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MacroAPE 1083:CAYAAST,motif606: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1.925;1919.225;1.925;1.925!2;850.85;554.4;263.725;256.025!3;1.925;918.225;1.925;1002.925!4;1139.6;1.925;479.325;304.15!5;1867.25;53.9;1.925;...")
 
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38374!10789-110H6;0.706388!10828-111C9;0.828009!10788-110H5;0.925518!10792-110H9;0.329436!10765-110E9;0.709774!10829-111D1;0.38084!10830-111D2;0.831004!10831-111D3;0.720364!10832-111D4;0.351042!10833-111D5;0.630751!10764-110E8;0.419233!10770-110F5;0.0396665!10399-106A3;0.736049!10400-106A4;0.213514!10405-106A9;0.674238!10834-111D6;0.372982!10835-111D7;0.617499!10836-111D8;0.569886!10837-111D9;0.331131!10699-109G6;0.790056!10802-111A1;0.903456!10796-110I4;0.810084!10010-101C1;0.665572!10810-111A9;0.700046!10421-106C7;0.90102!10708-109H6;0.830053!12235-129G3;0.601494!12236-129G4;0.318922!12237-129G5;0.816345!10167-103B5;0.938584!10151-102I7;0.482156!10428-106D5;0.516352!10795-110I3;0.887958!10805-111A4;0.384249!10052-101G7;0.00361187!10189-103D9;0.87824!10589-108D4;0.719495!10425-106D2;0.91295!10427-106D4;0.258533!10702-109G9;0.979803!10432-106D9;0.0237536!10496-107C1;0.964176!10718-109I7;0.576674!10011-101C2;0.808752!10053-101G8;0.717871!10686-109F2;0.851873!10084-102B3;0.227558!10012-101C3;0.409978!10085-102B4;0.288205!10482-107A5;0.635039!10419-106C5;0.00164549!10080-102A8;0.0540726!10760-110E4;0.495684!10709-109H7;0.192235!10710-109H8;0.0300575!10703-109H1;0.464117!10719-109I8;0.334547!10642-109A3;0.747176!10177-103C6;0.376176!10164-103B2;0.726358!10173-103C2;0.596816!10166-103B4;0.555107!10083-102B2;0.54612!10188-103D8;0.426765!10552-107I3;0.241594!10553-107I4;0.339363!10013-101C4;0.0634641!10536-107G5;0.538791!10618-108G6;0.74764!10423-106C9;0.049397!10785-110H2;0.68359!12238-129G6;0.0401216!12239-129G7;0.0108336!12240-129G8;0.848541!10416-106C2;0.0661872!10801-110I9;0.859697!10766-110F1;0.995841!10824-111C5;0.0530449!10825-111C6;0.320327!10826-111C7;0.263836!10454-106G4;0.404678!10409-106B4;0.385902!10638-108I8;0.152603!10636-108I6;0.430418!10513-107D9;0.919129!10420-106C6;0.0230727!10082-102B1;0.418711!10014-101C5;0.209141!10070-101I7;0.352787!10452-106G2;0.564564!10453-106G3;0.600817!10449-106F8;0.711836!10042-101F6;0.697506!10069-101I6;0.403784!10193-103E4;0.204711!10631-108I1;0.385341!10438-106E6;0.1528!10488-107B2;0.0255825!10196-103E7;0.542831!10071-101I8;0.932913!10071-101I8;0.188097!10041-101F5;0.505191!10451-106G1;0.522983!10450-106F9;0.494213!10604-108F1;0.628708!10605-108F2;0.303437!10606-108F3;0.524181!10603-108E9;0.180199!10497-107C2;0.418584!10448-106F7;0.847416!10643-109A4;0.939006!10426-106D3;0.384827!10431-106D8;0.169667!10197-103E8;0.228788!10443-106F2;0.79698!10815-111B5;0.692364!10816-111B6;0.156616!10817-111B7;0.205553!10015-101C6;0.265192!10410-106B5;0.324895!10054-101G9;0.306722!10758-110E2;0.804279!10711-109H9;0.796566!10040-101F4;0.753192!10470-106I2;0.284397!10415-106C1;0.0774064!10198-103E9;0.421088!10614-108G2;0.581147!10612-108F9;0.145281!10549-107H9;0.0021703!10615-108G3;0.632576!10487-107B1;0.85464!10433-106E1;0.671988!10688-109F4;0.115013!10444-106F3;0.80034!10444-106F3;0.862391!10485-107A8;0.85047!10413-106B8;0.480052!10175-103C4;0.917522!10161-103A8;0.714308!12131-128D7;0.394164!10624-108H3;0.263236!10712-109I1;0.570461!10205-103F7;0.935015!10206-103F8;0.717781!10207-103F9;0.579324!10050-101G5;0.56467!10051-101G6;0.301627!10016-101C7;0.485841!10046-101G1;0.373124!10778-110G4;0.57867!10633-108I3;0.121788!10818-111B8;0.111966!10819-111B9;0.486642!10820-111C1;0.512231!10484-107A7;0.466828!10808-111A7;0.902217!10169-103B7;0.327911!10153-102I9;0.573833!13425-144D5;0.523344!13433-144E4;0.306893!13437-144E8;0.41181!11904-125F5;0.547269!11905-125F6;0.168357!10039-101F3;0.0552682!10791-110H8;0.32522!10017-101C8;0.0214786!10045-101F9;0.883574!10509-107D5;0.396409!10839-111E2;0.968401!10692-109F8;0.473441!10079-102A7;0.557167!10078-102A6;0.556164!10721-110A1;0.348354!10569-108B2;0.0387816!10570-108B3;0.525051!10571-108B4;0.314809!10647-109A8;0.369027!10752-110D5;0.780417!10782-110G8;0.0850501!10726-110A6;0.203618!10018-101C9;0.917039!10086-102B5;0.768164!10182-103D2;0.272028!10165-103B3;0.543029!10499-107C4;0.399277!10408-106B3;0.559643!10019-101D1;0.15378!10068-101I5;0.481593!10075-102A3;0.617044!10077-102A5;0.346429!10727-110A7;0.670509!10775-110G1;0.190001!10412-106B7;0.140399!12231-129F8;0.344795!12232-129F9;0.658847!12233-129G1;0.679813!12234-129G2;0.692336!10414-106B9;0.633577!10170-103B8;0.43427!10183-103D3;0.307602!10150-102I6;0.278681!10174-103C3;0.375595!10155-103A2;0.616918!10038-101F2;0.606761!10838-111E1;0.520141!10759-110E3;0.452602!10514-107E1;0.288709!10465-106H6;0.231529!10691-109F7;0.240008!10843-111E6;0.362859!10844-111E7;0.185758!11747-123G1;0.954426!11748-123G2;0.628721!11749-123G3;0.656976!11750-123G4;0.738385!11751-123G5;0.474054!11840-124H4;0.235589!11752-123G6;0.457599!11753-123G7;0.0951827!11754-123G8;0.540985!11755-123G9;0.192782!11756-123H1;0.375164!11833-124G6;0.409643!11760-123H5;0.95861!11836-124G9;0.820153!11758-123H3;0.621048!11835-124G8;0.433357!11762-123H7;0.628436!11838-124H2;0.777422!11757-123H2;0.476539!11759-123H4;0.689291!11761-123H6;0.661195!11842-124H6;0.553537!11837-124H1;0.884445!10568-108B1;0.946887!13230-141I8;0.0999141!13231-141I9;0.287892!10696-109G3;0.14727!10493-107B7;0.241366!10494-107B8;0.83771!10850-111F4;0.539213!10851-111F5;0.656195!10852-111F6;0.409693!10853-111F7;0.724655!10854-111F8;0.75408!10855-111F9;0.750841!10856-111G1;0.859977!10847-111F1;0.845637!10846-111E9;0.829081!10848-111F2;0.307455!10845-111E8;0.926773!10857-111G2;0.465579!10858-111G3;0.245763!10156-103A3;0.489308!11901-125F2;0.400913!11902-125F3;0.368617!11903-125F4;0.355447!10689-109F5;0.405462!10648-109A9;0.14674!10784-110H1;0.372847!10744-110C6;0.123661!10772-110F7;0.624524!10474-106I6;0.0850162!10600-108E6;0.128739!10684-109E9;0.928427!12226-129F3;0.555922!12227-129F4;0.222959!10508-107D4;0.0158517!10539-107G8;0.704097!10607-108F4;0.445662!10555-107I6;0.174887!10774-110F9;0.38254!10637-108I7;0.524564!10663-109C6;0.468919!10728-110A8;0.259988!10729-110A9;0.444675!10430-106D7;0.157215!10730-110B1;0.608879!10813-111B3;0.238832!10812-111B2;0.688021!10037-101F1;0.259877!10172-103C1;0.422468!10163-103B1;0.255015!10076-102A4;0.373241!10073-102A1;0.221238!10036-101E9;0.434384!10195-103E6;0.411748!10277-104E7;0.197869!10434-106E2;0.642224!10550-107I1;0.051125!10545-107H5;0.107824!10544-107H4;0.11798!10704-109H2;0.131453!10510-107D6;0.251433!10558-107I9;0.000590604!10020-101D2;0.964715!10732-110B3;0.459178!10049-101G4;0.383728!10698-109G5;0.24794!10437-106E5;0.0406145!10417-106C3;0.946348!10035-101E8;0.0556229!10171-103B9;0.403172!10157-103A4;0.368852!10034-101E7;0.388613!10072-101I9;0.372617!10199-103F1;0.55443!10200-103F2;0.240208!10697-109G4;0.200686!10723-110A3;0.309676!10179-103C8;0.0434857!10160-103A7;0.260602!10180-103C9;0.106112!10162-103A9;0.324879!10021-101D3;0.343866!10840-111E3;0.401966!10706-109H4;0.309809!10033-101E6;0.290287!10032-101E5;0.606623!10490-107B4;0.309781!10439-106E7;0.589554!10022-101D4;0.0176218!10176-103C5;0.952549!10469-106I1;0.586352!10067-101I4;0.0330052!10411-106B6;0.690933!10471-106I3;0.471684!10030-101E3;0.66337!10475-106I7;0.683187!10787-110H4;0.402799!10477-106I9;0.416517!10695-109G2;0.825884!11771-123I7;0.534806!11772-123I8;0.396192!11773-123I9;0.309858!10093-102C3;0.103323!10442-106F1;0.020814!10442-106F1;0.732836!10201-103F3;0.654469!10639-108I9;0.970462!11843-124H7;0.375813!11841-124H5;0.53384!10693-109F9;0.862346!10436-106E4;0.131301!10483-107A6;0.299336!10282-104F3;0.157242!10023-101D5;0.275536!10066-101I3;0.349689!10065-101I2;0.0996119!10800-110I8;0.144719!10610-108F7;0.797312!10841-111E4;0.226359!10541-107H1;0.665046!10842-111E5;0.285341!10562-108A4;0.265588!10024-101D6;0.696345!10064-101I1;0.134177!10609-108F6;0.318016!10048-101G3;0.456353!10781-110G7;0.225389!10181-103D1;0.46533!10159-103A6;0.42633!10056-101H2;0.388906!10737-110B8;0.869334!10025-101D7;0.012086!10044-101F8;0.717047!10424-106D1;0.706258!10463-106H4;0.889309!10616-108G4;0.0135575!10486-107A9;0.00573807!10062-101H8;0.385427!10202-103F4;0.27757!10158-103A5;0.0130628!10441-106E9;0.425609!10031-101E4;0.389302!10063-101H9;0.367297!10063-101H9;0.514211!11763-123H8;0.810741!11765-123I1;0.302387!11768-123I4;0.041971!10807-111A6;0.160029!10790-110H7;0.786648!10798-110I6;0.287791!10786-110H3;0.966434!10591-108D6;0.497531!10593-108D8;0.202743!10590-108D5;0.60482!10026-101D8;0.397674!10096-102C6;0.291469!10168-103B6;0.290891!10154-103A1;0.58862!10209-103G2;0.393641!10061-101H7;0.152066!10027-101D9;0.20417!10043-101F7;0.405556!10783-110G9;0.415811!10028-101E1;0.535565!10060-101H6;0.666357!10203-103F5;0.22736!10059-101H5;0.0298147!10047-101G2;0.0492628!10029-101E2;0.0876431!10058-101H4;0.259283!10418-106C4;0.143188!10492-107B6;0.027378!10694-109G1;0.271049!10797-110I5;0.771522!10057-101H3;0.150085!10100-102D1;0.342798!10055-101H1;0.39787!10204-103F6;0.996037!10191-103E2;0.638057!10563-108A5;0.37978
|name=CAYAAST,motif606,CNhs13474,T:1925.0(38.98%),B:24678.6(31.21%),P:1e-30
|name=CAYAAST,motif606,CNhs13474,T:1925.0(38.98%),B:24678.6(31.21%),P:1e-30
|tomtom_result=tin#MA0247.1;0;0.00798465;3.80069;1;7;CATAACT;CTCAAGTG;+!Pax6#MA0069.1;6;0.0169376;8.06229;1;7;CATAACT;TTCACGCATGAGTT;+!HOXA5#MA0158.1;0;0.0187158;8.90873;1;7;CATAACT;CACTAATT;+!En1#MA0027.1;3;0.0207749;9.88886;1;7;CATAACT;GAACACTACTT;-
}}
}}

Latest revision as of 14:58, 7 September 2012

Full Name: CAYAAST,motif606,CNhs13474,T:1925.0(38.98%),B:24678.6(31.21%),P:1e-30

Motif matrix
POACGT
11.9251919.2251.9251.925
2850.85554.4263.725256.025
31.925918.2251.9251002.925
41139.61.925479.325304.15
51867.2553.91.9251.925
61.9251006.775914.3751.925
71.9251.9251.9251919.225

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
tin#MA0247.100.007984653.8006917CATAACTCTCAAGTG+
Pax6#MA0069.160.01693768.0622917CATAACTTTCACGCATGAGTT+
HOXA5#MA0158.100.01871588.9087317CATAACTCACTAATT+
En1#MA0027.130.02077499.8888617CATAACTGAACACTACTT-
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