FFCP PHASE1:Mm9::chr14:122874406..122874413,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22772|HGNC=|MCL_coexpression_id=30|UniProt=D3YXF6|association_with_transcript=-190bp_to_ENSMUST00000110682_5end|description=CAGE_peak_6_at_Zic2_5end|id=chr14:122874406..122874413,+|ontology_enrichment_celltype=CL:0000117!2.13e-13!23;CL:0000337!2.13e-13!23;CL:0002319!1.72e-12!43;CL:0000221!4.41e-12!44;CL:0000133!4.41e-12!44;CL:0000055!5.59e-10!50;CL:0000540!2.12e-09!33;CL:0000047!2.12e-09!33;CL:0000031!2.12e-09!33;CL:0000404!2.12e-09!33;CL:0000393!2.32e-07!39;CL:0000211!2.32e-07!39|ontology_enrichment_celltype_v019_2=CL:0000349,4.86e-20,3;CL:0000351,4.86e-20,3;CL:0000708,1.29e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.33e-15!102;UBERON:0000924!1.33e-15!102;UBERON:0006601!1.33e-15!102;UBERON:0001017!1.97e-15!73;UBERON:0005743!1.97e-15!73;UBERON:0000073!8.43e-15!75;UBERON:0001016!8.43e-15!75;UBERON:0000033!1.69e-14!63;UBERON:0002346!2.76e-13!71;UBERON:0003075!2.76e-13!71;UBERON:0007284!2.76e-13!71;UBERON:0001049!8.78e-11!52;UBERON:0005068!8.78e-11!52;UBERON:0006241!8.78e-11!52;UBERON:0007135!8.78e-11!52;UBERON:0003056!1.51e-10!49;UBERON:0002616!2.29e-09!49;UBERON:0000955!4.46e-09!50;UBERON:0006238!4.46e-09!50;UBERON:0007811!1.09e-08!86;UBERON:0000970!2.61e-08!9;UBERON:0000019!2.61e-08!9;UBERON:0000047!2.61e-08!9;UBERON:0004088!2.61e-08!9;UBERON:0002104!2.61e-08!9;UBERON:0001456!2.61e-08!9;UBERON:0003072!2.61e-08!9;UBERON:0003071!2.61e-08!9;UBERON:0004128!2.61e-08!9;UBERON:0000153!4.11e-08!94;UBERON:0002020!5.47e-08!34;UBERON:0003076!9.61e-08!12;UBERON:0003057!9.61e-08!12;UBERON:0000020!1.36e-07!12;UBERON:0001032!1.36e-07!12;UBERON:0004456!1.36e-07!12;UBERON:0005085!6.72e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.86e-20,3;UBERON:0000307,4.86e-20,3;UBERON:0007010,4.86e-20,3;UBERON:0002037,8.06e-16,4;UBERON:0002680,8.06e-16,4;UBERON:0001895,8.06e-16,4;UBERON:0010092,8.06e-16,4;UBERON:0006215,8.06e-16,4;UBERON:0004733,6.82e-11,6;UBERON:0004732,6.82e-11,6;UBERON:0002028,6.82e-11,6;UBERON:0007277,6.82e-11,6;UBERON:0003210,1.29e-08,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0.419959264876088,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,2.03306719241479,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.153606533256243,1.45074916503213,0.548925861614458,0.52091337055676,0.558365998002762,0,0,0.294628585473668,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9772735491963,3.56059401582874,0,0,0,0,0,0.457500602818626,0,0,0,0.62336413367868,0,0,0,0,0,0.260240885925407,0,0.180062129805349,0.452114453507145,0.272145996605311,0.2562274405697,0.374806898238915,0.517406741478031,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.428674070063185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33191572024439,1.70456327558004,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0.309873682371932,0,0,0,0,0.191288332068843,0,0|short_description=p6@Zic2}} | ||
|EntrezGene=22772 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=D3YXF6 | |||
|association_with_transcript=-190bp_to_ENSMUST00000110682_5end | |||
|description=CAGE_peak_6_at_Zic2_5end | |||
|id=chr14:122874406..122874413,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.13e-13!23;CL:0000337!2.13e-13!23;CL:0002319!1.72e-12!43;CL:0000221!4.41e-12!44;CL:0000133!4.41e-12!44;CL:0000055!5.59e-10!50;CL:0000540!2.12e-09!33;CL:0000047!2.12e-09!33;CL:0000031!2.12e-09!33;CL:0000404!2.12e-09!33;CL:0000393!2.32e-07!39;CL:0000211!2.32e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.86e-20,3;CL:0000351,4.86e-20,3;CL:0000708,1.29e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.33e-15!102;UBERON:0000924!1.33e-15!102;UBERON:0006601!1.33e-15!102;UBERON:0001017!1.97e-15!73;UBERON:0005743!1.97e-15!73;UBERON:0000073!8.43e-15!75;UBERON:0001016!8.43e-15!75;UBERON:0000033!1.69e-14!63;UBERON:0002346!2.76e-13!71;UBERON:0003075!2.76e-13!71;UBERON:0007284!2.76e-13!71;UBERON:0001049!8.78e-11!52;UBERON:0005068!8.78e-11!52;UBERON:0006241!8.78e-11!52;UBERON:0007135!8.78e-11!52;UBERON:0003056!1.51e-10!49;UBERON:0002616!2.29e-09!49;UBERON:0000955!4.46e-09!50;UBERON:0006238!4.46e-09!50;UBERON:0007811!1.09e-08!86;UBERON:0000970!2.61e-08!9;UBERON:0000019!2.61e-08!9;UBERON:0000047!2.61e-08!9;UBERON:0004088!2.61e-08!9;UBERON:0002104!2.61e-08!9;UBERON:0001456!2.61e-08!9;UBERON:0003072!2.61e-08!9;UBERON:0003071!2.61e-08!9;UBERON:0004128!2.61e-08!9;UBERON:0000153!4.11e-08!94;UBERON:0002020!5.47e-08!34;UBERON:0003076!9.61e-08!12;UBERON:0003057!9.61e-08!12;UBERON:0000020!1.36e-07!12;UBERON:0001032!1.36e-07!12;UBERON:0004456!1.36e-07!12;UBERON:0005085!6.72e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.86e-20,3;UBERON:0000307,4.86e-20,3;UBERON:0007010,4.86e-20,3;UBERON:0002037,8.06e-16,4;UBERON:0002680,8.06e-16,4;UBERON:0001895,8.06e-16,4;UBERON:0010092,8.06e-16,4;UBERON:0006215,8.06e-16,4;UBERON:0004733,6.82e-11,6;UBERON:0004732,6.82e-11,6;UBERON:0002028,6.82e-11,6;UBERON:0007277,6.82e-11,6;UBERON:0003210,1.29e-08,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0.419959264876088,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,2.03306719241479,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.153606533256243,1.45074916503213,0.548925861614458,0.52091337055676,0.558365998002762,0,0,0.294628585473668,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9772735491963,3.56059401582874,0,0,0,0,0,0.457500602818626,0,0,0,0.62336413367868,0,0,0,0,0,0.260240885925407,0,0.180062129805349,0.452114453507145,0.272145996605311,0.2562274405697,0.374806898238915,0.517406741478031,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.428674070063185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33191572024439,1.70456327558004,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0.309873682371932,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p6@Zic2 | |||
}} |
Revision as of 01:37, 13 September 2013
Short description: | p6@Zic2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Zic2_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -190bp_to_ENSMUST00000110682_5end |
EntrezGene: | Zic2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.86e-20 | 3 |
trophoblast cell | 4.86e-20 | 3 |
leptomeningeal cell | 1.29e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 4.86e-20 | 3 |
blastula | 4.86e-20 | 3 |
cleaving embryo | 4.86e-20 | 3 |
cerebellum | 8.06e-16 | 4 |
regional part of metencephalon | 8.06e-16 | 4 |
metencephalon | 8.06e-16 | 4 |
future metencephalon | 8.06e-16 | 4 |
rhombic lip | 8.06e-16 | 4 |
segmental subdivision of hindbrain | 6.82e-11 | 6 |
segmental subdivision of nervous system | 6.82e-11 | 6 |
hindbrain | 6.82e-11 | 6 |
presumptive hindbrain | 6.82e-11 | 6 |
blood-cerebrospinal fluid barrier | 1.29e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.