FFCP PHASE1:Mm9::chr13:104710511..104710564,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=59079|HGNC=|MCL_coexpression_id=2812|UniProt=E9QPY5,Q80TH2,B2RUK2,B7ZNY4,B7ZNX6,B2RUJ2|association_with_transcript=29bp_to_ENSMUST00000022222,ENSMUST00000053927,ENSMUST00000091269,NM_001005868,NM_021563,uc007rsk.2,uc007rsl.1,uc007rsm.1,uc007rsn.1,uc011zed.1,uc011zee.1_5end|description=CAGE_peak_4_at_Erbb2ip_5end|id=chr13:104710511..104710564,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.78e-10!130;UBERON:0000925!3.78e-10!130;UBERON:0006595!3.78e-10!130;UBERON:0001007!1.48e-09!128;UBERON:0001555!1.48e-09!128;UBERON:0007026!1.48e-09!128;UBERON:0004921!4.07e-09!126;UBERON:0004185!4.07e-09!126|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.33e-12,118;UBERON:0000925,5.33e-12,118;UBERON:0006595,5.33e-12,118;UBERON:0001007,2.41e-11,116;UBERON:0001555,2.41e-11,116;UBERON:0007026,2.41e-11,116;UBERON:0004921,7.35e-11,114;UBERON:0000160,2.29e-08,31;UBERON:0005409,1.59e-07,47|phase1_expression=1.28119077683835,14.3079917132138,15.9249733786338,14.215817931421,12.0214975187123,4.70061961353291,2.80335168714631,4.77756296733832,45.193179810685,49.1535505276186,8.38968044304974,5.50427897067821,4.45121897821135,3.58423649917889,1.33243904726265,1.01237633694913,3.49780939064073,1.57731082679119,1.64537320326887,1.69755860719212,2.38121212422995,3.67376519443276,1.82839852397255,4.15980299262857,2.52350209173887,16.0784949952206,6.46142994238612,6.46413698057667,7.41091335879858,10.0812051903972,4.8780712344167,0,0.61506478758457,0,0.866554859253824,1.16364251750945,2.45003227514843,13.811543814318,12.5013655123808,12.5645698553712,22.9410280332096,11.6117732442936,15.0508209439658,1.1330713617802,1.72340783073175,1.10128051297009,1.56478268869608,1.30815093828268,0.219686182734472,0.972149495371417,0.139986421625363,1.43752564364972,1.51004345451963,6.5282592781021,3.36093799142464,3.34437266846731,2.86533439938757,2.57836046138721,0.606949382578793,0,0,0.338844532069132,0.889294796111139,3.1496490104849,3.9554654502679,1.4209602298922,0.299600110518405,0.768436610643109,0.207379224616955,0,0.210324961351382,0.856952953211411,0.441737081903227,0,0,0,2.20231761998777,1.14918604276669,1.68967186581868,0,0.0914876436024097,0,0,1.68828783009504,1.06958773443767,0.883885756421003,0.284743361598206,0,6.6639050133202,6.19686792875641,8.40607017234866,1.72084775396277,4.75979933595425,0.539703191637817,0.649776417447669,0.896053774194671,1.96622188184453,2.38602451609281,0.519572009205738,1.41335829804136,0.704217098883403,0,0,0,1.5154372870785,1.01343946190039,1.51657333504435,4.22480354960522,4.66088190564909,1.7813056687779,0.693941307064543,0.304465478312141,0.461230994512117,1.20578112442098,2.70454026412121,0.502666365318702,4.44950941921873,1.3013942122792,1.76922110389975,1.94120219936891,3.3126227769059,0.969750506270444,0,0,1.04723353406728,7.91916871146633,12.1013275750979,7.7987355029143,8.25956475974921,1.04853447583376,0.457500602818626,0.251308704225729,0.173824320192276,1.53429274398198,0.41557608911912,0.811206315338788,1.2220723662038,2.23932547098167,1.0108910337347,2.73574412652416,0.780722657776222,0.459804208866946,0.900310649026746,0.90422890701429,1.7009124787832,0.512454881139399,1.03071897015702,2.58703370739016,0.431135985865684,0.567318240503458,0.527853372491847,0.219195732427575,1.11218899690239,2.78601733217733,1.64625709126355,0.796137067273973,7.72434506044558,3.86021860672073,8.24074148247219,0,2.81431271977315,1.2604344302271,0.710234206755631,0.590292695242212,0.617068451549513,1.16266972375204,1.3413670069981,2.33530684734339,1.15191894939436,1.64167464079095,2.1888578577381,0.877199924551994,1.53685080703735,2.14730270016595,0.841159794256509,0.720332286654991,16.8513579321737,2.90895623329899,0,0.232236671860439,2.31961430379768,3.42861991859682,4.00280478920767,5.51654315726422,5.69434873853414,6.0938613247884,11.5614196048124,12.5342577385925,7.40863531052657,6.29173586057955,7.13255564586491,10.1562049359727,0.189667900953082,0.456994050438915,3.38123207019241,1.01825663922657,1.55161989734101,3.0158402552837,2.40298841072178,2.36176236767363,3.61097074035162,3.70191491765402,2.07516838961004,1.00107063429656,0.589676985339609,1.57403478669398,1.62288097110802,1.4470629585145,2.29163266603278,2.30156909960649,3.40483976227574,1.37280706594041,7.18841032636773,2.97712758134803,2.18426371180192,1.51547326768267,1.4351793081753,2.8946611281802,4.0645701836653,0.568474235311454,1.14075483509418,0.509235257325564,0.704070744865506,2.01007508930179,2.85652369063216,3.70753930929818,3.94087860265477,5.75808193086815,3.98636921643718,7.53771247692395,8.63424909329478,5.64131328467895,12.0633027151418,3.80733978673097,8.85175691434265,6.62248191131358,1.28440471990234,2.10981035865966,0.655739781506702,1.76729649043061,1.26203287766503,2.73307121007647,1.93881057959519,4.30143836314594,4.67877215573028,3.39691836946599,2.83367491172426,2.33804686329049,2.37172666767914,0.963963949265421,1.70328102249922,0.712262414669021,1.30309567482861,1.48473110675282,2.65490276679926,0.971122544619926,0.604647113929502,1.13163047853539,0,2.45948118355142,7.23599220871019,1.45413491791002,1.42598951353889,1.58018378967908,0,2.06271086496374,1.02131881726136,0.540183282093931,0.258717367565509,0.428674070063185,1.06404140185364,1.24858172321449,0.987294123612726,0.608929898229199,4.69343416127421,3.81297727554876,2.42581237860458,1.15420377059036,2.42196640043858,1.26657142349127,1.19372344003136,2.46211349617592,6.70405924248657,2.41052892613663,2.05045056957423,0.619160603889667,2.96311243791539,1.88368457004691,1.23024804948923,2.28778173206523,12.2384469595576,16.0944170172207,11.3323978519628,0,1.42351197111511,0.609958401380546,1.18805874903981,2.92723614420256,3.49380101993884,2.29269388854195,4.54594006489348,4.18809507174447,9.0730481304255,6.83473244395618,0,0.897099276263873,0.330916980914195,0.777804753376191,0.387479470433193,0.337912250981556,1.5256441023948,1.3020438484395,0.838874755405687,0.241584120826006,0.864090018773596,2.21207784439725,1.41907650703115,1.02710957164827,2.07873316764472,1.9692936523423,2.38417625737518,2.88469078847925,2.80610101631697,1.9183625490148,2.362411006305,1.51239277705261,2.63136277997332,4.13710919053417,3.97381467417334,3.40095575422817,0.443971906748129,0.179427713218951,0.671538465456314,2.89784391048286,2.43987218086537,1.64836461840539,2.35805216986972,1.50471631210609,1.12950368523413,0,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0.31136204275253,0.798049746802062,0.341467211508268,0.486213434136588,0.419226325255965,0.919217542250071,2.00022055021454,1.03017528619447,2.56735367673452,1.51618327058278,3.29523089857312,1.69763707247469,0.842773567228942,1.53660365771686,1.83793500657962,0.952587382566147,1.62238056322798,1.54327376370964,3.70877310722976,1.03039244094078,1.02860775715625,1.4198064492747,0.715308569841963,1.16277133305863,1.50575008664529,1.60767754994185,0.914639864363863,1.05227884575137,1.35804113845862,1.68342681497322,1.54225523561426,1.0835493061312,1.22769312950907,1.08455788830176,1.54325288784913,1.24905288968973,1.40358965067245,2.14871054048298,2.67803664896381,2.8676884485537,0.463735671240843|short_description=p4@Erbb2ip}} | ||
|EntrezGene=59079 | |||
|HGNC= | |||
|MCL_coexpression_id=2812 | |||
|UniProt=E9QPY5,Q80TH2,B2RUK2,B7ZNY4,B7ZNX6,B2RUJ2 | |||
|association_with_transcript=29bp_to_ENSMUST00000022222,ENSMUST00000053927,ENSMUST00000091269,NM_001005868,NM_021563,uc007rsk.2,uc007rsl.1,uc007rsm.1,uc007rsn.1,uc011zed.1,uc011zee.1_5end | |||
|description=CAGE_peak_4_at_Erbb2ip_5end | |||
|id=chr13:104710511..104710564,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.78e-10!130;UBERON:0000925!3.78e-10!130;UBERON:0006595!3.78e-10!130;UBERON:0001007!1.48e-09!128;UBERON:0001555!1.48e-09!128;UBERON:0007026!1.48e-09!128;UBERON:0004921!4.07e-09!126;UBERON:0004185!4.07e-09!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.33e-12,118;UBERON:0000925,5.33e-12,118;UBERON:0006595,5.33e-12,118;UBERON:0001007,2.41e-11,116;UBERON:0001555,2.41e-11,116;UBERON:0007026,2.41e-11,116;UBERON:0004921,7.35e-11,114;UBERON:0000160,2.29e-08,31;UBERON:0005409,1.59e-07,47 | |||
|phase1_expression=1.28119077683835,14.3079917132138,15.9249733786338,14.215817931421,12.0214975187123,4.70061961353291,2.80335168714631,4.77756296733832,45.193179810685,49.1535505276186,8.38968044304974,5.50427897067821,4.45121897821135,3.58423649917889,1.33243904726265,1.01237633694913,3.49780939064073,1.57731082679119,1.64537320326887,1.69755860719212,2.38121212422995,3.67376519443276,1.82839852397255,4.15980299262857,2.52350209173887,16.0784949952206,6.46142994238612,6.46413698057667,7.41091335879858,10.0812051903972,4.8780712344167,0,0.61506478758457,0,0.866554859253824,1.16364251750945,2.45003227514843,13.811543814318,12.5013655123808,12.5645698553712,22.9410280332096,11.6117732442936,15.0508209439658,1.1330713617802,1.72340783073175,1.10128051297009,1.56478268869608,1.30815093828268,0.219686182734472,0.972149495371417,0.139986421625363,1.43752564364972,1.51004345451963,6.5282592781021,3.36093799142464,3.34437266846731,2.86533439938757,2.57836046138721,0.606949382578793,0,0,0.338844532069132,0.889294796111139,3.1496490104849,3.9554654502679,1.4209602298922,0.299600110518405,0.768436610643109,0.207379224616955,0,0.210324961351382,0.856952953211411,0.441737081903227,0,0,0,2.20231761998777,1.14918604276669,1.68967186581868,0,0.0914876436024097,0,0,1.68828783009504,1.06958773443767,0.883885756421003,0.284743361598206,0,6.6639050133202,6.19686792875641,8.40607017234866,1.72084775396277,4.75979933595425,0.539703191637817,0.649776417447669,0.896053774194671,1.96622188184453,2.38602451609281,0.519572009205738,1.41335829804136,0.704217098883403,0,0,0,1.5154372870785,1.01343946190039,1.51657333504435,4.22480354960522,4.66088190564909,1.7813056687779,0.693941307064543,0.304465478312141,0.461230994512117,1.20578112442098,2.70454026412121,0.502666365318702,4.44950941921873,1.3013942122792,1.76922110389975,1.94120219936891,3.3126227769059,0.969750506270444,0,0,1.04723353406728,7.91916871146633,12.1013275750979,7.7987355029143,8.25956475974921,1.04853447583376,0.457500602818626,0.251308704225729,0.173824320192276,1.53429274398198,0.41557608911912,0.811206315338788,1.2220723662038,2.23932547098167,1.0108910337347,2.73574412652416,0.780722657776222,0.459804208866946,0.900310649026746,0.90422890701429,1.7009124787832,0.512454881139399,1.03071897015702,2.58703370739016,0.431135985865684,0.567318240503458,0.527853372491847,0.219195732427575,1.11218899690239,2.78601733217733,1.64625709126355,0.796137067273973,7.72434506044558,3.86021860672073,8.24074148247219,0,2.81431271977315,1.2604344302271,0.710234206755631,0.590292695242212,0.617068451549513,1.16266972375204,1.3413670069981,2.33530684734339,1.15191894939436,1.64167464079095,2.1888578577381,0.877199924551994,1.53685080703735,2.14730270016595,0.841159794256509,0.720332286654991,16.8513579321737,2.90895623329899,0,0.232236671860439,2.31961430379768,3.42861991859682,4.00280478920767,5.51654315726422,5.69434873853414,6.0938613247884,11.5614196048124,12.5342577385925,7.40863531052657,6.29173586057955,7.13255564586491,10.1562049359727,0.189667900953082,0.456994050438915,3.38123207019241,1.01825663922657,1.55161989734101,3.0158402552837,2.40298841072178,2.36176236767363,3.61097074035162,3.70191491765402,2.07516838961004,1.00107063429656,0.589676985339609,1.57403478669398,1.62288097110802,1.4470629585145,2.29163266603278,2.30156909960649,3.40483976227574,1.37280706594041,7.18841032636773,2.97712758134803,2.18426371180192,1.51547326768267,1.4351793081753,2.8946611281802,4.0645701836653,0.568474235311454,1.14075483509418,0.509235257325564,0.704070744865506,2.01007508930179,2.85652369063216,3.70753930929818,3.94087860265477,5.75808193086815,3.98636921643718,7.53771247692395,8.63424909329478,5.64131328467895,12.0633027151418,3.80733978673097,8.85175691434265,6.62248191131358,1.28440471990234,2.10981035865966,0.655739781506702,1.76729649043061,1.26203287766503,2.73307121007647,1.93881057959519,4.30143836314594,4.67877215573028,3.39691836946599,2.83367491172426,2.33804686329049,2.37172666767914,0.963963949265421,1.70328102249922,0.712262414669021,1.30309567482861,1.48473110675282,2.65490276679926,0.971122544619926,0.604647113929502,1.13163047853539,0,2.45948118355142,7.23599220871019,1.45413491791002,1.42598951353889,1.58018378967908,0,2.06271086496374,1.02131881726136,0.540183282093931,0.258717367565509,0.428674070063185,1.06404140185364,1.24858172321449,0.987294123612726,0.608929898229199,4.69343416127421,3.81297727554876,2.42581237860458,1.15420377059036,2.42196640043858,1.26657142349127,1.19372344003136,2.46211349617592,6.70405924248657,2.41052892613663,2.05045056957423,0.619160603889667,2.96311243791539,1.88368457004691,1.23024804948923,2.28778173206523,12.2384469595576,16.0944170172207,11.3323978519628,0,1.42351197111511,0.609958401380546,1.18805874903981,2.92723614420256,3.49380101993884,2.29269388854195,4.54594006489348,4.18809507174447,9.0730481304255,6.83473244395618,0,0.897099276263873,0.330916980914195,0.777804753376191,0.387479470433193,0.337912250981556,1.5256441023948,1.3020438484395,0.838874755405687,0.241584120826006,0.864090018773596,2.21207784439725,1.41907650703115,1.02710957164827,2.07873316764472,1.9692936523423,2.38417625737518,2.88469078847925,2.80610101631697,1.9183625490148,2.362411006305,1.51239277705261,2.63136277997332,4.13710919053417,3.97381467417334,3.40095575422817,0.443971906748129,0.179427713218951,0.671538465456314,2.89784391048286,2.43987218086537,1.64836461840539,2.35805216986972,1.50471631210609,1.12950368523413,0,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0.31136204275253,0.798049746802062,0.341467211508268,0.486213434136588,0.419226325255965,0.919217542250071,2.00022055021454,1.03017528619447,2.56735367673452,1.51618327058278,3.29523089857312,1.69763707247469,0.842773567228942,1.53660365771686,1.83793500657962,0.952587382566147,1.62238056322798,1.54327376370964,3.70877310722976,1.03039244094078,1.02860775715625,1.4198064492747,0.715308569841963,1.16277133305863,1.50575008664529,1.60767754994185,0.914639864363863,1.05227884575137,1.35804113845862,1.68342681497322,1.54225523561426,1.0835493061312,1.22769312950907,1.08455788830176,1.54325288784913,1.24905288968973,1.40358965067245,2.14871054048298,2.67803664896381,2.8676884485537,0.463735671240843 | |||
|short_description=p4@Erbb2ip | |||
}} |
Revision as of 23:46, 12 September 2013
Short description: | p4@Erbb2ip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Erbb2ip_5end |
Coexpression cluster: | MCL_coexpression_mm9:2812 |
Association with transcript: | 29bp_to_ENSMUST00000022222, ENSMUST00000053927, ENSMUST00000091269, NM_001005868, NM_021563, uc007rsk.2, uc007rsl.1, uc007rsm.1, uc007rsn.1, uc011zed.1, uc011zee.1_5end |
EntrezGene: | Erbb2ip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.33e-12 | 118 |
endoderm | 5.33e-12 | 118 |
presumptive endoderm | 5.33e-12 | 118 |
digestive system | 2.41e-11 | 116 |
digestive tract | 2.41e-11 | 116 |
primitive gut | 2.41e-11 | 116 |
subdivision of digestive tract | 7.35e-11 | 114 |
intestine | 2.29e-08 | 31 |
gastrointestinal system | 1.59e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.