FFCP PHASE1:Mm9::chr11:114995295..114995310,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=246746|HGNC=|MCL_coexpression_id=3|UniProt=Q6SJQ7,A2A6Z2|association_with_transcript=0bp_to_ENSMUST00000051264,ENSMUST00000092455,ENSMUST00000106561,ENSMUST00000106562,ENSMUST00000146254,NM_001169153,NM_145634,uc007mgn.2,uc011yhh.1,uc011yhi.1_5end|description=CAGE_peak_1_at_Cd300lf_5end|id=chr11:114995295..114995310,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!6.38e-08!70;UBERON:0002204!8.80e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.14e-10,32;UBERON:0001474,6.45e-09,22;UBERON:0004765,6.45e-09,22;UBERON:0001434,6.45e-09,22;UBERON:0009569,5.49e-08,66;UBERON:0002106,2.28e-07,6;UBERON:0004457,2.28e-07,6;UBERON:0000042,2.28e-07,6;UBERON:0004854,2.28e-07,6;UBERON:0009034,2.28e-07,6;UBERON:0002095,2.28e-07,6;UBERON:0004782,2.28e-07,6;UBERON:0003281,2.28e-07,6;UBERON:0009664,2.28e-07,6;UBERON:0002296,2.28e-07,6;UBERON:0005602,2.28e-07,6;UBERON:0001179,2.28e-07,6;UBERON:0006293,2.28e-07,6;UBERON:0002100,2.47e-07,90;UBERON:0002371,8.36e-07,16|phase1_expression=0,0,0,0,0,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,3.33109761815663,3.64455481301687,2.79824751251259,3.62781490161973,3.56497527374921,3.81950686618227,1.7008658030214,1.98581902401771,1.56719873483361,2.07990149631429,2.2940928106717,0,0,0.646413698057667,0.190023419456374,0,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,410.998061383643,257.840663692854,332.437577423362,435.879532630982,343.571878934098,363.647254420334,0,0,0,0,0.218025156380447,0,0,0.419959264876088,0,2.01339127269284,0,0,0.771778308107841,0.286533439938757,2.57836046138721,0,0,0,0,0,14.8483453351431,5.93319817540185,9.9467216092454,0.898800331555214,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0.186399445825301,1.13589289999776,0.529000920747499,0.579728977403356,0.860423876981386,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.59857431606684,8.2860122767095,1.03909497345377,0.173485326766136,0,1.61430848079241,0.753613202763113,1.41106448562846,0.251333182659351,0.494389935468748,0.433798070759735,13.2691582792481,2.91180329905337,8.39197770149496,7.75800405016355,0,0,0,2.29911349687732,0.239630249011841,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0.407357455401265,9.08170885453679,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0,0,0,0,0,0.411564272815887,0,0.702213187313235,0,0,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.700592054203017,0.493679549740441,0.32833492815819,0.0810688095458557,0,0,0.134206418760372,0,0,1.65209391491899,1.05780226665418,0,0.232236671860439,0.128867461322093,0.605050573870028,0,0.190225626112559,0.949058123089023,0.164698954724011,0.754005626400808,0.397912944082302,1.36474860983384,1.79763881730844,2.80979464837102,2.19055400579804,0,0,1.1270773567308,0,0,0.631222379012867,0.0632365371242573,0.147610147979602,0,0,0.592905254174298,0.166845105716094,0.393117990226406,1.12431056192427,0.608580364165509,4.10001171579109,3.05551022137704,6.90470729881945,14.4300351829781,4.66754402419738,10.0637744569148,7.07067800570156,1.87222603868736,0.757736633841335,0.358794827043824,1.4473305640901,10.7156850296631,0,0,0.509235257325564,0,1.17254380209271,2.61848004974615,10.3420833364633,4.41378403497335,3.76489972402917,3.50800491046472,5.57135270033509,7.25276923836761,8.67894351489069,3.01582567878545,5.4390568381871,0,0.275936746304732,0,0.117211686592203,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.712262414669021,0.651547837414304,1.97964147567043,0,0,0,0.188605079755898,0.295301892880773,0.614870295887855,1.55056975900933,0.727067458955011,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.913394847343798,0.469343416127421,0.21183207086382,0,0.16488625294148,0.807322133479528,0.241251699712623,0.119372344003136,0.164140899745061,3.20628920292836,0.18542530201051,11.7900907750518,6.3979929068599,27.7791791054568,4.89757988212197,2.87057878214153,4.34678529092393,0.339956859987711,0.69975726161829,1.10559979043539,0,0,0.203319467126849,0.540026704109006,0.627264888043406,0.655087691238533,0.539457385539283,0.743881101528023,0.26175594198403,0,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0.844780627453891,1.64300134104056,0.39061315453185,0,0,0,0.316011120628178,0.202725215290164,0.205421914329655,1.42912905275575,0,0.39736270956253,0.600977247599844,0.295379054349154,0.504832249740738,0.838274873204998,0.806609481094724,1.26695244961678,0.673482891482306,0.467507608726276,0.226730383615211,0,0,0,0.386379188064381,0.750729901804728,1.09890974560359,9.00347192132076,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.367687016900028,0.222246727801615,0.824140228955577,0.64183841918363,0.758091635291392,0.760437899670719,0.377252682772152,0.749132059759059,0.9603772860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| ||
|EntrezGene=246746 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q6SJQ7,A2A6Z2 | |||
|association_with_transcript=0bp_to_ENSMUST00000051264,ENSMUST00000092455,ENSMUST00000106561,ENSMUST00000106562,ENSMUST00000146254,NM_001169153,NM_145634,uc007mgn.2,uc011yhh.1,uc011yhi.1_5end | |||
|description=CAGE_peak_1_at_Cd300lf_5end | |||
|id=chr11:114995295..114995310,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!6.38e-08!70;UBERON:0002204!8.80e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.14e-10,32;UBERON:0001474,6.45e-09,22;UBERON:0004765,6.45e-09,22;UBERON:0001434,6.45e-09,22;UBERON:0009569,5.49e-08,66;UBERON:0002106,2.28e-07,6;UBERON:0004457,2.28e-07,6;UBERON:0000042,2.28e-07,6;UBERON:0004854,2.28e-07,6;UBERON:0009034,2.28e-07,6;UBERON:0002095,2.28e-07,6;UBERON:0004782,2.28e-07,6;UBERON:0003281,2.28e-07,6;UBERON:0009664,2.28e-07,6;UBERON:0002296,2.28e-07,6;UBERON:0005602,2.28e-07,6;UBERON:0001179,2.28e-07,6;UBERON:0006293,2.28e-07,6;UBERON:0002100,2.47e-07,90;UBERON:0002371,8.36e-07,16 | |||
|phase1_expression=0,0,0,0,0,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,3.33109761815663,3.64455481301687,2.79824751251259,3.62781490161973,3.56497527374921,3.81950686618227,1.7008658030214,1.98581902401771,1.56719873483361,2.07990149631429,2.2940928106717,0,0,0.646413698057667,0.190023419456374,0,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,410.998061383643,257.840663692854,332.437577423362,435.879532630982,343.571878934098,363.647254420334,0,0,0,0,0.218025156380447,0,0,0.419959264876088,0,2.01339127269284,0,0,0.771778308107841,0.286533439938757,2.57836046138721,0,0,0,0,0,14.8483453351431,5.93319817540185,9.9467216092454,0.898800331555214,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0.186399445825301,1.13589289999776,0.529000920747499,0.579728977403356,0.860423876981386,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.59857431606684,8.2860122767095,1.03909497345377,0.173485326766136,0,1.61430848079241,0.753613202763113,1.41106448562846,0.251333182659351,0.494389935468748,0.433798070759735,13.2691582792481,2.91180329905337,8.39197770149496,7.75800405016355,0,0,0,2.29911349687732,0.239630249011841,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0.407357455401265,9.08170885453679,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0,0,0,0,0,0.411564272815887,0,0.702213187313235,0,0,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.700592054203017,0.493679549740441,0.32833492815819,0.0810688095458557,0,0,0.134206418760372,0,0,1.65209391491899,1.05780226665418,0,0.232236671860439,0.128867461322093,0.605050573870028,0,0.190225626112559,0.949058123089023,0.164698954724011,0.754005626400808,0.397912944082302,1.36474860983384,1.79763881730844,2.80979464837102,2.19055400579804,0,0,1.1270773567308,0,0,0.631222379012867,0.0632365371242573,0.147610147979602,0,0,0.592905254174298,0.166845105716094,0.393117990226406,1.12431056192427,0.608580364165509,4.10001171579109,3.05551022137704,6.90470729881945,14.4300351829781,4.66754402419738,10.0637744569148,7.07067800570156,1.87222603868736,0.757736633841335,0.358794827043824,1.4473305640901,10.7156850296631,0,0,0.509235257325564,0,1.17254380209271,2.61848004974615,10.3420833364633,4.41378403497335,3.76489972402917,3.50800491046472,5.57135270033509,7.25276923836761,8.67894351489069,3.01582567878545,5.4390568381871,0,0.275936746304732,0,0.117211686592203,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.712262414669021,0.651547837414304,1.97964147567043,0,0,0,0.188605079755898,0.295301892880773,0.614870295887855,1.55056975900933,0.727067458955011,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.913394847343798,0.469343416127421,0.21183207086382,0,0.16488625294148,0.807322133479528,0.241251699712623,0.119372344003136,0.164140899745061,3.20628920292836,0.18542530201051,11.7900907750518,6.3979929068599,27.7791791054568,4.89757988212197,2.87057878214153,4.34678529092393,0.339956859987711,0.69975726161829,1.10559979043539,0,0,0.203319467126849,0.540026704109006,0.627264888043406,0.655087691238533,0.539457385539283,0.743881101528023,0.26175594198403,0,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0.844780627453891,1.64300134104056,0.39061315453185,0,0,0,0.316011120628178,0.202725215290164,0.205421914329655,1.42912905275575,0,0.39736270956253,0.600977247599844,0.295379054349154,0.504832249740738,0.838274873204998,0.806609481094724,1.26695244961678,0.673482891482306,0.467507608726276,0.226730383615211,0,0,0,0.386379188064381,0.750729901804728,1.09890974560359,9.00347192132076,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.367687016900028,0.222246727801615,0.824140228955577,0.64183841918363,0.758091635291392,0.760437899670719,0.377252682772152,0.749132059759059,0.960377286073039,0.976402972245426,0.952587382566147,0.579421629724277,0.77163688185482,0.412085900803307,1.32479028120958,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.658765662907314,1.26921911837515,0.914639864363863,0.789209134313529,0.950628796921032,0,0.593175090620871,0.788035859004508,0,0.464810523557898,1.35034627686799,0,1.63752125911786,1.28922632428979,1.91288332068843,3.97064554415128,3.2461496986859 | |||
|short_description=p1@Cd300lf | |||
}} |
Revision as of 18:44, 12 September 2013
Short description: | p1@Cd300lf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cd300lf_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000051264, ENSMUST00000092455, ENSMUST00000106561, ENSMUST00000106562, ENSMUST00000146254, NM_001169153, NM_145634, uc007mgn.2, uc011yhh.1, uc011yhi.1_5end |
EntrezGene: | Cd300lf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.14e-10 | 32 |
bone element | 6.45e-09 | 22 |
skeletal element | 6.45e-09 | 22 |
skeletal system | 6.45e-09 | 22 |
subdivision of trunk | 5.49e-08 | 66 |
spleen | 2.28e-07 | 6 |
cavity lining | 2.28e-07 | 6 |
serous membrane | 2.28e-07 | 6 |
gastrointestinal system mesentery | 2.28e-07 | 6 |
stomach region | 2.28e-07 | 6 |
mesentery | 2.28e-07 | 6 |
gastrointestinal system serosa | 2.28e-07 | 6 |
mesentery of stomach | 2.28e-07 | 6 |
gut mesentery | 2.28e-07 | 6 |
dorsal mesentery | 2.28e-07 | 6 |
dorsal mesogastrium | 2.28e-07 | 6 |
peritoneal cavity | 2.28e-07 | 6 |
spleen primordium | 2.28e-07 | 6 |
trunk | 2.47e-07 | 90 |
bone marrow | 8.36e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.