FFCP PHASE1:Mm9::chr11:78312589..78312625,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr11:78312589..78312625,+ | |id=chr11:78312589..78312625,+ | ||
|ontology_enrichment_celltype=CL:0000181!4.53e-11!5;CL:0000417!4.53e-11!5;CL:0000668!4.53e-11!5;CL:0000412!4.53e-11!5;CL:0000182!4.53e-11!5 | |ontology_enrichment_celltype=CL:0000181!4.53e-11!5;CL:0000417!4.53e-11!5;CL:0000668!4.53e-11!5;CL:0000412!4.53e-11!5;CL:0000182!4.53e-11!5 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.72e-30!22;UBERON:0007499!1.72e-30!22;UBERON:0006925!1.72e-30!22;UBERON:0009497!1.72e-30!22;UBERON:0000015!1.72e-30!22;UBERON:0002423!1.72e-30!22;UBERON:0006235!1.72e-30!22;UBERON:0008835!1.72e-30!22;UBERON:0003894!1.72e-30!22;UBERON:0004161!1.72e-30!22;UBERON:0008836!1.72e-30!22;UBERON:0009854!4.93e-29!23;UBERON:0009856!4.93e-29!23;UBERON:0002365!1.81e-26!25;UBERON:0002330!1.81e-26!25;UBERON:0003914!1.18e-12!47;UBERON:0005256!1.18e-12!47;UBERON:0005172!5.18e-12!49;UBERON:0005173!5.18e-12!49;UBERON:0002417!5.18e-12!49;UBERON:0000916!5.18e-12!49;UBERON:0005057!2.01e-11!51;UBERON:0000949!3.09e-11!72;UBERON:0003929!2.26e-10!55;UBERON:0000466!6.49e-10!79;UBERON:0002368!2.95e-09!60;UBERON:0005177!5.91e-09!85;UBERON:0000970!6.73e-09!9;UBERON:0000019!6.73e-09!9;UBERON:0000047!6.73e-09!9;UBERON:0004088!6.73e-09!9;UBERON:0002104!6.73e-09!9;UBERON:0001456!6.73e-09!9;UBERON:0003072!6.73e-09!9;UBERON:0003071!6.73e-09!9;UBERON:0004128!6.73e-09!9;UBERON:0002530!2.59e-08!65;UBERON:0000490!3.84e-08!66;UBERON:0009569!3.84e-08!66;UBERON:0001041!5.38e-08!92;UBERON:0005911!1.17e-07!69;UBERON:0002405!1.66e-07!70;UBERON:0001048!1.87e-07!147;UBERON:0000077!2.14e-07!97;UBERON:0002100!2.78e-07!98;UBERON:0001444!3.16e-07!11 | |ontology_enrichment_uberon=UBERON:0002107!1.72e-30!22;UBERON:0007499!1.72e-30!22;UBERON:0006925!1.72e-30!22;UBERON:0009497!1.72e-30!22;UBERON:0000015!1.72e-30!22;UBERON:0002423!1.72e-30!22;UBERON:0006235!1.72e-30!22;UBERON:0008835!1.72e-30!22;UBERON:0003894!1.72e-30!22;UBERON:0004161!1.72e-30!22;UBERON:0008836!1.72e-30!22;UBERON:0009854!4.93e-29!23;UBERON:0009856!4.93e-29!23;UBERON:0002365!1.81e-26!25;UBERON:0002330!1.81e-26!25;UBERON:0003914!1.18e-12!47;UBERON:0005256!1.18e-12!47;UBERON:0005172!5.18e-12!49;UBERON:0005173!5.18e-12!49;UBERON:0002417!5.18e-12!49;UBERON:0000916!5.18e-12!49;UBERON:0005057!2.01e-11!51;UBERON:0000949!3.09e-11!72;UBERON:0003929!2.26e-10!55;UBERON:0000466!6.49e-10!79;UBERON:0002368!2.95e-09!60;UBERON:0005177!5.91e-09!85;UBERON:0000970!6.73e-09!9;UBERON:0000019!6.73e-09!9;UBERON:0000047!6.73e-09!9;UBERON:0004088!6.73e-09!9;UBERON:0002104!6.73e-09!9;UBERON:0001456!6.73e-09!9;UBERON:0003072!6.73e-09!9;UBERON:0003071!6.73e-09!9;UBERON:0004128!6.73e-09!9;UBERON:0002530!2.59e-08!65;UBERON:0000490!3.84e-08!66;UBERON:0009569!3.84e-08!66;UBERON:0001041!5.38e-08!92;UBERON:0005911!1.17e-07!69;UBERON:0002405!1.66e-07!70;UBERON:0001048!1.87e-07!147;UBERON:0000077!2.14e-07!97;UBERON:0002100!2.78e-07!98;UBERON:0001444!3.16e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.40e-07,9;UBERON:0000019,1.40e-07,9;UBERON:0000047,1.40e-07,9;UBERON:0010312,1.40e-07,9;UBERON:0004088,1.40e-07,9;UBERON:0002104,1.40e-07,9;UBERON:0001456,1.40e-07,9;UBERON:0003072,1.40e-07,9;UBERON:0004128,1.40e-07,9;UBERON:0003071,1.40e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,1.07940638327563,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.824115303819,0,0,0,0,0.136072998302656,0.2562274405697,0.468508622798644,82.267671895007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0.166845105716094,0,0,0,0.482354319504834,0.25462585178142,0,0.486405680325106,0.274561413188081,1.43768206527355,0,0.624075346229121,0.505157755894224,0.358794827043824,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0.485561272309963,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,1.07940638327563,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.824115303819,0,0,0,0,0.136072998302656,0.2562274405697,0.468508622798644,82.267671895007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0.166845105716094,0,0,0,0.482354319504834,0.25462585178142,0,0.486405680325106,0.274561413188081,1.43768206527355,0,0.624075346229121,0.505157755894224,0.358794827043824,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0.485561272309963,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Vtn | |short_description=p2@Vtn | ||
}} | }} |
Revision as of 15:29, 14 November 2012
Short description: | p2@Vtn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vtn_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 0bp_to_ENSMUST00000017488, ENSMUST00000128479, NM_011707, uc007kjk.2_5end |
EntrezGene: | Vtn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.40e-07 | 9 |
camera-type eye | 1.40e-07 | 9 |
simple eye | 1.40e-07 | 9 |
immature eye | 1.40e-07 | 9 |
ocular region | 1.40e-07 | 9 |
visual system | 1.40e-07 | 9 |
face | 1.40e-07 | 9 |
optic cup | 1.40e-07 | 9 |
optic vesicle | 1.40e-07 | 9 |
eye primordium | 1.40e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.