FFCP PHASE1:Mm9::chr14:90956535..90956563,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=52|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:90956535..90956563,-|id=chr14:90956535..90956563,-|ontology_enrichment_celltype=CL:0002031!1.70e-08!25;CL:0000738!1.60e-07!17;CL:0002087!1.60e-07!17;CL:0000838!3.17e-07!12|ontology_enrichment_celltype_v019_2=CL:0002031,8.28e-10,25;CL:0000838,5.95e-08,12;CL:0000791,8.83e-08,9;CL:0000789,8.83e-08,9;CL:0002420,8.83e-08,9;CL:0002419,8.83e-08,9;CL:0000790,8.83e-08,9;CL:0000738,1.24e-07,17;CL:0002087,1.24e-07,17;CL:0002320,1.64e-07,46;CL:0000134,1.64e-07,46;CL:0000084,2.93e-07,11;CL:0000827,2.93e-07,11;CL:0000624,4.19e-07,8;CL:0000542,5.94e-07,13;CL:0000051,5.94e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!7.82e-07!130;UBERON:0000925!7.82e-07!130;UBERON:0006595!7.82e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.64e-07,46|phase1_expression=0,0,0.454999239389536,7.86406949397758,7.01254021924886,0,5.60670337429262,10.5881125222093,9.29205566201001,17.3207749478275,4.96532107853964,6.54131703761759,5.13602189793617,4.45844052336887,0.666219523631325,4.85940641735582,13.9912375625629,5.8360500591274,5.21034847701807,3.81950686618227,0.255129870453209,0.794327609607082,6.26879493933445,5.59973479776923,10.5528269290898,0,0,0,7.9809836171677,0,0,13.9706748161119,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.912392380975631,2.0190142737785,2.34717403304412,0.65407546914134,1.09843091367236,0.194429899074283,0.279972843250725,0,6.71130424230945,14.5072428402269,6.38578218370682,0.257259436035947,0,1.03134418455488,0,0.528990979272033,0.633831403506179,1.35537812827653,0,1.3498495759221,0.988866362566974,2.8419204597844,0.898800331555214,1.53687322128622,0.207379224616955,0.405017814995072,0.210324961351382,1.14260393761521,0.662605622854841,0.61245399607477,0.479227355091182,0,0,0.383062014255563,0.921639199537461,0.131886287730194,0.457438218012048,1.04182674111352,1.11673199600552,1.12552522006336,0.45839474333043,0.589257170947335,0.284743361598206,0.186399445825301,1.06016670666458,1.66257432234928,4.92769630792852,18.0689014166091,0,0.539703191637817,2.59910566979068,0.448026887097336,0.140444420131752,1.53387290320252,11.950156211732,2.47337702157238,0,3.84979432242953,15.2883143823987,28.4426681261332,3.030874574157,5.06719730950197,4.04419556011827,0.45673551887624,1.55362730188303,1.63286352971307,0.346970653532272,1.21786191324856,0.922461989024234,1.20578112442098,0.470354828542819,0.251333182659351,1.23597483867187,1.87979163995885,0,0.485300549842228,0.662524555381181,0.484875253135222,5.59175283654366,1.46390398505774,1.67557365450764,1.53274233125155,0,0,0,1.3481157546434,4.57500602818627,0.125654352112864,0.869121600961382,1.53429274398198,0.83115217823824,1.1356888414743,0.305518091550949,0.373220911830279,1.51633655060205,0.841767423545896,0.390361328888111,2.06911893990126,0.540186389416048,1.20563854268572,0.408218994907967,0.896796041993948,0.187403449119458,1.55222022443409,0,1.13463648100692,0.703804496655795,0.876782929710299,1.11218899690239,0.696504333044333,0.411564272815887,0.796137067273973,0,0,1.98914449576915,0.414251545071004,1.17263029990548,1.08037236876609,0.710234206755631,0.590292695242212,0.771335564436891,0.697601834251224,0.804820204198858,0.350296027101508,0.16455984991348,0.820837320395476,0.243206428637567,1.02339991197733,0.439100230582101,0.402619256281115,1.89260953707715,0.411618449517138,2.31293148088659,3.17340679996253,0.639864751605702,0.928946687441754,0.902072229254653,0.80673409849337,1.11189021922435,1.33157938278791,1.89811624617805,0.494096864172033,2.5133520880027,1.39269530428806,1.16978452271472,5.39291645192533,0.864552199498777,1.59313018603494,1.70701110857774,0.799739588268102,1.1270773567308,1.22190796707189,0,0.350679099451593,0.505892296994058,0.738050739898011,1.41298855057237,0.740382983530803,2.37162101669719,0.83422552858047,0.786235980452812,0.224862112384854,0.811440485554012,1.92941727801933,0.763877555344259,2.30156909960649,0.324270453550071,2.47105271869273,2.87536413054709,2.23284568601102,2.49630138491648,2.52578877947112,0.358794827043824,1.4473305640901,1.84753190166605,1.32643988239339,0.814824882210129,1.18821560042632,1.17345124144251,2.01007508930179,0.952174563544055,0.390267295715598,0.945810864637146,1.32878813789265,0.478364305972461,0.81931657357869,1.03610989119537,1.01254341007058,9.04747703635634,8.70249094109935,3.93411418415229,1.37968373152366,1.9266070798535,0.703270119553219,1.63934945376675,1.26235463602186,0.631016438832513,0.780877488593277,0.430846795465598,0.955875191810208,0.891194696329576,0,0.404810701674894,1.16902343164525,0.395287777946524,0.963963949265421,0.567760340833074,0.35613120733451,0.651547837414304,0.824850614862677,3.98235415019888,2.18502572539483,0.302323556964751,1.50884063804718,1.77181135728464,2.15204603560749,0.775284879504663,0.727067458955011,0.712994756769443,1.8962205476149,2.10837217149998,3.0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:90956535..90956563,- | |||
|id=chr14:90956535..90956563,- | |||
|ontology_enrichment_celltype=CL:0002031!1.70e-08!25;CL:0000738!1.60e-07!17;CL:0002087!1.60e-07!17;CL:0000838!3.17e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,8.28e-10,25;CL:0000838,5.95e-08,12;CL:0000791,8.83e-08,9;CL:0000789,8.83e-08,9;CL:0002420,8.83e-08,9;CL:0002419,8.83e-08,9;CL:0000790,8.83e-08,9;CL:0000738,1.24e-07,17;CL:0002087,1.24e-07,17;CL:0002320,1.64e-07,46;CL:0000134,1.64e-07,46;CL:0000084,2.93e-07,11;CL:0000827,2.93e-07,11;CL:0000624,4.19e-07,8;CL:0000542,5.94e-07,13;CL:0000051,5.94e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.82e-07!130;UBERON:0000925!7.82e-07!130;UBERON:0006595!7.82e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.64e-07,46 | |||
|phase1_expression=0,0,0.454999239389536,7.86406949397758,7.01254021924886,0,5.60670337429262,10.5881125222093,9.29205566201001,17.3207749478275,4.96532107853964,6.54131703761759,5.13602189793617,4.45844052336887,0.666219523631325,4.85940641735582,13.9912375625629,5.8360500591274,5.21034847701807,3.81950686618227,0.255129870453209,0.794327609607082,6.26879493933445,5.59973479776923,10.5528269290898,0,0,0,7.9809836171677,0,0,13.9706748161119,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.912392380975631,2.0190142737785,2.34717403304412,0.65407546914134,1.09843091367236,0.194429899074283,0.279972843250725,0,6.71130424230945,14.5072428402269,6.38578218370682,0.257259436035947,0,1.03134418455488,0,0.528990979272033,0.633831403506179,1.35537812827653,0,1.3498495759221,0.988866362566974,2.8419204597844,0.898800331555214,1.53687322128622,0.207379224616955,0.405017814995072,0.210324961351382,1.14260393761521,0.662605622854841,0.61245399607477,0.479227355091182,0,0,0.383062014255563,0.921639199537461,0.131886287730194,0.457438218012048,1.04182674111352,1.11673199600552,1.12552522006336,0.45839474333043,0.589257170947335,0.284743361598206,0.186399445825301,1.06016670666458,1.66257432234928,4.92769630792852,18.0689014166091,0,0.539703191637817,2.59910566979068,0.448026887097336,0.140444420131752,1.53387290320252,11.950156211732,2.47337702157238,0,3.84979432242953,15.2883143823987,28.4426681261332,3.030874574157,5.06719730950197,4.04419556011827,0.45673551887624,1.55362730188303,1.63286352971307,0.346970653532272,1.21786191324856,0.922461989024234,1.20578112442098,0.470354828542819,0.251333182659351,1.23597483867187,1.87979163995885,0,0.485300549842228,0.662524555381181,0.484875253135222,5.59175283654366,1.46390398505774,1.67557365450764,1.53274233125155,0,0,0,1.3481157546434,4.57500602818627,0.125654352112864,0.869121600961382,1.53429274398198,0.83115217823824,1.1356888414743,0.305518091550949,0.373220911830279,1.51633655060205,0.841767423545896,0.390361328888111,2.06911893990126,0.540186389416048,1.20563854268572,0.408218994907967,0.896796041993948,0.187403449119458,1.55222022443409,0,1.13463648100692,0.703804496655795,0.876782929710299,1.11218899690239,0.696504333044333,0.411564272815887,0.796137067273973,0,0,1.98914449576915,0.414251545071004,1.17263029990548,1.08037236876609,0.710234206755631,0.590292695242212,0.771335564436891,0.697601834251224,0.804820204198858,0.350296027101508,0.16455984991348,0.820837320395476,0.243206428637567,1.02339991197733,0.439100230582101,0.402619256281115,1.89260953707715,0.411618449517138,2.31293148088659,3.17340679996253,0.639864751605702,0.928946687441754,0.902072229254653,0.80673409849337,1.11189021922435,1.33157938278791,1.89811624617805,0.494096864172033,2.5133520880027,1.39269530428806,1.16978452271472,5.39291645192533,0.864552199498777,1.59313018603494,1.70701110857774,0.799739588268102,1.1270773567308,1.22190796707189,0,0.350679099451593,0.505892296994058,0.738050739898011,1.41298855057237,0.740382983530803,2.37162101669719,0.83422552858047,0.786235980452812,0.224862112384854,0.811440485554012,1.92941727801933,0.763877555344259,2.30156909960649,0.324270453550071,2.47105271869273,2.87536413054709,2.23284568601102,2.49630138491648,2.52578877947112,0.358794827043824,1.4473305640901,1.84753190166605,1.32643988239339,0.814824882210129,1.18821560042632,1.17345124144251,2.01007508930179,0.952174563544055,0.390267295715598,0.945810864637146,1.32878813789265,0.478364305972461,0.81931657357869,1.03610989119537,1.01254341007058,9.04747703635634,8.70249094109935,3.93411418415229,1.37968373152366,1.9266070798535,0.703270119553219,1.63934945376675,1.26235463602186,0.631016438832513,0.780877488593277,0.430846795465598,0.955875191810208,0.891194696329576,0,0.404810701674894,1.16902343164525,0.395287777946524,0.963963949265421,0.567760340833074,0.35613120733451,0.651547837414304,0.824850614862677,3.98235415019888,2.18502572539483,0.302323556964751,1.50884063804718,1.77181135728464,2.15204603560749,0.775284879504663,0.727067458955011,0.712994756769443,1.8962205476149,2.10837217149998,3.09406629744561,0,0.540183282093931,0.388076051348264,1.28602221018955,1.41872186913819,0.535106452806212,0.987294123612726,1.2178597964584,0.704015124191131,1.90648863777438,3.52845436887939,0.16488625294148,0.968786560175433,0.180938774784468,0.596861720015682,0.820704498725306,1.45740418314925,2.59595422814714,2.22132145037209,1.44470807574256,0.925972636848558,1.69531611304222,0.410082683163076,1.14389086603261,0,0,0,9.54670618015114,1.42351197111511,0.406638934253697,0.540026704109006,0.836353184057875,0.436725127492355,0.674321731924103,0.330613822901344,1.30877970992015,0.90730481304255,2.4853572523477,6.20062232552609,0.598066184175915,0.330916980914195,0.194451188344048,0.516639293910924,0.844780627453891,0.352071715937262,0.13020438484395,0.524296722128554,1.44950472495604,1.72818003754719,2.8441000856536,0.405450430580328,0.616265742988964,0.51968329191118,1.43221356533985,0.39736270956253,0.600977247599844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| |||
|short_description=p@chr14:90956535..90956563,- | |||
}} | |||
Revision as of 03:14, 13 September 2013
| Short description: | p@chr14:90956535..90956563, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr14:90956535..90956563, - |
| Coexpression cluster: | MCL_coexpression_mm9:52 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic lineage restricted progenitor cell | 8.28e-10 | 25 |
| lymphoid lineage restricted progenitor cell | 5.95e-08 | 12 |
| mature alpha-beta T cell | 8.83e-08 | 9 |
| alpha-beta T cell | 8.83e-08 | 9 |
| immature T cell | 8.83e-08 | 9 |
| mature T cell | 8.83e-08 | 9 |
| immature alpha-beta T cell | 8.83e-08 | 9 |
| leukocyte | 1.24e-07 | 17 |
| nongranular leukocyte | 1.24e-07 | 17 |
| connective tissue cell | 1.64e-07 | 46 |
| mesenchymal cell | 1.64e-07 | 46 |
| T cell | 2.93e-07 | 11 |
| pro-T cell | 2.93e-07 | 11 |
| CD4-positive, alpha-beta T cell | 4.19e-07 | 8 |
| lymphocyte | 5.94e-07 | 13 |
| common lymphoid progenitor | 5.94e-07 | 13 |
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 1.64e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
