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MacroAPE 1083:Motif CATGNT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;2592;0;0!02;2592;0;0;0!03;0;0;0;2592!04;0;0;2592;0!05;648;648;648;648!06;0;0;0;2592 |macroape_1083_sample_pvalues=11376-118A8;0.475546!1...")
 
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7415!10789-110H6;0.159576!10828-111C9;0.485995!10788-110H5;0.552822!10792-110H9;0.417319!10765-110E9;0.307829!10829-111D1;0.490921!10830-111D2;0.309595!10831-111D3;0.921463!10832-111D4;0.53455!10833-111D5;0.723282!10764-110E8;0.544106!10770-110F5;0.917294!10399-106A3;0.225221!10400-106A4;0.686696!10405-106A9;0.602947!10834-111D6;0.647892!10835-111D7;0.243831!10836-111D8;0.457623!10837-111D9;0.62234!10699-109G6;0.74564!10802-111A1;0.964714!10796-110I4;0.885576!10010-101C1;0.500092!10810-111A9;0.921886!10421-106C7;0.869044!10708-109H6;0.880784!12235-129G3;0.715579!12236-129G4;0.734527!12237-129G5;0.333112!10167-103B5;0.333811!10151-102I7;0.496167!10428-106D5;0.27738!10795-110I3;0.538726!10805-111A4;0.359112!10052-101G7;0.887921!10189-103D9;0.826702!10589-108D4;0.897104!10425-106D2;0.283799!10427-106D4;0.574855!10702-109G9;0.543794!10432-106D9;0.570197!10496-107C1;0.710615!10718-109I7;0.940636!10011-101C2;0.648873!10053-101G8;0.974838!10686-109F2;0.515978!10084-102B3;0.14371!10012-101C3;0.725483!10085-102B4;0.521838!10482-107A5;0.619019!10419-106C5;0.857828!10080-102A8;0.182663!10760-110E4;0.485263!10709-109H7;0.350044!10710-109H8;0.593976!10703-109H1;0.789081!10719-109I8;0.55529!10642-109A3;0.994691!10177-103C6;0.513395!10164-103B2;0.367203!10173-103C2;0.368933!10166-103B4;0.200898!10083-102B2;0.179366!10188-103D8;0.418131!10552-107I3;0.675424!10553-107I4;0.384272!10013-101C4;0.708124!10536-107G5;0.869331!10618-108G6;0.588445!10423-106C9;0.581286!10785-110H2;0.88391!12238-129G6;0.856018!12239-129G7;0.412287!12240-129G8;0.89514!10416-106C2;0.331657!10801-110I9;0.070247!10766-110F1;0.152735!10824-111C5;0.682751!10825-111C6;0.860084!10826-111C7;0.874063!10454-106G4;0.846345!10409-106B4;0.598908!10638-108I8;0.889607!10636-108I6;0.643875!10513-107D9;0.581885!10420-106C6;0.361404!10082-102B1;0.640035!10014-101C5;0.330193!10070-101I7;0.849592!10452-106G2;0.926159!10453-106G3;0.600853!10449-106F8;0.782541!10042-101F6;0.755008!10069-101I6;0.43028!10193-103E4;0.580741!10631-108I1;0.60021!10438-106E6;0.499914!10488-107B2;0.854665!10196-103E7;0.475615!10071-101I8;0.917861!10071-101I8;0.726046!10041-101F5;0.561118!10451-106G1;0.595014!10450-106F9;0.998501!10604-108F1;0.58968!10605-108F2;0.507435!10606-108F3;0.973386!10603-108E9;0.498906!10497-107C2;0.430703!10448-106F7;0.933877!10643-109A4;0.812369!10426-106D3;0.183332!10431-106D8;0.905021!10197-103E8;0.844531!10443-106F2;0.555875!10815-111B5;0.866444!10816-111B6;0.657497!10817-111B7;0.963467!10015-101C6;0.64967!10410-106B5;0.669528!10054-101G9;0.76786!10758-110E2;0.968158!10711-109H9;0.664039!10040-101F4;0.686848!10470-106I2;0.552054!10415-106C1;0.84035!10198-103E9;0.576044!10614-108G2;0.787241!10612-108F9;0.0972071!10549-107H9;0.945696!10615-108G3;0.776164!10487-107B1;0.759058!10433-106E1;0.38298!10688-109F4;0.811126!10444-106F3;0.612999!10444-106F3;0.221379!10485-107A8;0.288486!10413-106B8;0.995089!10175-103C4;0.753535!10161-103A8;0.341516!12131-128D7;0.183715!10624-108H3;0.0501064!10712-109I1;0.905191!10205-103F7;0.171431!10206-103F8;0.994847!10207-103F9;0.927023!10050-101G5;0.588647!10051-101G6;0.468263!10016-101C7;0.52311!10046-101G1;0.908813!10778-110G4;0.821663!10633-108I3;0.809578!10818-111B8;0.790848!10819-111B9;0.35805!10820-111C1;0.341631!10484-107A7;0.406759!10808-111A7;0.500278!10169-103B7;0.160647!10153-102I9;0.380367!13425-144D5;0.268128!13433-144E4;0.4486!13437-144E8;0.458161!11904-125F5;0.416978!11905-125F6;0.175025!10039-101F3;0.113065!10791-110H8;0.568698!10017-101C8;0.423549!10045-101F9;0.112635!10509-107D5;0.830239!10839-111E2;0.828908!10692-109F8;0.464064!10079-102A7;0.591262!10078-102A6;0.653459!10721-110A1;0.477902!10569-108B2;0.474489!10570-108B3;0.209205!10571-108B4;0.0634977!10647-109A8;0.296271!10752-110D5;0.303357!10782-110G8;0.670701!10726-110A6;0.741027!10018-101C9;0.853139!10086-102B5;0.00819128!10182-103D2;0.0371309!10165-103B3;0.331101!10499-107C4;0.296286!10408-106B3;0.738342!10019-101D1;0.632472!10068-101I5;0.631398!10075-102A3;0.65455!10077-102A5;0.767119!10727-110A7;0.664775!10775-110G1;0.41564!10412-106B7;0.548303!12231-129F8;0.151568!12232-129F9;0.416245!12233-129G1;0.967527!12234-129G2;0.988326!10414-106B9;0.830274!10170-103B8;0.296282!10183-103D3;0.467938!10150-102I6;0.455658!10174-103C3;0.310475!10155-103A2;0.406919!10038-101F2;0.292588!10838-111E1;0.497552!10759-110E3;0.554339!10514-107E1;0.949344!10465-106H6;0.724447!10691-109F7;0.519176!10843-111E6;0.197877!10844-111E7;0.907062!11747-123G1;0.435349!11748-123G2;0.290899!11749-123G3;0.60933!11750-123G4;0.271289!11751-123G5;0.177991!11840-124H4;0.21273!11752-123G6;0.120536!11753-123G7;0.200429!11754-123G8;0.427569!11755-123G9;0.570228!11756-123H1;0.632625!11833-124G6;0.340256!11760-123H5;0.827378!11836-124G9;0.836609!11758-123H3;0.608091!11835-124G8;0.209809!11762-123H7;0.386266!11838-124H2;0.765841!11757-123H2;0.580561!11759-123H4;0.170824!11761-123H6;0.264301!11842-124H6;0.640149!11837-124H1;0.521798!10568-108B1;0.522391!13230-141I8;0.728367!13231-141I9;0.485659!10696-109G3;0.49669!10493-107B7;0.141969!10494-107B8;0.798719!10850-111F4;0.382072!10851-111F5;0.785501!10852-111F6;0.164643!10853-111F7;0.194542!10854-111F8;0.708528!10855-111F9;0.386207!10856-111G1;0.330702!10847-111F1;0.826515!10846-111E9;0.703365!10848-111F2;0.32866!10845-111E8;0.429851!10857-111G2;0.854824!10858-111G3;0.500577!10156-103A3;0.575123!11901-125F2;0.301559!11902-125F3;0.459727!11903-125F4;0.499336!10689-109F5;0.553209!10648-109A9;0.833722!10784-110H1;0.327154!10744-110C6;0.298076!10772-110F7;0.171284!10474-106I6;0.560086!10600-108E6;0.658277!10684-109E9;0.698651!12226-129F3;0.250726!12227-129F4;0.280948!10508-107D4;0.500443!10539-107G8;0.315336!10607-108F4;0.359258!10555-107I6;0.826009!10774-110F9;0.508562!10637-108I7;0.619809!10663-109C6;0.0665273!10728-110A8;0.200927!10729-110A9;0.476804!10430-106D7;0.540864!10730-110B1;0.636114!10813-111B3;0.213688!10812-111B2;0.777628!10037-101F1;0.128879!10172-103C1;0.540839!10163-103B1;0.416879!10076-102A4;0.23973!10073-102A1;0.569166!10036-101E9;0.487116!10195-103E6;0.504653!10277-104E7;0.486459!10434-106E2;0.111515!10550-107I1;0.603584!10545-107H5;0.582314!10544-107H4;0.402546!10704-109H2;0.713882!10510-107D6;0.96051!10558-107I9;0.0431621!10020-101D2;0.45344!10732-110B3;0.57115!10049-101G4;0.401851!10698-109G5;0.00649426!10437-106E5;0.827161!10417-106C3;0.203835!10035-101E8;0.323331!10171-103B9;0.537305!10157-103A4;0.437203!10034-101E7;0.296641!10072-101I9;0.491672!10199-103F1;0.435749!10200-103F2;0.0577068!10697-109G4;0.542357!10723-110A3;0.398299!10179-103C8;0.883527!10160-103A7;0.51968!10180-103C9;0.456552!10162-103A9;0.707766!10021-101D3;0.277057!10840-111E3;0.765722!10706-109H4;0.89634!10033-101E6;0.936812!10032-101E5;0.514028!10490-107B4;0.587418!10439-106E7;0.642849!10022-101D4;0.645458!10176-103C5;0.724371!10469-106I1;0.360636!10067-101I4;0.515088!10411-106B6;0.611601!10471-106I3;0.401412!10030-101E3;0.96127!10475-106I7;0.874241!10787-110H4;0.913094!10477-106I9;0.845399!10695-109G2;0.243825!11771-123I7;0.141417!11772-123I8;0.176639!11773-123I9;0.328826!10093-102C3;0.0942729!10442-106F1;0.200859!10442-106F1;0.205421!10201-103F3;0.238426!10639-108I9;0.747961!11843-124H7;0.429987!11841-124H5;0.73138!10693-109F9;0.787137!10436-106E4;0.544769!10483-107A6;0.96868!10282-104F3;0.280582!10023-101D5;0.500843!10066-101I3;0.590035!10065-101I2;0.498279!10800-110I8;0.914328!10610-108F7;0.556426!10841-111E4;0.905714!10541-107H1;0.660571!10842-111E5;0.641488!10562-108A4;0.933028!10024-101D6;0.870292!10064-101I1;0.733838!10609-108F6;0.441778!10048-101G3;0.193879!10781-110G7;0.838359!10181-103D1;0.298943!10159-103A6;0.333408!10056-101H2;0.284917!10737-110B8;0.496135!10025-101D7;0.973104!10044-101F8;0.473093!10424-106D1;0.51121!10463-106H4;0.461495!10616-108G4;0.81821!10486-107A9;0.777531!10062-101H8;0.938848!10202-103F4;0.622073!10158-103A5;0.30688!10441-106E9;0.242535!10031-101E4;0.25648!10063-101H9;0.571655!10063-101H9;0.438297!11763-123H8;0.854195!11765-123I1;0.696427!11768-123I4;0.343441!10807-111A6;0.510864!10790-110H7;0.643933!10798-110I6;0.56189!10786-110H3;0.927718!10591-108D6;0.565323!10593-108D8;0.857102!10590-108D5;0.932115!10026-101D8;0.925253!10096-102C6;0.914632!10168-103B6;0.897686!10154-103A1;0.37834!10209-103G2;0.234003!10061-101H7;0.578771!10027-101D9;0.971882!10043-101F7;0.214096!10783-110G9;0.187348!10028-101E1;0.331291!10060-101H6;0.392287!10203-103F5;0.635246!10059-101H5;0.385272!10047-101G2;0.444117!10029-101E2;0.751682!10058-101H4;0.771169!10418-106C4;0.99312!10492-107B6;0.951591!10694-109G1;0.649148!10797-110I5;0.0126281!10057-101H3;0.597111!10100-102D1;0.771315!10055-101H1;0.880861!10204-103F6;0.532792!10191-103E2;0.279329!10563-108A5;0.894475
|name=motif_CATGNT
|name=motif_CATGNT
|tomtom_result=TLX1::NFIC#MA0119.1;4;0.0132461;6.30514;1;6;CATGAT;TTGGCATGGTGCCA;-!REST#MA0138.2;8;0.015974;7.6036;1;6;CATGAT;GCGCTGTCCATGGTGCTGA;+!YAP5#MA0417.1;-1;0.0167506;7.97327;1;5;CATGAT;ATGCTT;-!REST#MA0138.2;9;0.0174636;8.31267;1;6;CATGAT;GGCGCTGTCCATGGTGCTGAA;-
}}
}}

Latest revision as of 13:42, 7 September 2012

Full Name: motif_CATGNT

Motif matrix
POACGT
010259200
022592000
030002592
040025920
05648648648648
060002592

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
TLX1::NFIC#MA0119.140.01324616.3051416CATGATTTGGCATGGTGCCA-
REST#MA0138.280.0159747.603616CATGATGCGCTGTCCATGGTGCTGA+
YAP5#MA0417.1-10.01675067.9732715CATGATATGCTT-
REST#MA0138.290.01746368.3126716CATGATGGCGCTGTCCATGGTGCTGAA-
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