FFCP PHASE1:Mm9::chr13:60830741..60830746,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=62|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:60830741..60830746,+|id=chr13:60830741..60830746,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.23e-09,22;UBERON:0007499,1.23e-09,22;UBERON:0006925,1.23e-09,22;UBERON:0009497,1.23e-09,22;UBERON:0000015,1.23e-09,22;UBERON:0002423,1.23e-09,22;UBERON:0006235,1.23e-09,22;UBERON:0008835,1.23e-09,22;UBERON:0003894,1.23e-09,22;UBERON:0004161,1.23e-09,22;UBERON:0008836,1.23e-09,22;UBERON:0009854,3.08e-09,23;UBERON:0009856,3.08e-09,23;UBERON:0002365,1.56e-08,25;UBERON:0002330,1.56e-08,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.183546752161682,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3498495759221,0,0,0,0.768436610643109,0.207379224616955,0.405017814995072,0,0.285650984403804,0,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.127687338085188,0,0,0,0,0,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0,0.0755715601067855,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0,0,0,0,0,0.23517741427141,0,0.741584903203122,0,0,0,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,0,0,0.628271760564322,0,0.511430914660661,0.20778804455956,0,0.305518091550949,0,0,0.210441855886474,0.520481771850815,0.229902104433473,0.360124259610698,0,0,0.2562274405697,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0.703804496655795,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0,0,0.407302655690628,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.246794327843601,0.592905254174298,0,0,0,0.202860121388503,0.482354319504834,0,0.287696137450811,4.86405680325106,0,1.43768206527355,1.11642284300551,0.936113019343682,0.252578877947112,0.538192240565737,2.41221760681684,0.369506380333209,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0,0.390267295715598,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0.642642632843614,0.283880170416537,0.178065603667255,0,0.329940245945071,1.32745138339963,0,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0.63549621259146,0.441056796109924,0,0,0,0,0,0.582961673259701,0,0.170870880797853,0.412773735926445,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0.469428954583016,0.39061315453185,0.104859344425711,0,0,0.948033361884535,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.302899349844443,0,0.302478555410522,0,0,0.467507608726276,0.226730383615211,0.221985953374065,0,0.167884616364078,0.19318959403219,0.375364950902364,0.73260649706906,0.643105137237198,0,1.12950368523413,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.859484216193193,0.382576664137687,0,0|short_description=p@chr13:60830741..60830746,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=62 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:60830741..60830746,+ | |||
|id=chr13:60830741..60830746,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.23e-09,22;UBERON:0007499,1.23e-09,22;UBERON:0006925,1.23e-09,22;UBERON:0009497,1.23e-09,22;UBERON:0000015,1.23e-09,22;UBERON:0002423,1.23e-09,22;UBERON:0006235,1.23e-09,22;UBERON:0008835,1.23e-09,22;UBERON:0003894,1.23e-09,22;UBERON:0004161,1.23e-09,22;UBERON:0008836,1.23e-09,22;UBERON:0009854,3.08e-09,23;UBERON:0009856,3.08e-09,23;UBERON:0002365,1.56e-08,25;UBERON:0002330,1.56e-08,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.183546752161682,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3498495759221,0,0,0,0.768436610643109,0.207379224616955,0.405017814995072,0,0.285650984403804,0,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.127687338085188,0,0,0,0,0,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0,0.0755715601067855,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0,0,0,0,0,0.23517741427141,0,0.741584903203122,0,0,0,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,0,0,0.628271760564322,0,0.511430914660661,0.20778804455956,0,0.305518091550949,0,0,0.210441855886474,0.520481771850815,0.229902104433473,0.360124259610698,0,0,0.2562274405697,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0.703804496655795,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0,0,0.407302655690628,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.246794327843601,0.592905254174298,0,0,0,0.202860121388503,0.482354319504834,0,0.287696137450811,4.86405680325106,0,1.43768206527355,1.11642284300551,0.936113019343682,0.252578877947112,0.538192240565737,2.41221760681684,0.369506380333209,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0,0.390267295715598,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0.642642632843614,0.283880170416537,0.178065603667255,0,0.329940245945071,1.32745138339963,0,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0.63549621259146,0.441056796109924,0,0,0,0,0,0.582961673259701,0,0.170870880797853,0.412773735926445,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0.469428954583016,0.39061315453185,0.104859344425711,0,0,0.948033361884535,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.302899349844443,0,0.302478555410522,0,0,0.467507608726276,0.226730383615211,0.221985953374065,0,0.167884616364078,0.19318959403219,0.375364950902364,0.73260649706906,0.643105137237198,0,1.12950368523413,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.859484216193193,0.382576664137687,0,0 | |||
|short_description=p@chr13:60830741..60830746,+ | |||
}} |
Revision as of 00:57, 13 September 2013
Short description: | p@chr13:60830741..60830746, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:60830741..60830746, + |
Coexpression cluster: | MCL_coexpression_mm9:62 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.23e-09 | 22 |
epithelial sac | 1.23e-09 | 22 |
digestive gland | 1.23e-09 | 22 |
epithelium of foregut-midgut junction | 1.23e-09 | 22 |
anatomical boundary | 1.23e-09 | 22 |
hepatobiliary system | 1.23e-09 | 22 |
foregut-midgut junction | 1.23e-09 | 22 |
hepatic diverticulum | 1.23e-09 | 22 |
liver primordium | 1.23e-09 | 22 |
septum transversum | 1.23e-09 | 22 |
liver bud | 1.23e-09 | 22 |
digestive tract diverticulum | 3.08e-09 | 23 |
sac | 3.08e-09 | 23 |
exocrine gland | 1.56e-08 | 25 |
exocrine system | 1.56e-08 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.