FFCP PHASE1:Mm9::chr18:60807918..60807943,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=104027|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000139236,ENSMUST00000154857_5end|description=CAGE_peak_4_at_Synpo_5end|id=chr18:60807918..60807943,-|ontology_enrichment_celltype=CL:0000107!3.81e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,2.84e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!2.16e-09!33;UBERON:0004535!3.81e-09!23;UBERON:0001009!3.81e-09!23;UBERON:0007100!1.79e-07!18;UBERON:0000948!1.79e-07!18;UBERON:0005498!1.79e-07!18;UBERON:0004140!1.79e-07!18;UBERON:0009881!1.79e-07!18;UBERON:0004141!1.79e-07!18;UBERON:0003084!1.79e-07!18;UBERON:0007005!1.79e-07!18;UBERON:0004139!1.79e-07!18;UBERON:0004291!1.79e-07!18;UBERON:0000468!1.82e-07!333;UBERON:0002410!3.81e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004535,7.54e-09,23;UBERON:0001009,7.54e-09,23;UBERON:0002410,2.84e-08,9;UBERON:0004872,6.28e-08,33;UBERON:0007100,1.90e-07,18;UBERON:0000948,1.90e-07,18;UBERON:0005498,1.90e-07,18;UBERON:0004140,1.90e-07,18;UBERON:0009881,1.90e-07,18;UBERON:0004141,1.90e-07,18;UBERON:0003084,1.90e-07,18;UBERON:0007005,1.90e-07,18;UBERON:0004139,1.90e-07,18;UBERON:0004291,1.90e-07,18;UBERON:0000010,7.92e-07,11;UBERON:0002102,9.07e-07,7;UBERON:0004710,9.07e-07,7;UBERON:0005419,9.07e-07,7;UBERON:0005417,9.07e-07,7;UBERON:0005729,9.07e-07,7|phase1_expression=4.48416771893423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28766635497425,5.37297735463427,8.07605709511399,13.3006528539167,0,0,0.58328969722285,0.839918529752175,0,0,0,0,44.2486229981829,25.7880095944881,29.9089813520917,0,0,0,8.80995783379743,2.66788438833342,0,0.988866362566974,0.7104801149461,3.29560121570245,1.15265491596466,0.311068836925433,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0.263772575460388,0.182975287204819,0,0,0,0.45839474333043,0,0.142371680799103,0.372798891650601,0.37863096666592,1.13357340160178,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,1.12674735821344,0,0,0,0.216491041011214,0.506719730950197,0,0.34255163915718,1.29468941823586,0.742210695324124,0.693941307064543,0.913396434936424,1.61430848079241,0.904335843315735,1.41106448562846,0.251333182659351,1.48316980640624,2.60278842455841,0,7.27950824763341,1.76673214768315,3.87900202508178,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0.255715457330331,0,0,2.95334155165917,1.49288364732112,0.758168275301024,0,5.59517904739626,2.29902104433473,2.70093194708024,1.20563854268572,1.29269348387523,1.40925092313335,0.655912071918102,0.258703370739016,8.62271971731369,14.9393803332577,15.4836989264275,6.35667624039967,10.8438427197983,10.0993128291428,5.76189981942242,2.58744546864041,0,0,0,5.17814431338755,5.8631514995274,3.78130329068131,5.20838418287463,2.75469924446365,2.77680803197281,1.86027155800326,4.29237442239391,3.97002164048376,4.60767579757745,2.13417703302824,2.10778904819225,1.75439984910399,0.878200461164203,0.805238512562231,0,0.102904612379284,0,0,5.75878276445132,3.25131340604614,3.09281907173024,1.4117846723634,1.33426826306922,1.14135375667535,0.949058123089023,0.658795818896044,1.25667604400135,0.994782360205754,0.19496408711912,0,0.216138049874694,0.597423819763102,1.13800740571849,1.37098215131675,0,1.01825663922657,1.16371492300575,1.19230893813542,2.46622494784603,0.590440591918409,0.470996183524124,0.370191491765402,0,1.00107063429656,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.648540907100142,0,0,0.744281895337007,0,0,0.717589654087649,0,0,2.27389694124582,1.30371981153621,1.69745085775188,0.234690248288502,1.17254380209271,2.38043640886014,1.95133647857799,1.7339865851681,2.87904096543407,3.18909537314974,0.655453258862952,0.345369963731791,0.433947175744535,0,0,0.491764273019036,2.48343071674259,0,0.35163505977661,3.11476396215683,0.504941854408746,8.83423014365519,7.41833614163613,6.24727853425117,14.5770966751057,14.704712489438,17.2676683781188,9.71545684019746,9.35218745316198,6.7198922250909,0,8.09058485687131,1.95872164033981,2.76907830901079,0.329940245945071,1.32745138339963,1.69946445308487,0.906970670894253,0.754420319023592,1.47650946440386,1.22974059177571,3.10113951801865,0.727067458955011,1.06949213515416,0.632073515871632,0,0,0.340439605753788,5.40183282093931,2.19909762430683,2.14337035031592,3.19212420556092,2.85390108163313,1.48094118541909,2.43571959291679,2.81606049676452,0.21183207086382,0.220528398054962,0.65954501176592,1.29171541356724,1.99032652262914,0.716234064018819,0.328281799490123,0.582961673259701,0.18542530201051,0.683483523191411,7.84270098260245,6.66700298530962,0.753473828018764,0.410082683163076,0.228778173206523,0,0,0,0,5.53587988766987,2.43983360552218,1.40406943068342,0.418176592028937,1.09181281873089,1.34864346384821,1.1571483801547,0.523511883968059,0.129614973291793,0,0,2.69129782879162,2.15096037594227,3.11121901350476,4.1331143512874,5.06868376472335,4.3422178298929,5.07797100891405,1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| ||
|EntrezGene=104027 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000139236,ENSMUST00000154857_5end | |||
|description=CAGE_peak_4_at_Synpo_5end | |||
|id=chr18:60807918..60807943,- | |||
|ontology_enrichment_celltype=CL:0000107!3.81e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.84e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.16e-09!33;UBERON:0004535!3.81e-09!23;UBERON:0001009!3.81e-09!23;UBERON:0007100!1.79e-07!18;UBERON:0000948!1.79e-07!18;UBERON:0005498!1.79e-07!18;UBERON:0004140!1.79e-07!18;UBERON:0009881!1.79e-07!18;UBERON:0004141!1.79e-07!18;UBERON:0003084!1.79e-07!18;UBERON:0007005!1.79e-07!18;UBERON:0004139!1.79e-07!18;UBERON:0004291!1.79e-07!18;UBERON:0000468!1.82e-07!333;UBERON:0002410!3.81e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,7.54e-09,23;UBERON:0001009,7.54e-09,23;UBERON:0002410,2.84e-08,9;UBERON:0004872,6.28e-08,33;UBERON:0007100,1.90e-07,18;UBERON:0000948,1.90e-07,18;UBERON:0005498,1.90e-07,18;UBERON:0004140,1.90e-07,18;UBERON:0009881,1.90e-07,18;UBERON:0004141,1.90e-07,18;UBERON:0003084,1.90e-07,18;UBERON:0007005,1.90e-07,18;UBERON:0004139,1.90e-07,18;UBERON:0004291,1.90e-07,18;UBERON:0000010,7.92e-07,11;UBERON:0002102,9.07e-07,7;UBERON:0004710,9.07e-07,7;UBERON:0005419,9.07e-07,7;UBERON:0005417,9.07e-07,7;UBERON:0005729,9.07e-07,7 | |||
|phase1_expression=4.48416771893423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28766635497425,5.37297735463427,8.07605709511399,13.3006528539167,0,0,0.58328969722285,0.839918529752175,0,0,0,0,44.2486229981829,25.7880095944881,29.9089813520917,0,0,0,8.80995783379743,2.66788438833342,0,0.988866362566974,0.7104801149461,3.29560121570245,1.15265491596466,0.311068836925433,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0.263772575460388,0.182975287204819,0,0,0,0.45839474333043,0,0.142371680799103,0.372798891650601,0.37863096666592,1.13357340160178,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,1.12674735821344,0,0,0,0.216491041011214,0.506719730950197,0,0.34255163915718,1.29468941823586,0.742210695324124,0.693941307064543,0.913396434936424,1.61430848079241,0.904335843315735,1.41106448562846,0.251333182659351,1.48316980640624,2.60278842455841,0,7.27950824763341,1.76673214768315,3.87900202508178,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0.255715457330331,0,0,2.95334155165917,1.49288364732112,0.758168275301024,0,5.59517904739626,2.29902104433473,2.70093194708024,1.20563854268572,1.29269348387523,1.40925092313335,0.655912071918102,0.258703370739016,8.62271971731369,14.9393803332577,15.4836989264275,6.35667624039967,10.8438427197983,10.0993128291428,5.76189981942242,2.58744546864041,0,0,0,5.17814431338755,5.8631514995274,3.78130329068131,5.20838418287463,2.75469924446365,2.77680803197281,1.86027155800326,4.29237442239391,3.97002164048376,4.60767579757745,2.13417703302824,2.10778904819225,1.75439984910399,0.878200461164203,0.805238512562231,0,0.102904612379284,0,0,5.75878276445132,3.25131340604614,3.09281907173024,1.4117846723634,1.33426826306922,1.14135375667535,0.949058123089023,0.658795818896044,1.25667604400135,0.994782360205754,0.19496408711912,0,0.216138049874694,0.597423819763102,1.13800740571849,1.37098215131675,0,1.01825663922657,1.16371492300575,1.19230893813542,2.46622494784603,0.590440591918409,0.470996183524124,0.370191491765402,0,1.00107063429656,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.648540907100142,0,0,0.744281895337007,0,0,0.717589654087649,0,0,2.27389694124582,1.30371981153621,1.69745085775188,0.234690248288502,1.17254380209271,2.38043640886014,1.95133647857799,1.7339865851681,2.87904096543407,3.18909537314974,0.655453258862952,0.345369963731791,0.433947175744535,0,0,0.491764273019036,2.48343071674259,0,0.35163505977661,3.11476396215683,0.504941854408746,8.83423014365519,7.41833614163613,6.24727853425117,14.5770966751057,14.704712489438,17.2676683781188,9.71545684019746,9.35218745316198,6.7198922250909,0,8.09058485687131,1.95872164033981,2.76907830901079,0.329940245945071,1.32745138339963,1.69946445308487,0.906970670894253,0.754420319023592,1.47650946440386,1.22974059177571,3.10113951801865,0.727067458955011,1.06949213515416,0.632073515871632,0,0,0.340439605753788,5.40183282093931,2.19909762430683,2.14337035031592,3.19212420556092,2.85390108163313,1.48094118541909,2.43571959291679,2.81606049676452,0.21183207086382,0.220528398054962,0.65954501176592,1.29171541356724,1.99032652262914,0.716234064018819,0.328281799490123,0.582961673259701,0.18542530201051,0.683483523191411,7.84270098260245,6.66700298530962,0.753473828018764,0.410082683163076,0.228778173206523,0,0,0,0,5.53587988766987,2.43983360552218,1.40406943068342,0.418176592028937,1.09181281873089,1.34864346384821,1.1571483801547,0.523511883968059,0.129614973291793,0,0,2.69129782879162,2.15096037594227,3.11121901350476,4.1331143512874,5.06868376472335,4.3422178298929,5.07797100891405,1.57289016638566,0.241584120826006,0,0.316011120628178,3.64905387522296,1.64337531463724,1.42912905275575,0.537080087002444,0.39736270956253,0.480781798079875,0.590758108698309,0.706765149637033,0.304827226619999,0.403304740547362,0.38983152295901,0.384847366561318,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0,0,8.19920045914996,10.3746467084268,7.68301225893604,2.91728060481953,3.35381060204772,2.5738091183002,2.44471400581777,1.23621034343337,1.92551525755089,0.758091635291392,0.760437899670719,2.26351609663291,2.1537546718073,1.47257850531199,1.78049953762401,1.42888107384922,1.62238056322798,1.54327376370964,1.64834360321323,2.06078488188156,1.37147700954166,1.95223386775271,1.1921809497366,0.726732083161643,2.07040636913727,1.26921911837515,2.19513567447327,1.31534855718921,1.62964936615034,1.12228454331548,1.66089025373844,1.57607171800902,1.63692417267876,2.16911577660352,2.3148793317737,3.49734809113124,2.8071793013449,3.86767897286937,5.35607329792761,3.30887128679273,4.63735671240843 | |||
|short_description=p4@Synpo | |||
}} |
Revision as of 16:26, 13 September 2013
Short description: | p4@Synpo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Synpo_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000139236, ENSMUST00000154857_5end |
EntrezGene: | Synpo |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.84e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 7.54e-09 | 23 |
circulatory system | 7.54e-09 | 23 |
autonomic nervous system | 2.84e-08 | 9 |
splanchnic layer of lateral plate mesoderm | 6.28e-08 | 33 |
primary circulatory organ | 1.90e-07 | 18 |
heart | 1.90e-07 | 18 |
primitive heart tube | 1.90e-07 | 18 |
primary heart field | 1.90e-07 | 18 |
anterior lateral plate mesoderm | 1.90e-07 | 18 |
heart tube | 1.90e-07 | 18 |
heart primordium | 1.90e-07 | 18 |
cardiac mesoderm | 1.90e-07 | 18 |
cardiogenic plate | 1.90e-07 | 18 |
heart rudiment | 1.90e-07 | 18 |
peripheral nervous system | 7.92e-07 | 11 |
forelimb | 9.07e-07 | 7 |
pectoral appendage | 9.07e-07 | 7 |
pectoral appendage bud | 9.07e-07 | 7 |
forelimb bud | 9.07e-07 | 7 |
forelimb/pectoral fin field | 9.07e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.