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FFCP PHASE1:Mm9::chr9:21420596..21420607,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20586|HGNC=|UniProt=Q3TKT4,Q3URH5|association_with_transcript=-5bp_to_ENSMUST00000034707,ENSMUST00000098946,ENSMUST00000098948,NM_001174078,NM_001174079,NM_011417,uc009omd.2,uc009ome.2,uc012gph.1_5end|description=CAGE_peak_4_at_Smarca4_5end|id=chr9:21420596..21420607,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.58e-10!51|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.51e-10,51|phase1_expression=1.76163731815273,6.2815573375085,8.18998630901165,6.65421264875026,3.00537437967808,4.8684988854448,3.73780224952841,5.93967287831251,4.22366166455,4.44722600011788,2.05461561870606,3.43020283679947,6.67682846731702,4.54586092578786,3.33109761815663,4.04950534779652,4.89693314689703,3.94327706697797,5.34746291062381,2.97072756258621,3.48677489619386,1.78723712161594,0.522399578277871,3.83981814704176,2.2940928106717,5.7423196411502,1.7230479846363,2.37018355954478,3.23039813075836,4.53654233567875,1.10865255327652,0,4.30545351309199,0,3.75507105676657,2.82598897109437,3.26670970019791,4.60384793810598,2.3440060335714,5.23523743973798,2.94115744015507,6.14740936462601,3.88408282424923,0.755380907853464,1.11514624341466,0.734187008646726,1.56478268869608,1.09012578190223,2.19686182734472,1.74986909166855,1.95980990275508,1.43752564364972,5.5368259999053,5.07753499407941,7.05796978199174,1.80081605225163,0.573066879877513,1.03134418455488,1.61853168687678,3.1739458756322,0.633831403506179,2.03306719241479,1.77858959222228,5.39939830368839,3.9554654502679,3.5524005747305,1.49800055259202,1.92109152660777,1.8664130215526,1.62007125998029,2.73422449756797,3.42781181284564,0.662605622854841,2.32732518508413,2.77951865952885,1.83843757322004,6.60695285996332,4.34136949489638,5.9906547969935,2.76961204233407,3.38504281328916,1.04182674111352,6.42120897703176,2.8138130501584,3.97275444219706,2.06240009831567,1.99320353118744,2.23679334990361,2.65041676666144,4.98772296704784,3.47837386442013,0.860423876981386,4.0798280022465,5.39703191637817,3.89865850468601,4.03224198387602,4.49422144421606,1.36344258062446,0.519572009205738,1.41335829804136,1.26759077799012,0,0,0,1.08245520505607,0.506719730950197,1.01104889002957,3.4255163915718,6.47344709117929,2.82040064223167,2.77576522825817,3.65358573974569,2.53677046981664,2.26083960828934,1.99900802130698,4.02133092254962,7.16865406429684,3.47038456607788,7.07688441559899,4.20593809863264,4.19598885074748,2.90925151881133,1.86391761218122,5.85561594023094,4.39838084308256,6.13096932500619,3.23500836165985,0.599902730993408,3.55796635804581,4.6435098215495,3.20250421973039,2.51308704225729,3.65031072403781,3.06858548796397,4.77912502486988,3.40706652442291,1.32391173005411,3.98102305952298,4.29628689337247,6.31325567659422,3.25301107406759,0,1.80062129805349,1.05493372485001,2.04109497453984,2.69038812598185,2.15513966487376,3.10444044886819,3.01795190105979,1.32374256117473,1.93546236580344,0.876782929710299,2.22437799380478,2.43776516565517,2.46938563689532,2.38841120182192,4.91549231119264,2.05878325691772,2.84163499395593,2.48550927042602,2.11073453982987,1.98068267607116,1.65721314909647,1.77087808572663,1.69693824176116,2.55787339225449,3.75582761959467,3.97002164048376,2.96207729844265,2.62667942526552,4.13450928683864,3.36259971078264,3.07370161407471,4.02619256281115,4.20579897128254,1.02904612379284,5.61711931072457,5.81791246659797,3.19932375802851,2.09013004674395,2.70621668776396,3.42861991859682,4.00280478920767,2.66315876557583,6.16887780007865,3.12928013975621,3.77002813200404,3.97912944082302,4.67913809085888,4.49409704327111,5.40345124686736,5.37681437786791,1.89667900953082,2.62771579002376,2.25415471346161,2.44381593414377,2.32742984601151,2.24434623649019,2.78240763346732,3.98547399544926,3.61097074035162,3.20832626196681,4.74324203339438,6.17326891149548,4.91397487783007,5.62155280962134,5.68008339887808,4.3411888755435,2.03700681425136,3.74004978686054,0.972811360650212,2.74561413188081,1.43768206527355,1.86070473834252,3.43241440426017,1.51547326768267,3.76734568396016,2.8946611281802,3.69506380333209,0.568474235311454,2.11854469374634,2.03694102930226,3.52035372432753,2.68010011906905,4.04674189506223,2.92700471786698,2.52216230569906,2.6575762757853,2.55127629851979,3.76885623846197,3.7990696010497,3.03763023021174,6.03165135757089,0.54390568381871,7.37646409528554,2.75936746304733,4.81651769963376,6.32943107597897,1.14754461763673,3.53459298086122,0.94652465824877,1.95219372148319,1.29254038639679,1.67278158566786,1.11399337041197,0.566153061577665,1.21443210502468,0,0,4.4984984299053,3.26462195979018,1.95872164033981,2.11753047159649,6.10389454998381,5.30980553359851,2.18502572539483,2.41858845571801,3.77210159511796,5.31543407185391,1.84461088766356,1.29214146584111,2.54473610634254,1.78248689192361,4.74055136903724,0,4.12542172992747,4.42571487479924,1.98067203434441,2.58717367565509,1.50035924522115,3.72414490648775,2.31879462882692,3.29098041204242,4.26250928760439,3.98941903708308,1.48282449604674,7.05690873775878,6.10079135883476,2.26050197374268,2.89502039655148,4.17803204010978,2.79039529566604,4.95517422270746,5.7481843623258,4.27177201994632,3.50857675537478,1.29636169158798,4.89757988212197,7.79157098009843,5.71945433016307,5.43930975980337,4.05859211738608,3.86959926652387,5.72802370809068,2.05618395827738,1.82987520414164,2.26811215725783,2.50905955217362,1.52853794622324,3.77620169877498,4.05001933054146,5.75863072364865,3.11075935900303,1.86401793926078,2.81846469342095,1.49516546043979,1.48912641411388,2.72231663681667,1.54991788173277,2.70329800785245,1.64300134104056,2.21347454234715,2.30690557736564,3.8653459332161,2.59227005632079,3.16011120628178,1.41907650703115,3.59488350076895,3.76770386635606,4.11761400035207,5.76175928865668,4.08664528367894,3.83992770653901,4.74542314756294,4.03896075271499,5.24296162711571,4.77543615624787,4.13710919053417,4.9088298916259,4.30787728868902,2.44184548711471,0.897138566094757,1.17519231454855,5.40930863290133,3.56596703357246,5.49454872801795,6.00231461421384,3.51100472824754,3.3885110557024,2.76195141904306,5.15605962095457,1.3748254587495,0,2.2661816921691,2.70009000092722,3.15224842256954,3.62513927187364,4.14208249401456,1.55681021376265,5.1873233542134,2.39027048055788,2.18796045361465,3.14419743941973,2.02227859295016,2.22246727801615,2.88449080134452,0.962757628775446,3.28506375292937,1.52087579934144,2.45214243801899,3.7456602987953,2.56100609619477,3.0440798546475,6.19181798667996,2.66533949673168,2.89363830695558,2.06042950401653,3.82717192349433,0.685738504770831,3.37204031702741,1.90748951957857,3.63366041580821,1.97629698872194,2.876896668317,3.47563148458268,2.10455769150274,2.03706170768793,4.48913817326191,2.01679530811096,2.65962102414021,1.63692417267876,2.01417893541756,2.89359916471712,2.24829520144151,2.57324769289949,3.00819475667618,3.06061331310149,1.98532277207564,2.08681052058379|short_description=p4@Smarca4}}
|EntrezGene=20586
|HGNC=
|UniProt=Q3TKT4,Q3URH5
|association_with_transcript=-5bp_to_ENSMUST00000034707,ENSMUST00000098946,ENSMUST00000098948,NM_001174078,NM_001174079,NM_011417,uc009omd.2,uc009ome.2,uc012gph.1_5end
|description=CAGE_peak_4_at_Smarca4_5end
|id=chr9:21420596..21420607,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!9.58e-10!51
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.51e-10,51
|phase1_expression=1.76163731815273,6.2815573375085,8.18998630901165,6.65421264875026,3.00537437967808,4.8684988854448,3.73780224952841,5.93967287831251,4.22366166455,4.44722600011788,2.05461561870606,3.43020283679947,6.67682846731702,4.54586092578786,3.33109761815663,4.04950534779652,4.89693314689703,3.94327706697797,5.34746291062381,2.97072756258621,3.48677489619386,1.78723712161594,0.522399578277871,3.83981814704176,2.2940928106717,5.7423196411502,1.7230479846363,2.37018355954478,3.23039813075836,4.53654233567875,1.10865255327652,0,4.30545351309199,0,3.75507105676657,2.82598897109437,3.26670970019791,4.60384793810598,2.3440060335714,5.23523743973798,2.94115744015507,6.14740936462601,3.88408282424923,0.755380907853464,1.11514624341466,0.734187008646726,1.56478268869608,1.09012578190223,2.19686182734472,1.74986909166855,1.95980990275508,1.43752564364972,5.5368259999053,5.07753499407941,7.05796978199174,1.80081605225163,0.573066879877513,1.03134418455488,1.61853168687678,3.1739458756322,0.633831403506179,2.03306719241479,1.77858959222228,5.39939830368839,3.9554654502679,3.5524005747305,1.49800055259202,1.92109152660777,1.8664130215526,1.62007125998029,2.73422449756797,3.42781181284564,0.662605622854841,2.32732518508413,2.77951865952885,1.83843757322004,6.60695285996332,4.34136949489638,5.9906547969935,2.76961204233407,3.38504281328916,1.04182674111352,6.42120897703176,2.8138130501584,3.97275444219706,2.06240009831567,1.99320353118744,2.23679334990361,2.65041676666144,4.98772296704784,3.47837386442013,0.860423876981386,4.0798280022465,5.39703191637817,3.89865850468601,4.03224198387602,4.49422144421606,1.36344258062446,0.519572009205738,1.41335829804136,1.26759077799012,0,0,0,1.08245520505607,0.506719730950197,1.01104889002957,3.4255163915718,6.47344709117929,2.82040064223167,2.77576522825817,3.65358573974569,2.53677046981664,2.26083960828934,1.99900802130698,4.02133092254962,7.16865406429684,3.47038456607788,7.07688441559899,4.20593809863264,4.19598885074748,2.90925151881133,1.86391761218122,5.85561594023094,4.39838084308256,6.13096932500619,3.23500836165985,0.599902730993408,3.55796635804581,4.6435098215495,3.20250421973039,2.51308704225729,3.65031072403781,3.06858548796397,4.77912502486988,3.40706652442291,1.32391173005411,3.98102305952298,4.29628689337247,6.31325567659422,3.25301107406759,0,1.80062129805349,1.05493372485001,2.04109497453984,2.69038812598185,2.15513966487376,3.10444044886819,3.01795190105979,1.32374256117473,1.93546236580344,0.876782929710299,2.22437799380478,2.43776516565517,2.46938563689532,2.38841120182192,4.91549231119264,2.05878325691772,2.84163499395593,2.48550927042602,2.11073453982987,1.98068267607116,1.65721314909647,1.77087808572663,1.69693824176116,2.55787339225449,3.75582761959467,3.97002164048376,2.96207729844265,2.62667942526552,4.13450928683864,3.36259971078264,3.07370161407471,4.02619256281115,4.20579897128254,1.02904612379284,5.61711931072457,5.81791246659797,3.19932375802851,2.09013004674395,2.70621668776396,3.42861991859682,4.00280478920767,2.66315876557583,6.16887780007865,3.12928013975621,3.77002813200404,3.97912944082302,4.67913809085888,4.49409704327111,5.40345124686736,5.37681437786791,1.89667900953082,2.62771579002376,2.25415471346161,2.44381593414377,2.32742984601151,2.24434623649019,2.78240763346732,3.98547399544926,3.61097074035162,3.20832626196681,4.74324203339438,6.17326891149548,4.91397487783007,5.62155280962134,5.68008339887808,4.3411888755435,2.03700681425136,3.74004978686054,0.972811360650212,2.74561413188081,1.43768206527355,1.86070473834252,3.43241440426017,1.51547326768267,3.76734568396016,2.8946611281802,3.69506380333209,0.568474235311454,2.11854469374634,2.03694102930226,3.52035372432753,2.68010011906905,4.04674189506223,2.92700471786698,2.52216230569906,2.6575762757853,2.55127629851979,3.76885623846197,3.7990696010497,3.03763023021174,6.03165135757089,0.54390568381871,7.37646409528554,2.75936746304733,4.81651769963376,6.32943107597897,1.14754461763673,3.53459298086122,0.94652465824877,1.95219372148319,1.29254038639679,1.67278158566786,1.11399337041197,0.566153061577665,1.21443210502468,0,0,4.4984984299053,3.26462195979018,1.95872164033981,2.11753047159649,6.10389454998381,5.30980553359851,2.18502572539483,2.41858845571801,3.77210159511796,5.31543407185391,1.84461088766356,1.29214146584111,2.54473610634254,1.78248689192361,4.74055136903724,0,4.12542172992747,4.42571487479924,1.98067203434441,2.58717367565509,1.50035924522115,3.72414490648775,2.31879462882692,3.29098041204242,4.26250928760439,3.98941903708308,1.48282449604674,7.05690873775878,6.10079135883476,2.26050197374268,2.89502039655148,4.17803204010978,2.79039529566604,4.95517422270746,5.7481843623258,4.27177201994632,3.50857675537478,1.29636169158798,4.89757988212197,7.79157098009843,5.71945433016307,5.43930975980337,4.05859211738608,3.86959926652387,5.72802370809068,2.05618395827738,1.82987520414164,2.26811215725783,2.50905955217362,1.52853794622324,3.77620169877498,4.05001933054146,5.75863072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|short_description=p4@Smarca4
}}

Revision as of 17:26, 14 September 2013

Short description:p4@Smarca4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Smarca4_5end
Coexpression cluster:NA
Association with transcript: -5bp_to_ENSMUST00000034707, ENSMUST00000098946, ENSMUST00000098948, NM_001174078, NM_001174079, NM_011417, uc009omd.2, uc009ome.2, uc012gph.1_5end
EntrezGene:Smarca4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Smarca4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.65
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.87
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.43
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.35
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.54
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F94.99
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I34.02
amnion, adult pregnant day17.5.CNhs10488.583-22A87.17
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G46.31
eyeball, embryo E12.CNhs11016.345-16C63.25
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G14.13
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A35.82
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G15.38
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.24
kidney, neonate N10.CNhs11206.758-6D52.78
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H13.21
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F86.17
liver, embryo E13.CNhs10524.378-3H64.91
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A36.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I73.26
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G66.10
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F87.06
skin, adult.CNhs10492.30-1C36.10
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H32.90
skin, neonate N06.CNhs11097.693-20I54.18
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G24.27
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D14.90
spleen, neonate N20.CNhs11112.824-19H17.79
spleen, neonate N25.CNhs11099.1354-25G35.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.87
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A94.05
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I23.59
thymus, embryo E16.CNhs11002.456-26C53.77
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G45.76
thymus, neonate N02.CNhs11181.1541-43F84.09
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C44.75
thymus, neonate N07.CNhs11211.713-19D34.04
thymus, neonate N10.CNhs11194.748-24E45.24
thymus, neonate N20.CNhs11186.820-7A24.78
thymus, neonate N25.CNhs11125.1362-25G74.14
thymus, neonate N30.CNhs11132.1393-42G24.91
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D56.00
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B42.09





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism9.51e-1051







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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