F2;0.0864431!10606-108F3;0.143268!10603-108E9;0.106056!10497-107C2;0.0821878!10448-106F7;0.0242101!10643-109A4;0.0495321!10426-106D3;0.0443248!10431-106D8;0.0374513!10197-103E8;0.0189889!10443-106F2;0.013438!10815-111B5;0.461419!10816-111B6;0.10736!10817-111B7;0.0695255!10015-101C6;0.0987382!10410-106B5;0.0348484!10054-101G9;0.0288681!10758-110E2;0.0358389!10711-109H9;0.0717055!10040-101F4;0.0609922!10470-106I2;0.608914!10415-106C1;0.00454885!10198-103E9;0.00466751!10614-108G2;0.0190759!10612-108F9;0.0215502!10549-107H9;0.049869!10615-108G3;0.0560944!10487-107B1;0.102599!10433-106E1;0.311297!10688-109F4;0.218778!10444-106F3;0.0162303!10444-106F3;0.242018!10485-107A8;0.260814!10413-106B8;0.189093!10175-103C4;0.106451!10161-103A8;0.269526!12131-128D7;0.252453!10624-108H3;0.0941912!10712-109I1;0.0234296!10205-103F7;0.426846!10206-103F8;0.0102816!10207-103F9;0.0221826!10050-101G5;0.0113228!10051-101G6;0.0169797!10016-101C7;0.00906793!10046-101G1;0.00667176!10778-110G4;0.0528072!10633-108I3;0.63644!10818-111B8;0.0809002!10819-111B9;0.430846!10820-111C1;0.433839!10484-107A7;0.416379!10808-111A7;0.162057!10169-103B7;0.244389!10153-102I9;0.515356!13425-144D5;0.416876!13433-144E4;0.00599442!13437-144E8;0.00366634!11904-125F5;0.0073574!11905-125F6;0.324672!10039-101F3;0.143178!10791-110H8;0.551158!10017-101C8;0.0149526!10045-101F9;0.0310552!10509-107D5;0.119598!10839-111E2;0.0960777!10692-109F8;0.320567!10079-102A7;0.00946265!10078-102A6;0.0137458!10721-110A1;0.0139653!10569-108B2;0.0533206!10570-108B3;0.0409973!10571-108B4;0.114571!10647-109A8;0.124365!10752-110D5;0.0286478!10782-110G8;0.110663!10726-110A6;0.660683!10018-101C9;0.0592054!10086-102B5;0.000410872!10182-103D2;6.2691e-05!10165-103B3;0.284485!10499-107C4;0.245139!10408-106B3;0.0796058!10019-101D1;0.324177!10068-101I5;0.0194046!10075-102A3;0.0663057!10077-102A5;0.0185817!10727-110A7;0.0520902!10775-110G1;0.123334!10412-106B7;0.131256!12231-129F8;0.0912059!12232-129F9;0.00720904!12233-129G1;0.0002443!12234-129G2;0.000518624!10414-106B9;0.0223732!10170-103B8;0.0411875!10183-103D3;0.726137!10150-102I6;0.633409!10174-103C3;0.613747!10155-103A2;0.0684247!10038-101F2;0.155559!10838-111E1;0.110688!10759-110E3;0.0628607!10514-107E1;0.00808937!10465-106H6;0.00690959!10691-109F7;0.0105997!10843-111E6;0.907132!10844-111E7;0.062314!11747-123G1;0.102346!11748-123G2;0.117901!11749-123G3;0.722241!11750-123G4;0.0332826!11751-123G5;0.116946!11840-124H4;0.100269!11752-123G6;0.0306848!11753-123G7;0.46413!11754-123G8;0.128125!11755-123G9;0.234251!11756-123H1;0.991335!11833-124G6;0.918735!11760-123H5;0.706285!11836-124G9;0.863345!11758-123H3;0.0594779!11835-124G8;0.153244!11762-123H7;0.270247!11838-124H2;0.296755!11757-123H2;0.272002!11759-123H4;0.377825!11761-123H6;0.417601!11842-124H6;0.789403!11837-124H1;0.365741!10568-108B1;0.356197!13230-141I8;0.601774!13231-141I9;0.0358878!10696-109G3;0.043198!10493-107B7;0.778059!10494-107B8;0.0915988!10850-111F4;0.00536406!10851-111F5;0.0471647!10852-111F6;0.105026!10853-111F7;0.123009!10854-111F8;0.0237441!10855-111F9;0.0847322!10856-111G1;0.787876!10847-111F1;0.0502788!10846-111E9;0.0843142!10848-111F2;0.0442916!10845-111E8;0.214315!10857-111G2;0.0192505!10858-111G3;0.168292!10156-103A3;0.104138!11901-125F2;0.563852!11902-125F3;0.375395!11903-125F4;0.261026!10689-109F5;0.238065!10648-109A9;0.00438884!10784-110H1;0.237748!10744-110C6;0.114473!10772-110F7;0.444465!10474-106I6;0.246757!10600-108E6;0.715108!10684-109E9;0.038644!12226-129F3;0.436687!12227-129F4;0.0851591!10508-107D4;0.624386!10539-107G8;0.119189!10607-108F4;0.228475!10555-107I6;0.218744!10774-110F9;0.150157!10637-108I7;0.093822!10663-109C6;0.0486781!10728-110A8;0.255672!10729-110A9;0.0615577!10430-106D7;0.514092!10730-110B1;0.0286581!10813-111B3;0.15659!10812-111B2;0.358522!10037-101F1;0.407334!10172-103C1;0.457063!10163-103B1;0.880753!10076-102A4;0.557234!10073-102A1;0.65111!10036-101E9;0.436683!10195-103E6;0.537693!10277-104E7;0.486226!10434-106E2;0.152716!10550-107I1;0.0181154!10545-107H5;0.0900041!10544-107H4;0.0416241!10704-109H2;0.00839961!10510-107D6;0.532981!10558-107I9;0.0259122!10020-101D2;0.0948708!10732-110B3;0.069395!10049-101G4;0.461142!10698-109G5;0.432129!10437-106E5;0.0667771!10417-106C3;0.00384969!10035-101E8;0.0819144!10171-103B9;0.590842!10157-103A4;0.754777!10034-101E7;0.602011!10072-101I9;0.548292!10199-103F1;0.548699!10200-103F2;0.0264092!10697-109G4;0.012664!10723-110A3;0.294978!10179-103C8;0.00646256!10160-103A7;0.398042!10180-103C9;0.519806!10162-103A9;0.672018!10021-101D3;0.800342!10840-111E3;0.0353971!10706-109H4;0.215122!10033-101E6;0.587111!10032-101E5;0.32327!10490-107B4;0.509209!10439-106E7;0.0862414!10022-101D4;0.104304!10176-103C5;0.0364094!10469-106I1;0.599225!10067-101I4;0.100242!10411-106B6;0.162863!10471-106I3;0.198014!10030-101E3;0.15709!10475-106I7;0.0345887!10787-110H4;0.031383!10477-106I9;0.441098!10695-109G2;0.248335!11771-123I7;0.834004!11772-123I8;0.100681!11773-123I9;0.651186!10093-102C3;0.189232!10442-106F1;0.0548067!10442-106F1;0.0679621!10201-103F3;0.0377691!10639-108I9;0.0312643!11843-124H7;0.000339846!11841-124H5;0.13141!10693-109F9;0.0679925!10436-106E4;0.00265269!10483-107A6;0.219913!10282-104F3;0.233833!10023-101D5;0.00190464!10066-101I3;0.00174189!10065-101I2;0.0228466!10800-110I8;0.0285484!10610-108F7;0.00711179!10841-111E4;0.033006!10541-107H1;0.0959619!10842-111E5;0.00264155!10562-108A4;0.0621331!10024-101D6;0.00593198!10064-101I1;0.0048239!10609-108F6;0.0130927!10048-101G3;0.0232467!10781-110G7;0.0445775!10181-103D1;0.121221!10159-103A6;0.100906!10056-101H2;0.137705!10737-110B8;0.0895424!10025-101D7;0.867696!10044-101F8;0.0183898!10424-106D1;0.0217103!10463-106H4;0.178402!10616-108G4;0.0184809!10486-107A9;0.0276735!10062-101H8;0.13248!10202-103F4;0.0663067!10158-103A5;0.0396978!10441-106E9;0.0846278!10031-101E4;0.063452!10063-101H9;0.427002!10063-101H9;0.581066!11763-123H8;0.0189465!11765-123I1;0.0711063!11768-123I4;0.0292747!10807-111A6;0.00788342!10790-110H7;0.0328694!10798-110I6;0.0558181!10786-110H3;0.375146!10591-108D6;0.00574561!10593-108D8;0.0287487!10590-108D5;0.000937562!10026-101D8;0.0315218!10096-102C6;0.0141208!10168-103B6;0.964228!10154-103A1;0.221738!10209-103G2;0.251827!10061-101H7;0.01291!10027-101D9;0.0244519!10043-101F7;0.640462!10783-110G9;0.105597!10028-101E1;0.00824971!10060-101H6;0.0879899!10203-103F5;0.0759697!10059-101H5;0.0180798!10047-101G2;0.0260565!10029-101E2;0.0386559!10058-101H4;0.0242703!10418-106C4;0.0313213!10492-107B6;0.00797577!10694-109G1;0.112868!10797-110I5;0.969851!10057-101H3;0.072128!10100-102D1;0.022627!10055-101H1;0.100024!10204-103F6;0.156299!10191-103E2;0.132632!10563-108A5;0.00677711
|name=CNhs11789_bl_f2
|name=CNhs11789_bl_f2
|tomtom_result=PPARG::RXRA#MA0065.2;3;0.00412806;1.96496;1;9;TCTCTGGCC;TGACCTTTGCCCTAC;-!Trl#MA0205.1;2;0.00446169;2.12376;1;8;TCTCTGGCC;TTGCTCTCTC;+!Hand1::Tcfe2a#MA0092.1;0;0.00572938;2.72718;1;9;TCTCTGGCC;GGTCTGGCAT;+!HNF4A#MA0114.1;3;0.00647174;3.08055;1;9;TCTCTGGCC;TGACCTTTGGCCT;-!BAS1#MA0278.1;8;0.00898471;4.27672;1;9;TCTCTGGCC;TTGACTTGACTCTGGCTGTGC;-!CHA4#MA0283.1;0;0.0106588;5.07361;1;8;TCTCTGGCC;TCTCCGCC;-
}}
}}

Latest revision as of 13:32, 7 September 2012

Full Name: CNhs11789_bl_f2

Motif matrix
POACGT
1233.60016072609113443.6357980933777501.8108960544922670.5936998213148
223.568075824759141714.427051821044413.78196406781466697.86346298165748
3470.3780072383839330.98545146914172.9549689477455521045.322127040004
40.01849.64055469527580.00.0
50.00.00.01849.6405546952758
63.24813342232629453.24813342232629451839.89615442829683.2481334223262945
7335.65254490180985516.9186680733193540.7227827591169456.34655896103015
8304.178167173147531137.8546026823797279.0374852232249128.57029961652216
9468.18623819259483666.153143933140962.19148381809505653.1096887514441

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
PPARG::RXRA#MA0065.230.004128061.9649619TCTCTGGCCTGACCTTTGCCCTAC-
Trl#MA0205.120.004461692.1237618TCTCTGGCCTTGCTCTCTC+
Hand1::Tcfe2a#MA0092.100.005729382.7271819TCTCTGGCCGGTCTGGCAT+
HNF4A#MA0114.130.006471743.0805519TCTCTGGCCTGACCTTTGGCCT-
BAS1#MA0278.180.008984714.2767219TCTCTGGCCTTGACTTGACTCTGGCTGTGC-
CHA4#MA0283.100.01065885.0736118TCTCTGGCCTCTCCGCC-
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